RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 GCLMP48507 274 aa15.71■□□□□ 0.11
ARHGEF40-208ENST00000557498 CTCFP49711 727 aaPredicted RBP15.71■□□□□ 0.11
ARHGEF40-208ENST00000557498 CLDN10P78369 228 aa15.71■□□□□ 0.11
ARHGEF40-208ENST00000557498 CCZ1BP86790 482 aa15.71■□□□□ 0.11
ARHGEF40-208ENST00000557498 CCZ1P86791 482 aaPredicted RBP15.71■□□□□ 0.11
ARHGEF40-208ENST00000557498 NCBP1Q09161 790 aaKnown RBP15.71■□□□□ 0.11
ARHGEF40-208ENST00000557498 MGAT3Q09327 533 aa15.71■□□□□ 0.11
ARHGEF40-208ENST00000557498 KYAT1Q16773 422 aa15.71■□□□□ 0.11
ARHGEF40-208ENST00000557498 SEZ6Q53EL9 994 aa15.71■□□□□ 0.11
ARHGEF40-208ENST00000557498 APBB1IPQ7Z5R6 666 aaPredicted RBP15.71■□□□□ 0.11
ARHGEF40-208ENST00000557498 CCDC112Q8NEF3 446 aa15.71■□□□□ 0.11
ARHGEF40-208ENST00000557498 PANX2Q96RD6 677 aa15.71■□□□□ 0.11
ARHGEF40-208ENST00000557498 FNBP1Q96RU3 617 aa15.71■□□□□ 0.11
ARHGEF40-208ENST00000557498 CGRRF1Q99675 332 aa15.71■□□□□ 0.11
ARHGEF40-208ENST00000557498 ADPGKQ9BRR6 497 aa15.71■□□□□ 0.11
ARHGEF40-208ENST00000557498 SEZ6LQ9BYH1 1024 aa15.71■□□□□ 0.11
ARHGEF40-208ENST00000557498 EDEM3Q9BZQ6 932 aa15.71■□□□□ 0.11
ARHGEF40-208ENST00000557498 SENP6Q9GZR1 1112 aaPredicted RBP15.71■□□□□ 0.11
ARHGEF40-208ENST00000557498 TMEM117Q9H0C3 514 aa15.71■□□□□ 0.11
ARHGEF40-208ENST00000557498 GANQ9H2C0 597 aa15.71■□□□□ 0.11
ARHGEF40-208ENST00000557498 TMEM8AQ9HCN3 771 aa15.71■□□□□ 0.11
ARHGEF40-208ENST00000557498 TRMT13Q9NUP7 481 aaKnown RBP15.71■□□□□ 0.11
ARHGEF40-208ENST00000557498 AGPAT5Q9NUQ2 364 aa15.71■□□□□ 0.11
ARHGEF40-208ENST00000557498 NOD1Q9Y239 953 aa15.71■□□□□ 0.11
ARHGEF40-208ENST00000557498 ZKSCAN5Q9Y2L8 839 aa15.71■□□□□ 0.11
ARHGEF40-208ENST00000557498 LUC7L2Q9Y383 392 aaKnown RBP15.71■□□□□ 0.11
ARHGEF40-208ENST00000557498 ANK1P16157 1881 aa15.7■□□□□ 0.1
ARHGEF40-208ENST00000557498 NRDCO43847 1150 aa15.7■□□□□ 0.1
ARHGEF40-208ENST00000557498 CTSHP09668 335 aa15.7■□□□□ 0.1
ARHGEF40-208ENST00000557498 HSPA1AP0DMV8 641 aaKnown RBP15.7■□□□□ 0.1
ARHGEF40-208ENST00000557498 HSPA1BP0DMV9 641 aaKnown RBP15.7■□□□□ 0.1
ARHGEF40-208ENST00000557498 DLATP10515 647 aaKnown RBP15.7■□□□□ 0.1
ARHGEF40-208ENST00000557498 SLC9A1P19634 815 aa15.7■□□□□ 0.1
ARHGEF40-208ENST00000557498 KRT9P35527 623 aa15.7■□□□□ 0.1
ARHGEF40-208ENST00000557498 THPOP40225 353 aa15.7■□□□□ 0.1
ARHGEF40-208ENST00000557498 WNT7BP56706 349 aa15.7■□□□□ 0.1
ARHGEF40-208ENST00000557498 ZBED6P86452 979 aa15.7■□□□□ 0.1
ARHGEF40-208ENST00000557498 CETN1Q12798 172 aa15.7■□□□□ 0.1
ARHGEF40-208ENST00000557498 SURF1Q15526 300 aa15.7■□□□□ 0.1
ARHGEF40-208ENST00000557498 PKN2Q16513 984 aaKnown RBP15.7■□□□□ 0.1
ARHGEF40-208ENST00000557498 TRIM71Q2Q1W2 868 aaKnown RBP15.7■□□□□ 0.1
ARHGEF40-208ENST00000557498 DCAF4L1Q3SXM0 396 aa15.7■□□□□ 0.1
ARHGEF40-208ENST00000557498 KRT39Q6A163 491 aa15.7■□□□□ 0.1
ARHGEF40-208ENST00000557498 DPY19L2P1Q6NXN4 242 aa15.7■□□□□ 0.1
ARHGEF40-208ENST00000557498 NOTUMQ6P988 496 aa15.7■□□□□ 0.1
ARHGEF40-208ENST00000557498 THNSL1Q8IYQ7 743 aa15.7■□□□□ 0.1
ARHGEF40-208ENST00000557498 CEP120Q8N960 986 aa15.7■□□□□ 0.1
ARHGEF40-208ENST00000557498 DHX38Q92620 1227 aaKnown RBP15.7■□□□□ 0.1
ARHGEF40-208ENST00000557498 INTS2Q9H0H0 1204 aaKnown RBP15.7■□□□□ 0.1
ARHGEF40-208ENST00000557498 PDE11AQ9HCR9 933 aa15.7■□□□□ 0.1
ARHGEF40-208ENST00000557498 TOPORSQ9NS56 1045 aaPredicted RBP15.7■□□□□ 0.1
ARHGEF40-208ENST00000557498 ABHD10Q9NUJ1 306 aa15.7■□□□□ 0.1
ARHGEF40-208ENST00000557498 CEP72Q9P209 647 aa15.7■□□□□ 0.1
ARHGEF40-208ENST00000557498 ARVCFO00192 962 aa15.69■□□□□ 0.1
ARHGEF40-208ENST00000557498 TULP1O00294 542 aaPredicted RBP15.69■□□□□ 0.1
ARHGEF40-208ENST00000557498 B4GALT4O60513 344 aa15.69■□□□□ 0.1
ARHGEF40-208ENST00000557498 CAND2O75155 1236 aa15.69■□□□□ 0.1
ARHGEF40-208ENST00000557498 NOL4O94818 638 aa15.69■□□□□ 0.1
ARHGEF40-208ENST00000557498 CHRNA1P02708 482 aa15.69■□□□□ 0.1
ARHGEF40-208ENST00000557498 CLTAP09496 248 aa15.69■□□□□ 0.1
ARHGEF40-208ENST00000557498 ACTN1P12814 892 aa15.69■□□□□ 0.1
ARHGEF40-208ENST00000557498 FECHP22830 423 aa15.69■□□□□ 0.1
ARHGEF40-208ENST00000557498 HOXA11P31270 313 aaPredicted RBP15.69■□□□□ 0.1
ARHGEF40-208ENST00000557498 LBX1P52954 281 aa15.69■□□□□ 0.1
ARHGEF40-208ENST00000557498 POU5F1Q01860 360 aaKnown RBP15.69■□□□□ 0.1
ARHGEF40-208ENST00000557498 EPC2Q52LR7 807 aa15.69■□□□□ 0.1
ARHGEF40-208ENST00000557498 KLHDC7AQ5VTJ3 777 aa15.69■□□□□ 0.1
ARHGEF40-208ENST00000557498 SLC27A1Q6PCB7 646 aa15.69■□□□□ 0.1
ARHGEF40-208ENST00000557498 TRIM65Q6PJ69 517 aa15.69■□□□□ 0.1
ARHGEF40-208ENST00000557498 ZSCAN30Q86W11 494 aa15.69■□□□□ 0.1
ARHGEF40-208ENST00000557498 FAM228AQ86W67 206 aa15.69■□□□□ 0.1
ARHGEF40-208ENST00000557498 TMEM139Q8IV31 216 aa15.69■□□□□ 0.1
ARHGEF40-208ENST00000557498 ZNF397Q8NF99 534 aaPredicted RBP15.69■□□□□ 0.1
ARHGEF40-208ENST00000557498 ARMC5Q96C12 935 aa15.69■□□□□ 0.1
ARHGEF40-208ENST00000557498 ZNF333Q96JL9 665 aa15.69■□□□□ 0.1
ARHGEF40-208ENST00000557498 POP1Q99575 1024 aaKnown RBP15.69■□□□□ 0.1
ARHGEF40-208ENST00000557498 TMX1Q9H3N1 280 aa15.69■□□□□ 0.1
ARHGEF40-208ENST00000557498 RPF1Q9H9Y2 349 aaKnown RBP15.69■□□□□ 0.1
ARHGEF40-208ENST00000557498 SIX2Q9NPC8 291 aa15.69■□□□□ 0.1
ARHGEF40-208ENST00000557498 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.69■□□□□ 0.1
ARHGEF40-208ENST00000557498 NOC2LQ9Y3T9 749 aaKnown RBP15.69■□□□□ 0.1
ARHGEF40-208ENST00000557498 RALGAPA2Q2PPJ7 1873 aa15.69■□□□□ 0.1
ARHGEF40-208ENST00000557498 NPTXRO95502 500 aa15.68■□□□□ 0.1
ARHGEF40-208ENST00000557498 STAG3L1P0CL83 205 aa15.68■□□□□ 0.1
ARHGEF40-208ENST00000557498 SKILP12757 684 aa15.68■□□□□ 0.1
ARHGEF40-208ENST00000557498 TNNI1P19237 187 aa15.68■□□□□ 0.1
ARHGEF40-208ENST00000557498 GRM5P41594 1212 aa15.68■□□□□ 0.1
ARHGEF40-208ENST00000557498 POLR2FP61218 127 aaKnown RBP15.68■□□□□ 0.1
ARHGEF40-208ENST00000557498 APBA1Q02410 837 aa15.68■□□□□ 0.1
ARHGEF40-208ENST00000557498 ENOX2Q16206 610 aaKnown RBP15.68■□□□□ 0.1
ARHGEF40-208ENST00000557498 FAM26DQ5JW98 314 aa15.68■□□□□ 0.1
ARHGEF40-208ENST00000557498 C15orf39Q6ZRI6 1047 aa15.68■□□□□ 0.1
ARHGEF40-208ENST00000557498 CACNA2D4Q7Z3S7 1137 aa15.68■□□□□ 0.1
ARHGEF40-208ENST00000557498 WDR49Q8IV35 697 aa15.68■□□□□ 0.1
ARHGEF40-208ENST00000557498 EHBP1Q8NDI1 1231 aa15.68■□□□□ 0.1
ARHGEF40-208ENST00000557498 OR8K1Q8NGG5 319 aa15.68■□□□□ 0.1
ARHGEF40-208ENST00000557498 LMO3Q8TAP4 145 aa15.68■□□□□ 0.1
ARHGEF40-208ENST00000557498 BAP1Q92560 729 aa15.68■□□□□ 0.1
ARHGEF40-208ENST00000557498 ZNF516Q92618 1163 aa15.68■□□□□ 0.1
ARHGEF40-208ENST00000557498 DNAJC7Q99615 494 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms