RNA–Protein interactions for RNA: ENST00000557978.6

PBX4-202, Transcript of PBX homeobox 4, humanhuman

TSL 1 (best)

Gene PBX4, Length 1,416 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-202ENST00000557978 ATG2AQ2TAZ0 1938 aa18.3■□□□□ 0.52
PBX4-202ENST00000557978 PRRC2BQ5JSZ5 2229 aaKnown RBP18.3■□□□□ 0.52
PBX4-202ENST00000557978 RPN1P04843 607 aaKnown RBP18.3■□□□□ 0.52
PBX4-202ENST00000557978 LINC00271P0C7V0 271 aa18.3■□□□□ 0.52
PBX4-202ENST00000557978 HARSP12081 509 aaKnown RBP18.3■□□□□ 0.52
PBX4-202ENST00000557978 DPYDQ12882 1025 aa18.3■□□□□ 0.52
PBX4-202ENST00000557978 KMT5BQ4FZB7 885 aa18.3■□□□□ 0.52
PBX4-202ENST00000557978 LRRC55Q6ZSA7 311 aa18.3■□□□□ 0.52
PBX4-202ENST00000557978 ELOA2Q8IYF1 753 aaPredicted RBP18.3■□□□□ 0.52
PBX4-202ENST00000557978 THNSL1Q8IYQ7 743 aa18.3■□□□□ 0.52
PBX4-202ENST00000557978 ZNF507Q8TCN5 953 aa18.3■□□□□ 0.52
PBX4-202ENST00000557978 HPS3Q969F9 1004 aa18.3■□□□□ 0.52
PBX4-202ENST00000557978 ACAP3Q96P50 834 aa18.3■□□□□ 0.52
PBX4-202ENST00000557978 C11orf84Q9BUA3 381 aaPredicted RBP18.3■□□□□ 0.52
PBX4-202ENST00000557978 PRDM12Q9H4Q4 367 aa18.3■□□□□ 0.52
PBX4-202ENST00000557978 GDAQ9Y2T3 454 aa18.3■□□□□ 0.52
PBX4-202ENST00000557978 UBE4BO95155 1302 aa18.3■□□□□ 0.52
PBX4-202ENST00000557978 GOLGA6L22H0YM25 854 aa18.29■□□□□ 0.52
PBX4-202ENST00000557978 RECQL4O94761 1208 aa18.29■□□□□ 0.52
PBX4-202ENST00000557978 PRPF6O94906 941 aaKnown RBP18.29■□□□□ 0.52
PBX4-202ENST00000557978 PRR29P0C7W0 189 aa18.29■□□□□ 0.52
PBX4-202ENST00000557978 ALDH7A1P49419 539 aaKnown RBP18.29■□□□□ 0.52
PBX4-202ENST00000557978 SPRED2Q7Z698 418 aa18.29■□□□□ 0.52
PBX4-202ENST00000557978 SLC39A2Q9NP94 309 aa18.29■□□□□ 0.52
PBX4-202ENST00000557978 KLK14Q9P0G3 267 aa18.29■□□□□ 0.52
PBX4-202ENST00000557978 STYXL1Q9Y6J8 313 aa18.29■□□□□ 0.52
PBX4-202ENST00000557978 A0A0B4J269 797 aa18.28■□□□□ 0.52
PBX4-202ENST00000557978 H3BNC9 293 aa18.28■□□□□ 0.52
PBX4-202ENST00000557978 OGTO15294 1046 aa18.28■□□□□ 0.52
PBX4-202ENST00000557978 RHOBTB3O94955 611 aa18.28■□□□□ 0.52
PBX4-202ENST00000557978 POMCP01189 267 aa18.28■□□□□ 0.52
PBX4-202ENST00000557978 PPM1AP35813 382 aa18.28■□□□□ 0.52
PBX4-202ENST00000557978 SCNN1GP51170 649 aa18.28■□□□□ 0.52
PBX4-202ENST00000557978 OSTNP61366 133 aa18.28■□□□□ 0.52
PBX4-202ENST00000557978 KCNA1Q09470 495 aa18.28■□□□□ 0.52
PBX4-202ENST00000557978 KCNB1Q14721 858 aa18.28■□□□□ 0.52
PBX4-202ENST00000557978 KCNT2Q6UVM3 1135 aa18.28■□□□□ 0.52
PBX4-202ENST00000557978 EPM2AIP1Q7L775 607 aaPredicted RBP18.28■□□□□ 0.52
PBX4-202ENST00000557978 CEP120Q8N960 986 aa18.28■□□□□ 0.52
PBX4-202ENST00000557978 COLGALT1Q8NBJ5 622 aa18.28■□□□□ 0.52
PBX4-202ENST00000557978 ZFP42Q96MM3 310 aa18.28■□□□□ 0.52
PBX4-202ENST00000557978 ZNF558Q96NG5 402 aa18.28■□□□□ 0.52
PBX4-202ENST00000557978 CDX2Q99626 313 aaPredicted RBP18.28■□□□□ 0.52
PBX4-202ENST00000557978 MSTO1Q9BUK6 570 aa18.28■□□□□ 0.52
PBX4-202ENST00000557978 FGFBP2Q9BYJ0 223 aa18.28■□□□□ 0.52
PBX4-202ENST00000557978 ANKRD63C9JTQ0 380 aa18.27■□□□□ 0.52
PBX4-202ENST00000557978 ZC3H11AO75152 810 aaKnown RBP eCLIP18.27■□□□□ 0.52
PBX4-202ENST00000557978 KIF20AO95235 890 aa18.27■□□□□ 0.52
PBX4-202ENST00000557978 SMC2O95347 1197 aa18.27■□□□□ 0.52
PBX4-202ENST00000557978 LDHAP00338 332 aaKnown RBP18.27■□□□□ 0.52
PBX4-202ENST00000557978 THP07101 528 aa18.27■□□□□ 0.52
PBX4-202ENST00000557978 GARTP22102 1010 aa18.27■□□□□ 0.52
PBX4-202ENST00000557978 AFF1P51825 1210 aaKnown RBP18.27■□□□□ 0.52
PBX4-202ENST00000557978 GRIK3Q13003 919 aa18.27■□□□□ 0.52
PBX4-202ENST00000557978 GPM6BQ13491 265 aa18.27■□□□□ 0.52
PBX4-202ENST00000557978 SLC39A4Q6P5W5 647 aa18.27■□□□□ 0.52
PBX4-202ENST00000557978 GSTCDQ8NEC7 633 aa18.27■□□□□ 0.52
PBX4-202ENST00000557978 POMGNT1Q8WZA1 660 aa18.27■□□□□ 0.52
PBX4-202ENST00000557978 GSDMAQ96QA5 445 aa18.27■□□□□ 0.52
PBX4-202ENST00000557978 TMEM175Q9BSA9 504 aa18.27■□□□□ 0.52
PBX4-202ENST00000557978 HAPLN2Q9GZV7 340 aa18.27■□□□□ 0.52
PBX4-202ENST00000557978 GBP3Q9H0R5 595 aa18.27■□□□□ 0.52
PBX4-202ENST00000557978 NRDE2Q9H7Z3 1164 aa18.27■□□□□ 0.52
PBX4-202ENST00000557978 RMND1Q9NWS8 449 aa18.27■□□□□ 0.52
PBX4-202ENST00000557978 AGO2Q9UKV8 859 aaKnown RBP18.27■□□□□ 0.52
PBX4-202ENST00000557978 ALDH2P05091 517 aa18.26■□□□□ 0.51
PBX4-202ENST00000557978 CLTAP09496 248 aa18.26■□□□□ 0.51
PBX4-202ENST00000557978 BCAR1P56945 870 aa18.26■□□□□ 0.51
PBX4-202ENST00000557978 SNRPFP62306 86 aaKnown RBP18.26■□□□□ 0.51
PBX4-202ENST00000557978 STK4Q13043 487 aa18.26■□□□□ 0.51
PBX4-202ENST00000557978 PNOCQ13519 176 aa18.26■□□□□ 0.51
PBX4-202ENST00000557978 BMT2Q1RMZ1 405 aa18.26■□□□□ 0.51
PBX4-202ENST00000557978 KLHL23Q8NBE8 558 aa18.26■□□□□ 0.51
PBX4-202ENST00000557978 GLIS3Q8NEA6 775 aa18.26■□□□□ 0.51
PBX4-202ENST00000557978 SCFD1Q8WVM8 642 aa18.26■□□□□ 0.51
PBX4-202ENST00000557978 GUCD1Q96NT3 240 aa18.26■□□□□ 0.51
PBX4-202ENST00000557978 MIOSQ9NXC5 875 aa18.26■□□□□ 0.51
PBX4-202ENST00000557978 LMCD1Q9NZU5 365 aa18.26■□□□□ 0.51
PBX4-202ENST00000557978 HCSTQ9UBK5 93 aa18.26■□□□□ 0.51
PBX4-202ENST00000557978 EPOPA6NHQ4 379 aa18.25■□□□□ 0.51
PBX4-202ENST00000557978 KIAA0391O15091 583 aaKnown RBP18.25■□□□□ 0.51
PBX4-202ENST00000557978 DDHD2O94830 711 aa18.25■□□□□ 0.51
PBX4-202ENST00000557978 KRT17Q04695 432 aa18.25■□□□□ 0.51
PBX4-202ENST00000557978 ALKAL1Q6UXT8 129 aa18.25■□□□□ 0.51
PBX4-202ENST00000557978 ZNF280BQ86YH2 543 aa18.25■□□□□ 0.51
PBX4-202ENST00000557978 GDPD5Q8WTR4 605 aa18.25■□□□□ 0.51
PBX4-202ENST00000557978 MYLIPQ8WY64 445 aa18.25■□□□□ 0.51
PBX4-202ENST00000557978 GTPBP4Q9BZE4 634 aaKnown RBP18.25■□□□□ 0.51
PBX4-202ENST00000557978 LMAN2LQ9H0V9 348 aa18.25■□□□□ 0.51
PBX4-202ENST00000557978 PLEKHA5Q9HAU0 1116 aa18.25■□□□□ 0.51
PBX4-202ENST00000557978 SPG21Q9NZD8 308 aa18.25■□□□□ 0.51
PBX4-202ENST00000557978 CGNQ9P2M7 1197 aaKnown RBP18.25■□□□□ 0.51
PBX4-202ENST00000557978 TISP43B9A030 160 aa18.24■□□□□ 0.51
PBX4-202ENST00000557978 RFXAPO00287 272 aa18.24■□□□□ 0.51
PBX4-202ENST00000557978 GALTP07902 379 aa18.24■□□□□ 0.51
PBX4-202ENST00000557978 FOSL2P15408 326 aa18.24■□□□□ 0.51
PBX4-202ENST00000557978 POU3F3P20264 500 aaPredicted RBP18.24■□□□□ 0.51
PBX4-202ENST00000557978 POU5F1Q01860 360 aaKnown RBP18.24■□□□□ 0.51
PBX4-202ENST00000557978 PLCB3Q01970 1234 aa18.24■□□□□ 0.51
PBX4-202ENST00000557978 UBE3AQ05086 875 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms