RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 TRAF7Q6Q0C0 670 aa12.01□□□□□ -0.49
TMEM260-208ENST00000555905 FAM43BQ6ZT52 329 aaPredicted RBP12.01□□□□□ -0.49
TMEM260-208ENST00000555905 UBE2Q1Q7Z7E8 422 aa12.01□□□□□ -0.49
TMEM260-208ENST00000555905 CDR2LQ86X02 465 aaPredicted RBP12.01□□□□□ -0.49
TMEM260-208ENST00000555905 CBWD2Q8IUF1 395 aa12.01□□□□□ -0.49
TMEM260-208ENST00000555905 AGO3Q9H9G7 860 aaKnown RBP12.01□□□□□ -0.49
TMEM260-208ENST00000555905 TAB2Q9NYJ8 693 aa12.01□□□□□ -0.49
TMEM260-208ENST00000555905 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.01□□□□□ -0.49
TMEM260-208ENST00000555905 TANC1Q9C0D5 1861 aa12.01□□□□□ -0.49
TMEM260-208ENST00000555905 LRRC10BA6NIK2 292 aa12□□□□□ -0.49
TMEM260-208ENST00000555905 PES1O00541 588 aaKnown RBP12□□□□□ -0.49
TMEM260-208ENST00000555905 NPTXRO95502 500 aa12□□□□□ -0.49
TMEM260-208ENST00000555905 CLTAP09496 248 aa12□□□□□ -0.49
TMEM260-208ENST00000555905 ACOT2P49753 483 aa12□□□□□ -0.49
TMEM260-208ENST00000555905 PSEN1P49768 467 aa12□□□□□ -0.49
TMEM260-208ENST00000555905 COPB1P53618 953 aaKnown RBP12□□□□□ -0.49
TMEM260-208ENST00000555905 CYP24A1Q07973 514 aa12□□□□□ -0.49
TMEM260-208ENST00000555905 BFSP1Q12934 665 aa12□□□□□ -0.49
TMEM260-208ENST00000555905 PDAP1Q13442 181 aaKnown RBP12□□□□□ -0.49
TMEM260-208ENST00000555905 DCAF17Q5H9S7 520 aaPredicted RBP12□□□□□ -0.49
TMEM260-208ENST00000555905 TCERG1LQ5VWI1 586 aa12□□□□□ -0.49
TMEM260-208ENST00000555905 TRIM59Q8IWR1 403 aa12□□□□□ -0.49
TMEM260-208ENST00000555905 THNSL1Q8IYQ7 743 aa12□□□□□ -0.49
TMEM260-208ENST00000555905 ZSWIM2Q8NEG5 633 aa12□□□□□ -0.49
TMEM260-208ENST00000555905 MFSD14AQ96MC6 490 aa12□□□□□ -0.49
TMEM260-208ENST00000555905 IFIH1Q9BYX4 1025 aaKnown RBP12□□□□□ -0.49
TMEM260-208ENST00000555905 PPP1R12CQ9BZL4 782 aa12□□□□□ -0.49
TMEM260-208ENST00000555905 VPS16Q9H269 839 aa12□□□□□ -0.49
TMEM260-208ENST00000555905 PRDM5Q9NQX1 630 aaPredicted RBP12□□□□□ -0.49
TMEM260-208ENST00000555905 RBAKQ9NYW8 714 aaPredicted RBP12□□□□□ -0.49
TMEM260-208ENST00000555905 IFNKQ9P0W0 207 aa12□□□□□ -0.49
TMEM260-208ENST00000555905 TBX21Q9UL17 535 aa12□□□□□ -0.49
TMEM260-208ENST00000555905 RIOK3O14730 519 aaKnown RBP11.99□□□□□ -0.49
TMEM260-208ENST00000555905 FAM189A1O60320 539 aa11.99□□□□□ -0.49
TMEM260-208ENST00000555905 STX10O60499 249 aa11.99□□□□□ -0.49
TMEM260-208ENST00000555905 ADRB2P07550 413 aa11.99□□□□□ -0.49
TMEM260-208ENST00000555905 STAG3L1P0CL83 205 aa11.99□□□□□ -0.49
TMEM260-208ENST00000555905 GRM5P41594 1212 aa11.99□□□□□ -0.49
TMEM260-208ENST00000555905 VAMP7P51809 220 aa11.99□□□□□ -0.49
TMEM260-208ENST00000555905 OSTNP61366 133 aa11.99□□□□□ -0.49
TMEM260-208ENST00000555905 POU5F1Q01860 360 aaKnown RBP11.99□□□□□ -0.49
TMEM260-208ENST00000555905 ENPEPQ07075 957 aa11.99□□□□□ -0.49
TMEM260-208ENST00000555905 MBTPS1Q14703 1052 aa11.99□□□□□ -0.49
TMEM260-208ENST00000555905 SURF1Q15526 300 aa11.99□□□□□ -0.49
TMEM260-208ENST00000555905 VWA3BQ502W6 1294 aa11.99□□□□□ -0.49
TMEM260-208ENST00000555905 SEZ6Q53EL9 994 aa11.99□□□□□ -0.49
TMEM260-208ENST00000555905 COL13A1Q5TAT6 717 aaPredicted RBP11.99□□□□□ -0.49
TMEM260-208ENST00000555905 CRELD2Q6UXH1 353 aaPredicted RBP11.99□□□□□ -0.49
TMEM260-208ENST00000555905 HACE1Q8IYU2 909 aa11.99□□□□□ -0.49
TMEM260-208ENST00000555905 TMC2Q8TDI7 906 aa11.99□□□□□ -0.49
TMEM260-208ENST00000555905 SLC39A7Q92504 469 aa11.99□□□□□ -0.49
TMEM260-208ENST00000555905 SEPT8Q92599 483 aa11.99□□□□□ -0.49
TMEM260-208ENST00000555905 CCDC127Q96BQ5 260 aa11.99□□□□□ -0.49
TMEM260-208ENST00000555905 BORCS6Q96GS4 357 aa11.99□□□□□ -0.49
TMEM260-208ENST00000555905 ABHD8Q96I13 439 aa11.99□□□□□ -0.49
TMEM260-208ENST00000555905 ACAP3Q96P50 834 aa11.99□□□□□ -0.49
TMEM260-208ENST00000555905 FNBP1Q96RU3 617 aa11.99□□□□□ -0.49
TMEM260-208ENST00000555905 CCDC94Q9BW85 323 aaPredicted RBP11.99□□□□□ -0.49
TMEM260-208ENST00000555905 FTHL17Q9BXU8 183 aa11.99□□□□□ -0.49
TMEM260-208ENST00000555905 EIF2AQ9BY44 585 aaKnown RBP11.99□□□□□ -0.49
TMEM260-208ENST00000555905 OSBPL7Q9BZF2 842 aa11.99□□□□□ -0.49
TMEM260-208ENST00000555905 RPF1Q9H9Y2 349 aaKnown RBP11.99□□□□□ -0.49
TMEM260-208ENST00000555905 METRNQ9UJH8 293 aa11.99□□□□□ -0.49
TMEM260-208ENST00000555905 CPSF3Q9UKF6 684 aaKnown RBP11.99□□□□□ -0.49
TMEM260-208ENST00000555905 UMODL1Q5DID0 1318 aa11.98□□□□□ -0.49
TMEM260-208ENST00000555905 A0A1B0GTH6 734 aa11.98□□□□□ -0.49
TMEM260-208ENST00000555905 LGALS16A8MUM7 142 aa11.98□□□□□ -0.49
TMEM260-208ENST00000555905 KIAA0355O15063 1070 aa11.98□□□□□ -0.49
TMEM260-208ENST00000555905 AP5Z1O43299 807 aa11.98□□□□□ -0.49
TMEM260-208ENST00000555905 NBNO60934 754 aa11.98□□□□□ -0.49
TMEM260-208ENST00000555905 IL18RAPO95256 599 aa11.98□□□□□ -0.49
TMEM260-208ENST00000555905 ADCY5O95622 1261 aa11.98□□□□□ -0.49
TMEM260-208ENST00000555905 TIMP1P01033 207 aa11.98□□□□□ -0.49
TMEM260-208ENST00000555905 AFPP02771 609 aaKnown RBP11.98□□□□□ -0.49
TMEM260-208ENST00000555905 SKIP12755 728 aa11.98□□□□□ -0.49
TMEM260-208ENST00000555905 CYP2C18P33260 490 aa11.98□□□□□ -0.49
TMEM260-208ENST00000555905 RFC2P35250 354 aa11.98□□□□□ -0.49
TMEM260-208ENST00000555905 TNFSF9P41273 254 aa11.98□□□□□ -0.49
TMEM260-208ENST00000555905 RAB27AP51159 221 aa11.98□□□□□ -0.49
TMEM260-208ENST00000555905 ZNF75DP51815 510 aa11.98□□□□□ -0.49
TMEM260-208ENST00000555905 YARSP54577 528 aaKnown RBP11.98□□□□□ -0.49
TMEM260-208ENST00000555905 CCL23P55773 120 aa11.98□□□□□ -0.49
TMEM260-208ENST00000555905 UBXN1Q04323 297 aa11.98□□□□□ -0.49
TMEM260-208ENST00000555905 PSMD6Q15008 389 aa11.98□□□□□ -0.49
TMEM260-208ENST00000555905 ZBTB41Q5SVQ8 909 aa11.98□□□□□ -0.49
TMEM260-208ENST00000555905 UBXN11Q5T124 520 aa11.98□□□□□ -0.49
TMEM260-208ENST00000555905 FKBP15Q5T1M5 1219 aa11.98□□□□□ -0.49
TMEM260-208ENST00000555905 APTXQ7Z2E3 356 aaKnown RBP11.98□□□□□ -0.49
TMEM260-208ENST00000555905 BRSK2Q8IWQ3 736 aa11.98□□□□□ -0.49
TMEM260-208ENST00000555905 APBB2Q92870 758 aa11.98□□□□□ -0.49
TMEM260-208ENST00000555905 NAP1L5Q96NT1 182 aaPredicted RBP11.98□□□□□ -0.49
TMEM260-208ENST00000555905 ADAM2Q99965 735 aa11.98□□□□□ -0.49
TMEM260-208ENST00000555905 XPO4Q9C0E2 1151 aaKnown RBP11.98□□□□□ -0.49
TMEM260-208ENST00000555905 TMX1Q9H3N1 280 aa11.98□□□□□ -0.49
TMEM260-208ENST00000555905 NDST4Q9H3R1 872 aa11.98□□□□□ -0.49
TMEM260-208ENST00000555905 RTN4Q9NQC3 1192 aaKnown RBP11.98□□□□□ -0.49
TMEM260-208ENST00000555905 PRKAG2Q9UGJ0 569 aa11.98□□□□□ -0.49
TMEM260-208ENST00000555905 PCDHB2Q9Y5E7 798 aa11.98□□□□□ -0.49
TMEM260-208ENST00000555905 CCDC85CA6NKD9 419 aa11.97□□□□□ -0.49
TMEM260-208ENST00000555905 N4BP1O75113 896 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms