RNA–Protein interactions for RNA: ENST00000555759.1

SYNE3-204, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 2

Gene SYNE3, Length 5,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-204ENST00000555759 KLRC1P26715 233 aa18.5■□□□□ 0.55
SYNE3-204ENST00000555759 TRIM65Q6PJ69 517 aa18.5■□□□□ 0.55
SYNE3-204ENST00000555759 MTHFD1LQ6UB35 978 aa18.5■□□□□ 0.55
SYNE3-204ENST00000555759 B4GALNT2Q8NHY0 566 aa18.5■□□□□ 0.55
SYNE3-204ENST00000555759 HEXIM2Q96MH2 286 aaKnown RBP18.5■□□□□ 0.55
SYNE3-204ENST00000555759 FAM210AQ96ND0 272 aa18.5■□□□□ 0.55
SYNE3-204ENST00000555759 MSTO1Q9BUK6 570 aa18.5■□□□□ 0.55
SYNE3-204ENST00000555759 LRCH1Q9Y2L9 728 aa18.5■□□□□ 0.55
SYNE3-204ENST00000555759 ERVV-1B6SEH8 477 aa18.5■□□□□ 0.55
SYNE3-204ENST00000555759 SERPINI2O75830 405 aa18.5■□□□□ 0.55
SYNE3-204ENST00000555759 S100A5P33763 92 aa18.5■□□□□ 0.55
SYNE3-204ENST00000555759 ZNF555Q8NEP9 628 aa18.5■□□□□ 0.55
SYNE3-204ENST00000555759 CLMNQ96JQ2 1002 aa18.5■□□□□ 0.55
SYNE3-204ENST00000555759 RPS6KC1Q96S38 1066 aa18.5■□□□□ 0.55
SYNE3-204ENST00000555759 TMEM2Q9UHN6 1383 aa18.5■□□□□ 0.55
SYNE3-204ENST00000555759 WDR17Q8IZU2 1322 aa18.5■□□□□ 0.55
SYNE3-204ENST00000555759 SHROOM2Q13796 1616 aa18.5■□□□□ 0.55
SYNE3-204ENST00000555759 PNPLA6Q8IY17 1366 aa18.5■□□□□ 0.55
SYNE3-204ENST00000555759 POTEB3A0JP26 581 aa18.5■□□□□ 0.55
SYNE3-204ENST00000555759 PEX3P56589 373 aa18.5■□□□□ 0.55
SYNE3-204ENST00000555759 MECOMQ03112 1051 aa18.5■□□□□ 0.55
SYNE3-204ENST00000555759 ZBTB41Q5SVQ8 909 aa18.5■□□□□ 0.55
SYNE3-204ENST00000555759 POTEBQ6S5H4 581 aa18.5■□□□□ 0.55
SYNE3-204ENST00000555759 FAM192AQ9GZU8 254 aa18.5■□□□□ 0.55
SYNE3-204ENST00000555759 KLHL8Q9P2G9 620 aaPredicted RBP18.5■□□□□ 0.55
SYNE3-204ENST00000555759 ABCB11O95342 1321 aa18.5■□□□□ 0.55
SYNE3-204ENST00000555759 SEC24DO94855 1032 aaPredicted RBP18.5■□□□□ 0.55
SYNE3-204ENST00000555759 PRELPP51888 382 aa18.5■□□□□ 0.55
SYNE3-204ENST00000555759 MDH1BQ5I0G3 518 aa18.5■□□□□ 0.55
SYNE3-204ENST00000555759 BFARQ9NZS9 450 aa18.5■□□□□ 0.55
SYNE3-204ENST00000555759 MAGED2Q9UNF1 606 aaPredicted RBP18.5■□□□□ 0.55
SYNE3-204ENST00000555759 HEG1Q9ULI3 1381 aa18.49■□□□□ 0.55
SYNE3-204ENST00000555759 ZBTB5O15062 677 aa18.49■□□□□ 0.55
SYNE3-204ENST00000555759 TMEM270Q6UE05 265 aa18.49■□□□□ 0.55
SYNE3-204ENST00000555759 CDR2LQ86X02 465 aaPredicted RBP18.49■□□□□ 0.55
SYNE3-204ENST00000555759 APOL6Q9BWW8 343 aa18.49■□□□□ 0.55
SYNE3-204ENST00000555759 IVNS1ABPQ9Y6Y0 642 aa18.49■□□□□ 0.55
SYNE3-204ENST00000555759 PRAMEP78395 509 aa18.49■□□□□ 0.55
SYNE3-204ENST00000555759 ZNF200P98182 395 aaPredicted RBP18.49■□□□□ 0.55
SYNE3-204ENST00000555759 PRPF39Q86UA1 669 aaKnown RBP18.49■□□□□ 0.55
SYNE3-204ENST00000555759 KCNB2Q92953 911 aa18.49■□□□□ 0.55
SYNE3-204ENST00000555759 CELF4Q9BZC1 486 aaKnown RBP18.49■□□□□ 0.55
SYNE3-204ENST00000555759 LRRC4Q9HBW1 653 aa18.49■□□□□ 0.55
SYNE3-204ENST00000555759 APEX2Q9UBZ4 518 aa18.49■□□□□ 0.55
SYNE3-204ENST00000555759 AURKCQ9UQB9 309 aa18.49■□□□□ 0.55
SYNE3-204ENST00000555759 UBE4BO95155 1302 aa18.49■□□□□ 0.55
SYNE3-204ENST00000555759 FKBP6O75344 327 aa18.49■□□□□ 0.55
SYNE3-204ENST00000555759 UBXN2AP68543 259 aa18.49■□□□□ 0.55
SYNE3-204ENST00000555759 CCDC15Q0P6D6 951 aa18.49■□□□□ 0.55
SYNE3-204ENST00000555759 NLRP9Q7RTR0 991 aa18.49■□□□□ 0.55
SYNE3-204ENST00000555759 ANKMY2Q8IV38 441 aa18.49■□□□□ 0.55
SYNE3-204ENST00000555759 RYBPQ8N488 228 aaPredicted RBP18.49■□□□□ 0.55
SYNE3-204ENST00000555759 ZKSCAN4Q969J2 545 aaPredicted RBP18.49■□□□□ 0.55
SYNE3-204ENST00000555759 TMEM47Q9BQJ4 181 aa18.49■□□□□ 0.55
SYNE3-204ENST00000555759 BEGAINQ9BUH8 593 aa18.49■□□□□ 0.55
SYNE3-204ENST00000555759 ASPSCR1Q9BZE9 553 aa18.49■□□□□ 0.55
SYNE3-204ENST00000555759 RGL1Q9NZL6 768 aa18.49■□□□□ 0.55
SYNE3-204ENST00000555759 KIF1BO60333 1816 aa18.49■□□□□ 0.55
SYNE3-204ENST00000555759 GOLGA8RI6L899 631 aa18.49■□□□□ 0.55
SYNE3-204ENST00000555759 CLDN3O15551 220 aa18.49■□□□□ 0.55
SYNE3-204ENST00000555759 FDPSP14324 419 aaKnown RBP18.49■□□□□ 0.55
SYNE3-204ENST00000555759 PTPN4P29074 926 aa18.49■□□□□ 0.55
SYNE3-204ENST00000555759 PPP6R3Q5H9R7 873 aaPredicted RBP18.49■□□□□ 0.55
SYNE3-204ENST00000555759 HEATR6Q6AI08 1181 aaKnown RBP18.49■□□□□ 0.55
SYNE3-204ENST00000555759 PRUNE1Q86TP1 453 aa18.49■□□□□ 0.55
SYNE3-204ENST00000555759 RBBP8NLQ8NC74 664 aaPredicted RBP18.49■□□□□ 0.55
SYNE3-204ENST00000555759 DDX17Q92841 729 aaKnown RBP18.49■□□□□ 0.55
SYNE3-204ENST00000555759 ADNPQ9H2P0 1102 aa18.49■□□□□ 0.55
SYNE3-204ENST00000555759 DHX36Q9H2U1 1008 aaKnown RBP18.49■□□□□ 0.55
SYNE3-204ENST00000555759 HEY1Q9Y5J3 304 aa18.49■□□□□ 0.55
SYNE3-204ENST00000555759 UBOX5O94941 541 aa18.48■□□□□ 0.55
SYNE3-204ENST00000555759 PMLP29590 882 aa18.48■□□□□ 0.55
SYNE3-204ENST00000555759 MAPK7Q13164 816 aa18.48■□□□□ 0.55
SYNE3-204ENST00000555759 WLSQ5T9L3 541 aa18.48■□□□□ 0.55
SYNE3-204ENST00000555759 PLD3Q8IV08 490 aa18.48■□□□□ 0.55
SYNE3-204ENST00000555759 HAO1Q9UJM8 370 aa18.48■□□□□ 0.55
SYNE3-204ENST00000555759 PSAPP07602 524 aa18.48■□□□□ 0.55
SYNE3-204ENST00000555759 CACNA2D1P54289 1103 aa18.48■□□□□ 0.55
SYNE3-204ENST00000555759 BCAR1P56945 870 aa18.48■□□□□ 0.55
SYNE3-204ENST00000555759 NUP107P57740 925 aa18.48■□□□□ 0.55
SYNE3-204ENST00000555759 DNAJC3Q13217 504 aa18.48■□□□□ 0.55
SYNE3-204ENST00000555759 ZNF667Q5HYK9 610 aa18.48■□□□□ 0.55
SYNE3-204ENST00000555759 ACTRT1Q8TDG2 376 aa18.48■□□□□ 0.55
SYNE3-204ENST00000555759 TEKT2Q9UIF3 430 aa18.48■□□□□ 0.55
SYNE3-204ENST00000555759 PXDNLA1KZ92 1463 aa18.48■□□□□ 0.55
SYNE3-204ENST00000555759 AKAP10O43572 662 aa18.48■□□□□ 0.55
SYNE3-204ENST00000555759 RARGP13631 454 aa18.48■□□□□ 0.55
SYNE3-204ENST00000555759 CALB2P22676 271 aa18.48■□□□□ 0.55
SYNE3-204ENST00000555759 GNA15P30679 374 aa18.48■□□□□ 0.55
SYNE3-204ENST00000555759 GUCY1A2P33402 732 aa18.48■□□□□ 0.55
SYNE3-204ENST00000555759 ABCE1P61221 599 aaKnown RBP18.48■□□□□ 0.55
SYNE3-204ENST00000555759 CDO1Q16878 200 aa18.48■□□□□ 0.55
SYNE3-204ENST00000555759 KIF17Q9P2E2 1029 aa18.48■□□□□ 0.55
SYNE3-204ENST00000555759 PNPLA7Q6ZV29 1317 aa18.48■□□□□ 0.55
SYNE3-204ENST00000555759 POLR1AO95602 1720 aaPredicted RBP18.48■□□□□ 0.55
SYNE3-204ENST00000555759 COILP38432 576 aaPredicted RBP18.48■□□□□ 0.55
SYNE3-204ENST00000555759 JAK3P52333 1124 aa18.48■□□□□ 0.55
SYNE3-204ENST00000555759 ZNF609O15014 1411 aa18.48■□□□□ 0.55
SYNE3-204ENST00000555759 KAT6BQ8WYB5 2073 aa18.47■□□□□ 0.55
SYNE3-204ENST00000555759 K7ERI5 159 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms