RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 KCNT2Q6UVM3 1135 aa9.14□□□□□ -0.95
PSEN1-223ENST00000557511 STXBP4Q6ZWJ1 553 aa9.14□□□□□ -0.95
PSEN1-223ENST00000557511 DYMQ7RTS9 669 aa9.14□□□□□ -0.95
PSEN1-223ENST00000557511 MRPL10Q7Z7H8 261 aaKnown RBP9.14□□□□□ -0.95
PSEN1-223ENST00000557511 ZNF598Q86UK7 904 aaKnown RBP9.14□□□□□ -0.95
PSEN1-223ENST00000557511 FAM178BQ8IXR5 827 aa9.14□□□□□ -0.95
PSEN1-223ENST00000557511 CCDC65Q8IXS2 484 aa9.14□□□□□ -0.95
PSEN1-223ENST00000557511 CRIPAKQ8N1N5 446 aa9.14□□□□□ -0.95
PSEN1-223ENST00000557511 COLGALT1Q8NBJ5 622 aa9.14□□□□□ -0.95
PSEN1-223ENST00000557511 LPPQ93052 612 aa9.14□□□□□ -0.95
PSEN1-223ENST00000557511 DHX58Q96C10 678 aa9.14□□□□□ -0.95
PSEN1-223ENST00000557511 TMEM169Q96HH4 297 aa9.14□□□□□ -0.95
PSEN1-223ENST00000557511 REEP2Q9BRK0 252 aa9.14□□□□□ -0.95
PSEN1-223ENST00000557511 NTPCRQ9BSD7 190 aaKnown RBP9.14□□□□□ -0.95
PSEN1-223ENST00000557511 KIFC3Q9BVG8 833 aa9.14□□□□□ -0.95
PSEN1-223ENST00000557511 CCDC94Q9BW85 323 aaPredicted RBP9.14□□□□□ -0.95
PSEN1-223ENST00000557511 EIF2AQ9BY44 585 aaKnown RBP9.14□□□□□ -0.95
PSEN1-223ENST00000557511 MAGEF1Q9HAY2 307 aa9.14□□□□□ -0.95
PSEN1-223ENST00000557511 RC3H2Q9HBD1 1191 aaKnown RBP9.14□□□□□ -0.95
PSEN1-223ENST00000557511 TOPORSQ9NS56 1045 aaPredicted RBP9.14□□□□□ -0.95
PSEN1-223ENST00000557511 BLOC1S4Q9NUP1 217 aa9.14□□□□□ -0.95
PSEN1-223ENST00000557511 SPG21Q9NZD8 308 aa9.14□□□□□ -0.95
PSEN1-223ENST00000557511 SEL1LQ9UBV2 794 aa9.14□□□□□ -0.95
PSEN1-223ENST00000557511 RCOR1Q9UKL0 485 aa9.14□□□□□ -0.95
PSEN1-223ENST00000557511 EXOC7Q9UPT5 735 aa9.14□□□□□ -0.95
PSEN1-223ENST00000557511 MTCH2Q9Y6C9 303 aa9.14□□□□□ -0.95
PSEN1-223ENST00000557511 SIP14410 1827 aa9.14□□□□□ -0.95
PSEN1-223ENST00000557511 COL4A6Q14031 1691 aa9.13□□□□□ -0.95
PSEN1-223ENST00000557511 NPHP3-ACAD11A0A0J9YXS1 232 aa9.13□□□□□ -0.95
PSEN1-223ENST00000557511 FSD2A1L4K1 749 aa9.13□□□□□ -0.95
PSEN1-223ENST00000557511 NCK2O43639 380 aa9.13□□□□□ -0.95
PSEN1-223ENST00000557511 OFD1O75665 1012 aa9.13□□□□□ -0.95
PSEN1-223ENST00000557511 FGF18O76093 207 aa9.13□□□□□ -0.95
PSEN1-223ENST00000557511 ALDH2P05091 517 aa9.13□□□□□ -0.95
PSEN1-223ENST00000557511 POU3F3P20264 500 aaPredicted RBP9.13□□□□□ -0.95
PSEN1-223ENST00000557511 LIG4P49917 911 aa9.13□□□□□ -0.95
PSEN1-223ENST00000557511 MAPK7Q13164 816 aa9.13□□□□□ -0.95
PSEN1-223ENST00000557511 GIT2Q14161 759 aa9.13□□□□□ -0.95
PSEN1-223ENST00000557511 KYAT1Q16773 422 aa9.13□□□□□ -0.95
PSEN1-223ENST00000557511 AAK1Q2M2I8 961 aa9.13□□□□□ -0.95
PSEN1-223ENST00000557511 HERC4Q5GLZ8 1057 aaPredicted RBP9.13□□□□□ -0.95
PSEN1-223ENST00000557511 CLLU1OSQ5K130 101 aa9.13□□□□□ -0.95
PSEN1-223ENST00000557511 UBXN11Q5T124 520 aa9.13□□□□□ -0.95
PSEN1-223ENST00000557511 PDE12Q6L8Q7 609 aaKnown RBP9.13□□□□□ -0.95
PSEN1-223ENST00000557511 AGMOQ6ZNB7 445 aa9.13□□□□□ -0.95
PSEN1-223ENST00000557511 USP49Q70CQ1 688 aa9.13□□□□□ -0.95
PSEN1-223ENST00000557511 HAUS6Q7Z4H7 955 aa9.13□□□□□ -0.95
PSEN1-223ENST00000557511 CDR2LQ86X02 465 aaPredicted RBP9.13□□□□□ -0.95
PSEN1-223ENST00000557511 DAW1Q8N136 415 aa9.13□□□□□ -0.95
PSEN1-223ENST00000557511 KLHL23Q8NBE8 558 aa9.13□□□□□ -0.95
PSEN1-223ENST00000557511 POF1BQ8WVV4 589 aa9.13□□□□□ -0.95
PSEN1-223ENST00000557511 CCDC47Q96A33 483 aaKnown RBP9.13□□□□□ -0.95
PSEN1-223ENST00000557511 TNMDQ9H2S6 317 aa9.13□□□□□ -0.95
PSEN1-223ENST00000557511 PDZD7Q9H5P4 517 aa9.13□□□□□ -0.95
PSEN1-223ENST00000557511 NSUN3Q9H649 340 aaKnown RBP9.13□□□□□ -0.95
PSEN1-223ENST00000557511 ALG13Q9NP73 1137 aaKnown RBP9.13□□□□□ -0.95
PSEN1-223ENST00000557511 ARHGAP28Q9P2N2 729 aa9.13□□□□□ -0.95
PSEN1-223ENST00000557511 PCDHA7Q9UN72 937 aa9.13□□□□□ -0.95
PSEN1-223ENST00000557511 TNFSF13BQ9Y275 285 aa9.13□□□□□ -0.95
PSEN1-223ENST00000557511 SLC27A5Q9Y2P5 690 aa9.13□□□□□ -0.95
PSEN1-223ENST00000557511 LOXHD1Q8IVV2 1947 aa9.13□□□□□ -0.95
PSEN1-223ENST00000557511 ARID2Q68CP9 1835 aa9.12□□□□□ -0.95
PSEN1-223ENST00000557511 EPOPA6NHQ4 379 aa9.12□□□□□ -0.95
PSEN1-223ENST00000557511 HNRNPDLO14979 420 aaKnown RBP9.12□□□□□ -0.95
PSEN1-223ENST00000557511 POLR2DO15514 142 aaKnown RBP9.12□□□□□ -0.95
PSEN1-223ENST00000557511 CLDN3O15551 220 aa9.12□□□□□ -0.95
PSEN1-223ENST00000557511 TOM1L1O75674 476 aa9.12□□□□□ -0.95
PSEN1-223ENST00000557511 CSPG5O95196 566 aa9.12□□□□□ -0.95
PSEN1-223ENST00000557511 POMCP01189 267 aa9.12□□□□□ -0.95
PSEN1-223ENST00000557511 SRGAP2BP0DMP2 458 aa9.12□□□□□ -0.95
PSEN1-223ENST00000557511 MAPTP10636 758 aaKnown RBP9.12□□□□□ -0.95
PSEN1-223ENST00000557511 MCF2P10911 925 aa9.12□□□□□ -0.95
PSEN1-223ENST00000557511 HARSP12081 509 aaKnown RBP9.12□□□□□ -0.95
PSEN1-223ENST00000557511 ATF7P17544 494 aaPredicted RBP9.12□□□□□ -0.95
PSEN1-223ENST00000557511 AKAP5P24588 427 aa9.12□□□□□ -0.95
PSEN1-223ENST00000557511 MLH1P40692 756 aa9.12□□□□□ -0.95
PSEN1-223ENST00000557511 OR1G1P47890 313 aa9.12□□□□□ -0.95
PSEN1-223ENST00000557511 NCKAP1LP55160 1127 aa9.12□□□□□ -0.95
PSEN1-223ENST00000557511 BCAR1P56945 870 aa9.12□□□□□ -0.95
PSEN1-223ENST00000557511 ASIC1P78348 528 aa9.12□□□□□ -0.95
PSEN1-223ENST00000557511 GRIK3Q13003 919 aa9.12□□□□□ -0.95
PSEN1-223ENST00000557511 ALCAMQ13740 583 aa9.12□□□□□ -0.95
PSEN1-223ENST00000557511 ARSHQ5FYA8 562 aa9.12□□□□□ -0.95
PSEN1-223ENST00000557511 ADALQ6DHV7 355 aa9.12□□□□□ -0.95
PSEN1-223ENST00000557511 MPZL3Q6UWV2 235 aa9.12□□□□□ -0.95
PSEN1-223ENST00000557511 ZPBP2Q6X784 338 aa9.12□□□□□ -0.95
PSEN1-223ENST00000557511 EP400NLQ6ZTU2 488 aa9.12□□□□□ -0.95
PSEN1-223ENST00000557511 TMC7Q7Z402 723 aa9.12□□□□□ -0.95
PSEN1-223ENST00000557511 SPRED2Q7Z698 418 aa9.12□□□□□ -0.95
PSEN1-223ENST00000557511 ZBTB33Q86T24 672 aa9.12□□□□□ -0.95
PSEN1-223ENST00000557511 SMG8Q8ND04 991 aaKnown RBP9.12□□□□□ -0.95
PSEN1-223ENST00000557511 TMEM161BQ8NDZ6 487 aa9.12□□□□□ -0.95
PSEN1-223ENST00000557511 LEO1Q8WVC0 666 aaPredicted RBP9.12□□□□□ -0.95
PSEN1-223ENST00000557511 MRPS27Q92552 414 aaKnown RBP9.12□□□□□ -0.95
PSEN1-223ENST00000557511 GAD1Q99259 594 aa9.12□□□□□ -0.95
PSEN1-223ENST00000557511 SPSB2Q99619 263 aa9.12□□□□□ -0.95
PSEN1-223ENST00000557511 ACO2Q99798 780 aaKnown RBP9.12□□□□□ -0.95
PSEN1-223ENST00000557511 TMEM175Q9BSA9 504 aa9.12□□□□□ -0.95
PSEN1-223ENST00000557511 TARS2Q9BW92 718 aaKnown RBP9.12□□□□□ -0.95
PSEN1-223ENST00000557511 COLEC11Q9BWP8 271 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms