RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 PRUNE2Q8WUY3 3088 aa7.73□□□□□ -1.17
RTF1-204ENST00000558117 EYSQ5T1H1 3165 aa7.72□□□□□ -1.17
RTF1-204ENST00000558117 MYH14Q7Z406 1995 aaKnown RBP7.72□□□□□ -1.17
RTF1-204ENST00000558117 TGM5O43548 720 aa7.72□□□□□ -1.17
RTF1-204ENST00000558117 B4GALT3O60512 393 aa7.72□□□□□ -1.17
RTF1-204ENST00000558117 HSP90B1P14625 803 aaKnown RBP7.72□□□□□ -1.17
RTF1-204ENST00000558117 ADCYAP1R1P41586 468 aa7.72□□□□□ -1.17
RTF1-204ENST00000558117 FNTBP49356 437 aa7.72□□□□□ -1.17
RTF1-204ENST00000558117 PLP2Q04941 152 aa7.72□□□□□ -1.17
RTF1-204ENST00000558117 MAP3K12Q12852 859 aa7.72□□□□□ -1.17
RTF1-204ENST00000558117 ESRP1Q6NXG1 681 aaKnown RBP7.72□□□□□ -1.17
RTF1-204ENST00000558117 ARHGEF18Q6ZSZ5 1173 aa7.72□□□□□ -1.17
RTF1-204ENST00000558117 CXXC5Q7LFL8 322 aaKnown RBP7.72□□□□□ -1.17
RTF1-204ENST00000558117 OTOP2Q7RTS6 562 aa7.72□□□□□ -1.17
RTF1-204ENST00000558117 MBD6Q96DN6 1003 aa7.72□□□□□ -1.17
RTF1-204ENST00000558117 C16orf92Q96LL3 132 aa7.72□□□□□ -1.17
RTF1-204ENST00000558117 CAAP1Q9H8G2 361 aa7.72□□□□□ -1.17
RTF1-204ENST00000558117 TOMM22Q9NS69 142 aa7.72□□□□□ -1.17
RTF1-204ENST00000558117 TMOD3Q9NYL9 352 aa7.72□□□□□ -1.17
RTF1-204ENST00000558117 AKAP11Q9UKA4 1901 aa7.72□□□□□ -1.17
RTF1-204ENST00000558117 AFDNP55196 1824 aaKnown RBP7.71□□□□□ -1.17
RTF1-204ENST00000558117 KRTAP4-8A0A0G2JLE6 195 aa7.71□□□□□ -1.18
RTF1-204ENST00000558117 LAMTOR5O43504 91 aa7.71□□□□□ -1.18
RTF1-204ENST00000558117 FKBP9O95302 570 aa7.71□□□□□ -1.18
RTF1-204ENST00000558117 CYP17A1P05093 508 aa7.71□□□□□ -1.18
RTF1-204ENST00000558117 ADCY8P40145 1251 aa7.71□□□□□ -1.18
RTF1-204ENST00000558117 KPNA1P52294 538 aaPredicted RBP7.71□□□□□ -1.18
RTF1-204ENST00000558117 IL2P60568 153 aa7.71□□□□□ -1.18
RTF1-204ENST00000558117 USP10Q14694 798 aaKnown RBP7.71□□□□□ -1.18
RTF1-204ENST00000558117 SART3Q15020 963 aaKnown RBP7.71□□□□□ -1.18
RTF1-204ENST00000558117 LCE4AQ5TA78 99 aa7.71□□□□□ -1.18
RTF1-204ENST00000558117 FKBP9P1Q75LS8 142 aa7.71□□□□□ -1.18
RTF1-204ENST00000558117 DDX46Q7L014 1031 aaKnown RBP7.71□□□□□ -1.18
RTF1-204ENST00000558117 GPR155Q7Z3F1 870 aa7.71□□□□□ -1.18
RTF1-204ENST00000558117 NME9Q86XW9 330 aa7.71□□□□□ -1.18
RTF1-204ENST00000558117 CHAC2Q8WUX2 184 aa7.71□□□□□ -1.18
RTF1-204ENST00000558117 AJUBAQ96IF1 538 aa7.71□□□□□ -1.18
RTF1-204ENST00000558117 OR10A5Q9H207 317 aa7.71□□□□□ -1.18
RTF1-204ENST00000558117 JADE2Q9NQC1 790 aa7.71□□□□□ -1.18
RTF1-204ENST00000558117 B8ZZF3 427 aa7.7□□□□□ -1.18
RTF1-204ENST00000558117 B4GALT4O60513 344 aa7.7□□□□□ -1.18
RTF1-204ENST00000558117 PLATP00750 562 aa7.7□□□□□ -1.18
RTF1-204ENST00000558117 HOXC9P31274 260 aa7.7□□□□□ -1.18
RTF1-204ENST00000558117 CRKLP46109 303 aaKnown RBP7.7□□□□□ -1.18
RTF1-204ENST00000558117 ID4P47928 161 aa7.7□□□□□ -1.18
RTF1-204ENST00000558117 STRN3Q13033 797 aa7.7□□□□□ -1.18
RTF1-204ENST00000558117 STILQ15468 1287 aa7.7□□□□□ -1.18
RTF1-204ENST00000558117 DLK2Q6UY11 383 aa7.7□□□□□ -1.18
RTF1-204ENST00000558117 EFHBQ8N7U6 833 aa7.7□□□□□ -1.18
RTF1-204ENST00000558117 BRIP1Q9BX63 1249 aa7.7□□□□□ -1.18
RTF1-204ENST00000558117 CARD11Q9BXL7 1154 aa7.7□□□□□ -1.18
RTF1-204ENST00000558117 FAM126AQ9BYI3 521 aaPredicted RBP7.7□□□□□ -1.18
RTF1-204ENST00000558117 ZMAT4Q9H898 229 aa7.7□□□□□ -1.18
RTF1-204ENST00000558117 PKD1L2Q7Z442 2459 aa7.7□□□□□ -1.18
RTF1-204ENST00000558117 COL5A3P25940 1745 aaPredicted RBP7.69□□□□□ -1.18
RTF1-204ENST00000558117 SLX4Q8IY92 1834 aa7.69□□□□□ -1.18
RTF1-204ENST00000558117 K7ESM1 405 aa7.69□□□□□ -1.18
RTF1-204ENST00000558117 HMGCRP04035 888 aa7.69□□□□□ -1.18
RTF1-204ENST00000558117 VIL1P09327 827 aaKnown RBP7.69□□□□□ -1.18
RTF1-204ENST00000558117 BPIP17213 487 aa7.69□□□□□ -1.18
RTF1-204ENST00000558117 CSF2RBP32927 897 aa7.69□□□□□ -1.18
RTF1-204ENST00000558117 IARSP41252 1262 aaKnown RBP7.69□□□□□ -1.18
RTF1-204ENST00000558117 LSSP48449 732 aa7.69□□□□□ -1.18
RTF1-204ENST00000558117 SMAD3P84022 425 aaKnown RBP7.69□□□□□ -1.18
RTF1-204ENST00000558117 CD83Q01151 205 aa7.69□□□□□ -1.18
RTF1-204ENST00000558117 ALDH6A1Q02252 535 aaKnown RBP7.69□□□□□ -1.18
RTF1-204ENST00000558117 DHCR24Q15392 516 aa7.69□□□□□ -1.18
RTF1-204ENST00000558117 CCDC93Q567U6 631 aa7.69□□□□□ -1.18
RTF1-204ENST00000558117 KANK2Q63ZY3 851 aa7.69□□□□□ -1.18
RTF1-204ENST00000558117 KRT26Q7Z3Y9 468 aa7.69□□□□□ -1.18
RTF1-204ENST00000558117 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.69□□□□□ -1.18
RTF1-204ENST00000558117 RTF1Q92541 710 aaKnown RBP7.69□□□□□ -1.18
RTF1-204ENST00000558117 KATNBL1Q9H079 304 aa7.69□□□□□ -1.18
RTF1-204ENST00000558117 MS4A5Q9H3V2 200 aa7.69□□□□□ -1.18
RTF1-204ENST00000558117 ADARB2Q9NS39 739 aaKnown RBP7.69□□□□□ -1.18
RTF1-204ENST00000558117 PRKAB1Q9Y478 270 aa7.69□□□□□ -1.18
RTF1-204ENST00000558117 ZNF831Q5JPB2 1677 aa7.69□□□□□ -1.18
RTF1-204ENST00000558117 CACNA1GO43497 2377 aa7.68□□□□□ -1.18
RTF1-204ENST00000558117 UBA6A0AVT1 1052 aaPredicted RBP7.68□□□□□ -1.18
RTF1-204ENST00000558117 LCHNA4D1U4 455 aa7.68□□□□□ -1.18
RTF1-204ENST00000558117 NEMP1O14524 444 aa7.68□□□□□ -1.18
RTF1-204ENST00000558117 PRLP01236 227 aa7.68□□□□□ -1.18
RTF1-204ENST00000558117 APEX1P27695 318 aaKnown RBP7.68□□□□□ -1.18
RTF1-204ENST00000558117 SOX5P35711 763 aa7.68□□□□□ -1.18
RTF1-204ENST00000558117 ETV4P43268 484 aa7.68□□□□□ -1.18
RTF1-204ENST00000558117 RGS3P49796 1198 aa7.68□□□□□ -1.18
RTF1-204ENST00000558117 KCNQ1P51787 676 aa7.68□□□□□ -1.18
RTF1-204ENST00000558117 PPP2CBP62714 309 aa7.68□□□□□ -1.18
RTF1-204ENST00000558117 PPP2CAP67775 309 aa7.68□□□□□ -1.18
RTF1-204ENST00000558117 SLC6A3Q01959 620 aa7.68□□□□□ -1.18
RTF1-204ENST00000558117 ROM1Q03395 351 aa7.68□□□□□ -1.18
RTF1-204ENST00000558117 TOP3AQ13472 1001 aaPredicted RBP7.68□□□□□ -1.18
RTF1-204ENST00000558117 EPHA7Q15375 998 aa7.68□□□□□ -1.18
RTF1-204ENST00000558117 TBC1D10BQ4KMP7 808 aaPredicted RBP7.68□□□□□ -1.18
RTF1-204ENST00000558117 GLB1LQ6UWU2 654 aa7.68□□□□□ -1.18
RTF1-204ENST00000558117 PASD1Q8IV76 773 aa7.68□□□□□ -1.18
RTF1-204ENST00000558117 AFAP1L2Q8N4X5 818 aa7.68□□□□□ -1.18
RTF1-204ENST00000558117 USP7Q93009 1102 aa7.68□□□□□ -1.18
RTF1-204ENST00000558117 FOXB1Q99853 325 aa7.68□□□□□ -1.18
RTF1-204ENST00000558117 R3HDMLQ9H3Y0 253 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms