RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 MLH1P40692 756 aa15.31■□□□□ 0.04
VIPAS39-208ENST00000556412 SNRPFP62306 86 aaKnown RBP15.31■□□□□ 0.04
VIPAS39-208ENST00000556412 PAN2Q504Q3 1202 aaKnown RBP15.31■□□□□ 0.04
VIPAS39-208ENST00000556412 RASIP1Q5U651 963 aa15.31■□□□□ 0.04
VIPAS39-208ENST00000556412 CEP135Q66GS9 1140 aa15.31■□□□□ 0.04
VIPAS39-208ENST00000556412 ANKRD40Q6AI12 368 aa15.31■□□□□ 0.04
VIPAS39-208ENST00000556412 CENPPQ6IPU0 288 aa15.31■□□□□ 0.04
VIPAS39-208ENST00000556412 GLB1LQ6UWU2 654 aa15.31■□□□□ 0.04
VIPAS39-208ENST00000556412 AGMOQ6ZNB7 445 aa15.31■□□□□ 0.04
VIPAS39-208ENST00000556412 MRPL10Q7Z7H8 261 aaKnown RBP15.31■□□□□ 0.04
VIPAS39-208ENST00000556412 ZNF598Q86UK7 904 aaKnown RBP15.31■□□□□ 0.04
VIPAS39-208ENST00000556412 HERC6Q8IVU3 1022 aa15.31■□□□□ 0.04
VIPAS39-208ENST00000556412 YME1L1Q96TA2 773 aa15.31■□□□□ 0.04
VIPAS39-208ENST00000556412 CGNQ9P2M7 1197 aaKnown RBP15.31■□□□□ 0.04
VIPAS39-208ENST00000556412 TRAF3IP3Q9Y228 551 aa15.31■□□□□ 0.04
VIPAS39-208ENST00000556412 BICDL2A1A5D9 508 aa15.3■□□□□ 0.04
VIPAS39-208ENST00000556412 GRXCR1A8MXD5 290 aa15.3■□□□□ 0.04
VIPAS39-208ENST00000556412 CLTAP09496 248 aa15.3■□□□□ 0.04
VIPAS39-208ENST00000556412 CXCL8P10145 99 aa15.3■□□□□ 0.04
VIPAS39-208ENST00000556412 FAM109BQ6ICB4 259 aaPredicted RBP15.3■□□□□ 0.04
VIPAS39-208ENST00000556412 GPD1LQ8N335 351 aa15.3■□□□□ 0.04
VIPAS39-208ENST00000556412 XXYLT1Q8NBI6 393 aa15.3■□□□□ 0.04
VIPAS39-208ENST00000556412 ZFP42Q96MM3 310 aa15.3■□□□□ 0.04
VIPAS39-208ENST00000556412 GAD1Q99259 594 aa15.3■□□□□ 0.04
VIPAS39-208ENST00000556412 TOPORSQ9NS56 1045 aaPredicted RBP15.3■□□□□ 0.04
VIPAS39-208ENST00000556412 TBKBP1A7MCY6 615 aa15.29■□□□□ 0.04
VIPAS39-208ENST00000556412 HOXA2O43364 376 aa15.29■□□□□ 0.04
VIPAS39-208ENST00000556412 TLL1O43897 1013 aa15.29■□□□□ 0.04
VIPAS39-208ENST00000556412 EXTL3O43909 919 aa15.29■□□□□ 0.04
VIPAS39-208ENST00000556412 GJB5O95377 273 aa15.29■□□□□ 0.04
VIPAS39-208ENST00000556412 LDHAP00338 332 aaKnown RBP15.29■□□□□ 0.04
VIPAS39-208ENST00000556412 CCDC192P0DO97 292 aa15.29■□□□□ 0.04
VIPAS39-208ENST00000556412 RPL13P26373 211 aaKnown RBP15.29■□□□□ 0.04
VIPAS39-208ENST00000556412 RABGGTBP53611 331 aa15.29■□□□□ 0.04
VIPAS39-208ENST00000556412 LRRC63Q05C16 580 aa15.29■□□□□ 0.04
VIPAS39-208ENST00000556412 KYAT1Q16773 422 aa15.29■□□□□ 0.04
VIPAS39-208ENST00000556412 ZCWPW2Q504Y3 356 aa15.29■□□□□ 0.04
VIPAS39-208ENST00000556412 CLLU1OSQ5K130 101 aa15.29■□□□□ 0.04
VIPAS39-208ENST00000556412 C11orf57Q6ZUT1 292 aaPredicted RBP15.29■□□□□ 0.04
VIPAS39-208ENST00000556412 PHOSPHO2Q8TCD6 241 aa15.29■□□□□ 0.04
VIPAS39-208ENST00000556412 RPS6KC1Q96S38 1066 aa15.29■□□□□ 0.04
VIPAS39-208ENST00000556412 DNAJC25Q9H1X3 360 aa15.29■□□□□ 0.04
VIPAS39-208ENST00000556412 RPF1Q9H9Y2 349 aaKnown RBP15.29■□□□□ 0.04
VIPAS39-208ENST00000556412 UBN1Q9NPG3 1134 aa15.29■□□□□ 0.04
VIPAS39-208ENST00000556412 CPSF3Q9UKF6 684 aaKnown RBP15.29■□□□□ 0.04
VIPAS39-208ENST00000556412 COLQQ9Y215 455 aaPredicted RBP15.29■□□□□ 0.04
VIPAS39-208ENST00000556412 KIAA0391O15091 583 aaKnown RBP15.29■□□□□ 0.04
VIPAS39-208ENST00000556412 FAM189A1O60320 539 aa15.29■□□□□ 0.04
VIPAS39-208ENST00000556412 ADAM9Q13443 819 aa15.29■□□□□ 0.04
VIPAS39-208ENST00000556412 EDRF1Q3B7T1 1238 aa15.29■□□□□ 0.04
VIPAS39-208ENST00000556412 PRPF38BQ5VTL8 546 aaKnown RBP15.29■□□□□ 0.04
VIPAS39-208ENST00000556412 CBWD2Q8IUF1 395 aa15.29■□□□□ 0.04
VIPAS39-208ENST00000556412 RBAKQ9NYW8 714 aaPredicted RBP15.29■□□□□ 0.04
VIPAS39-208ENST00000556412 RWDD2AQ9UIY3 292 aa15.29■□□□□ 0.04
VIPAS39-208ENST00000556412 FRMD4BQ9Y2L6 1034 aa15.29■□□□□ 0.04
VIPAS39-208ENST00000556412 GIT1Q9Y2X7 761 aa15.29■□□□□ 0.04
VIPAS39-208ENST00000556412 ARL5CA6NH57 179 aa15.28■□□□□ 0.04
VIPAS39-208ENST00000556412 DGKIO75912 1065 aa15.28■□□□□ 0.04
VIPAS39-208ENST00000556412 POMCP01189 267 aa15.28■□□□□ 0.04
VIPAS39-208ENST00000556412 SCNN1GP51170 649 aa15.28■□□□□ 0.04
VIPAS39-208ENST00000556412 AFF1P51825 1210 aaKnown RBP15.28■□□□□ 0.04
VIPAS39-208ENST00000556412 PPP2R3AQ06190 1150 aa15.28■□□□□ 0.04
VIPAS39-208ENST00000556412 SPAG1Q07617 926 aa15.28■□□□□ 0.04
VIPAS39-208ENST00000556412 ENOX2Q16206 610 aaKnown RBP15.28■□□□□ 0.04
VIPAS39-208ENST00000556412 SNRNP35Q16560 246 aaKnown RBP15.28■□□□□ 0.04
VIPAS39-208ENST00000556412 TPD52L1Q16890 204 aaPredicted RBP15.28■□□□□ 0.04
VIPAS39-208ENST00000556412 ANO6Q4KMQ2 910 aa15.28■□□□□ 0.04
VIPAS39-208ENST00000556412 GLRA4Q5JXX5 417 aa15.28■□□□□ 0.04
VIPAS39-208ENST00000556412 CRELD2Q6UXH1 353 aaPredicted RBP15.28■□□□□ 0.04
VIPAS39-208ENST00000556412 C12orf56Q8IXR9 622 aa15.28■□□□□ 0.04
VIPAS39-208ENST00000556412 CRIPAKQ8N1N5 446 aa15.28■□□□□ 0.04
VIPAS39-208ENST00000556412 CSGALNACT2Q8N6G5 542 aa15.28■□□□□ 0.04
VIPAS39-208ENST00000556412 URGCPQ8TCY9 931 aa15.28■□□□□ 0.04
VIPAS39-208ENST00000556412 CXCL16Q9H2A7 254 aa15.28■□□□□ 0.04
VIPAS39-208ENST00000556412 KIAA1586Q9HCI6 787 aa15.28■□□□□ 0.04
VIPAS39-208ENST00000556412 ZNF233A6NK53 670 aa15.27■□□□□ 0.04
VIPAS39-208ENST00000556412 CETN3O15182 167 aa15.27■□□□□ 0.04
VIPAS39-208ENST00000556412 OFD1O75665 1012 aa15.27■□□□□ 0.04
VIPAS39-208ENST00000556412 CASP4P49662 377 aa15.27■□□□□ 0.04
VIPAS39-208ENST00000556412 FKBP3Q00688 224 aaKnown RBP15.27■□□□□ 0.04
VIPAS39-208ENST00000556412 RNASELQ05823 741 aaKnown RBP15.27■□□□□ 0.04
VIPAS39-208ENST00000556412 BTG3Q14201 252 aaPredicted RBP15.27■□□□□ 0.04
VIPAS39-208ENST00000556412 NOMO2Q5JPE7 1267 aa15.27■□□□□ 0.04
VIPAS39-208ENST00000556412 TTI2Q6NXR4 508 aa15.27■□□□□ 0.04
VIPAS39-208ENST00000556412 SNX27Q96L92 541 aa15.27■□□□□ 0.04
VIPAS39-208ENST00000556412 CASD1Q96PB1 797 aa15.27■□□□□ 0.04
VIPAS39-208ENST00000556412 TMEM117Q9H0C3 514 aa15.27■□□□□ 0.04
VIPAS39-208ENST00000556412 MYOGP15173 224 aa15.27■□□□□ 0.03
VIPAS39-208ENST00000556412 ERCC5P28715 1186 aaPredicted RBP15.27■□□□□ 0.03
VIPAS39-208ENST00000556412 SLC10A6Q3KNW5 377 aa15.27■□□□□ 0.03
VIPAS39-208ENST00000556412 SPOUT1Q5T280 376 aaKnown RBP15.27■□□□□ 0.03
VIPAS39-208ENST00000556412 SLC9A9Q8IVB4 645 aa15.27■□□□□ 0.03
VIPAS39-208ENST00000556412 CCDC127Q96BQ5 260 aa15.27■□□□□ 0.03
VIPAS39-208ENST00000556412 RAD9AQ99638 391 aa15.27■□□□□ 0.03
VIPAS39-208ENST00000556412 DUSP9Q99956 384 aaKnown RBP15.27■□□□□ 0.03
VIPAS39-208ENST00000556412 PRO3102Q9H379 93 aa15.27■□□□□ 0.03
VIPAS39-208ENST00000556412 DMAC2Q9NW81 257 aa15.27■□□□□ 0.03
VIPAS39-208ENST00000556412 INSL6Q9Y581 213 aa15.27■□□□□ 0.03
VIPAS39-208ENST00000556412 TET1Q8NFU7 2136 aa15.26■□□□□ 0.03
VIPAS39-208ENST00000556412 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms