RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 SGPL1O95470 568 aa11.06□□□□□ -0.64
NEK9-205ENST00000555405 CHRNA1P02708 482 aa11.06□□□□□ -0.64
NEK9-205ENST00000555405 SKILP12757 684 aa11.06□□□□□ -0.64
NEK9-205ENST00000555405 TLE2Q04725 743 aa11.06□□□□□ -0.64
NEK9-205ENST00000555405 SRGAP1Q7Z6B7 1085 aa11.06□□□□□ -0.64
NEK9-205ENST00000555405 PDLIM2Q96JY6 352 aa11.06□□□□□ -0.64
NEK9-205ENST00000555405 RNF39Q9H2S5 420 aa11.06□□□□□ -0.64
NEK9-205ENST00000555405 NXF3Q9H4D5 531 aaKnown RBP11.06□□□□□ -0.64
NEK9-205ENST00000555405 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.06□□□□□ -0.64
NEK9-205ENST00000555405 TRPV2Q9Y5S1 764 aa11.06□□□□□ -0.64
NEK9-205ENST00000555405 OFD1O75665 1012 aa11.05□□□□□ -0.64
NEK9-205ENST00000555405 GARTP22102 1010 aa11.05□□□□□ -0.64
NEK9-205ENST00000555405 MSNP26038 577 aaKnown RBP11.05□□□□□ -0.64
NEK9-205ENST00000555405 CYP24A1Q07973 514 aa11.05□□□□□ -0.64
NEK9-205ENST00000555405 SCARA3Q6AZY7 606 aa11.05□□□□□ -0.64
NEK9-205ENST00000555405 SPOPLQ6IQ16 392 aa11.05□□□□□ -0.64
NEK9-205ENST00000555405 SCARA5Q6ZMJ2 495 aa11.05□□□□□ -0.64
NEK9-205ENST00000555405 ZNF410Q86VK4 478 aa11.05□□□□□ -0.64
NEK9-205ENST00000555405 OR5B17Q8NGF7 314 aa11.05□□□□□ -0.64
NEK9-205ENST00000555405 PARD3BQ8TEW8 1205 aa11.05□□□□□ -0.64
NEK9-205ENST00000555405 PDZD7Q9H5P4 517 aa11.05□□□□□ -0.64
NEK9-205ENST00000555405 LAMA2P24043 3122 aaKnown RBP11.05□□□□□ -0.64
NEK9-205ENST00000555405 UMODL1Q5DID0 1318 aa11.05□□□□□ -0.64
NEK9-205ENST00000555405 LRRC10BA6NIK2 292 aa11.05□□□□□ -0.64
NEK9-205ENST00000555405 LRRIQ3A6PVS8 624 aaPredicted RBP11.05□□□□□ -0.64
NEK9-205ENST00000555405 CRYBB1P53674 252 aaPredicted RBP11.05□□□□□ -0.64
NEK9-205ENST00000555405 ADAM17P78536 824 aa11.05□□□□□ -0.64
NEK9-205ENST00000555405 TRPC3Q13507 836 aa11.05□□□□□ -0.64
NEK9-205ENST00000555405 FAM117BQ6P1L5 589 aa11.05□□□□□ -0.64
NEK9-205ENST00000555405 DPH6Q7L8W6 267 aa11.05□□□□□ -0.64
NEK9-205ENST00000555405 SERINC5Q86VE9 423 aa11.05□□□□□ -0.64
NEK9-205ENST00000555405 TAS1R2Q8TE23 839 aa11.05□□□□□ -0.64
NEK9-205ENST00000555405 ACAP3Q96P50 834 aa11.05□□□□□ -0.64
NEK9-205ENST00000555405 CCDC94Q9BW85 323 aaPredicted RBP11.05□□□□□ -0.64
NEK9-205ENST00000555405 MTMR12Q9C0I1 747 aa11.05□□□□□ -0.64
NEK9-205ENST00000555405 TMX1Q9H3N1 280 aa11.05□□□□□ -0.64
NEK9-205ENST00000555405 NXF1Q9UBU9 619 aaKnown RBP11.05□□□□□ -0.64
NEK9-205ENST00000555405 PADI3Q9ULW8 664 aa11.05□□□□□ -0.64
NEK9-205ENST00000555405 UPP2O95045 317 aa11.05□□□□□ -0.64
NEK9-205ENST00000555405 LDHAP00338 332 aaKnown RBP11.05□□□□□ -0.64
NEK9-205ENST00000555405 CYP2C18P33260 490 aa11.05□□□□□ -0.64
NEK9-205ENST00000555405 PIK3CAP42336 1068 aa11.05□□□□□ -0.64
NEK9-205ENST00000555405 KCNMA1Q12791 1236 aa11.05□□□□□ -0.64
NEK9-205ENST00000555405 PAK2Q13177 524 aa11.05□□□□□ -0.64
NEK9-205ENST00000555405 TRIM60Q495X7 471 aa11.05□□□□□ -0.64
NEK9-205ENST00000555405 CDCA2Q69YH5 1023 aaPredicted RBP11.05□□□□□ -0.64
NEK9-205ENST00000555405 NOTUMQ6P988 496 aa11.05□□□□□ -0.64
NEK9-205ENST00000555405 ZPBP2Q6X784 338 aa11.05□□□□□ -0.64
NEK9-205ENST00000555405 SV2AQ7L0J3 742 aa11.05□□□□□ -0.64
NEK9-205ENST00000555405 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.05□□□□□ -0.64
NEK9-205ENST00000555405 FAM228AQ86W67 206 aa11.05□□□□□ -0.64
NEK9-205ENST00000555405 ZNF397Q8NF99 534 aaPredicted RBP11.05□□□□□ -0.64
NEK9-205ENST00000555405 KIF12Q96FN5 646 aa11.05□□□□□ -0.64
NEK9-205ENST00000555405 UBE2TQ9NPD8 197 aaPredicted RBP11.05□□□□□ -0.64
NEK9-205ENST00000555405 CACNG4Q9UBN1 327 aa11.05□□□□□ -0.64
NEK9-205ENST00000555405 LACTBL1A8MY62 500 aa11.04□□□□□ -0.64
NEK9-205ENST00000555405 SLC16A3O15427 465 aaKnown RBP11.04□□□□□ -0.64
NEK9-205ENST00000555405 GYPCP04921 128 aa11.04□□□□□ -0.64
NEK9-205ENST00000555405 YARSP54577 528 aaKnown RBP11.04□□□□□ -0.64
NEK9-205ENST00000555405 USP37Q86T82 979 aa11.04□□□□□ -0.64
NEK9-205ENST00000555405 LINC01465Q8N7H1 131 aa11.04□□□□□ -0.64
NEK9-205ENST00000555405 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.04□□□□□ -0.64
NEK9-205ENST00000555405 TMEM117Q9H0C3 514 aa11.04□□□□□ -0.64
NEK9-205ENST00000555405 CCDC113Q9H0I3 377 aa11.04□□□□□ -0.64
NEK9-205ENST00000555405 CXCL16Q9H2A7 254 aa11.04□□□□□ -0.64
NEK9-205ENST00000555405 ZNHIT6Q9NWK9 470 aaKnown RBP11.04□□□□□ -0.64
NEK9-205ENST00000555405 PUF60Q9UHX1 559 aaKnown RBP11.04□□□□□ -0.64
NEK9-205ENST00000555405 MEIS3P2A8K0S8 358 aa11.04□□□□□ -0.64
NEK9-205ENST00000555405 DCDC2CA8MYV0 355 aa11.04□□□□□ -0.64
NEK9-205ENST00000555405 SSTR3P32745 418 aaPredicted RBP11.04□□□□□ -0.64
NEK9-205ENST00000555405 ZNF394Q53GI3 561 aa11.04□□□□□ -0.64
NEK9-205ENST00000555405 CRELD2Q6UXH1 353 aaPredicted RBP11.04□□□□□ -0.64
NEK9-205ENST00000555405 DHX38Q92620 1227 aaKnown RBP11.04□□□□□ -0.64
NEK9-205ENST00000555405 KAT5Q92993 513 aa11.04□□□□□ -0.64
NEK9-205ENST00000555405 ADAM2Q99965 735 aa11.04□□□□□ -0.64
NEK9-205ENST00000555405 DEF6Q9H4E7 631 aa11.04□□□□□ -0.64
NEK9-205ENST00000555405 PAK6Q9NQU5 681 aaPredicted RBP11.04□□□□□ -0.64
NEK9-205ENST00000555405 PYCARDQ9ULZ3 195 aa11.04□□□□□ -0.64
NEK9-205ENST00000555405 TNFSF13BQ9Y275 285 aa11.04□□□□□ -0.64
NEK9-205ENST00000555405 FHOD1Q9Y613 1164 aa11.04□□□□□ -0.64
NEK9-205ENST00000555405 LRRC37A2A6NM11 1700 aa11.04□□□□□ -0.64
NEK9-205ENST00000555405 DNM1LO00429 736 aa11.03□□□□□ -0.64
NEK9-205ENST00000555405 CKBP12277 381 aa11.03□□□□□ -0.64
NEK9-205ENST00000555405 EN2P19622 333 aaPredicted RBP11.03□□□□□ -0.64
NEK9-205ENST00000555405 CST5P28325 142 aaPredicted RBP11.03□□□□□ -0.64
NEK9-205ENST00000555405 HOXA11P31270 313 aaPredicted RBP11.03□□□□□ -0.64
NEK9-205ENST00000555405 AMHR2Q16671 573 aa11.03□□□□□ -0.64
NEK9-205ENST00000555405 LRRC8AQ8IWT6 810 aa11.03□□□□□ -0.64
NEK9-205ENST00000555405 ZNF333Q96JL9 665 aa11.03□□□□□ -0.64
NEK9-205ENST00000555405 ZFP42Q96MM3 310 aa11.03□□□□□ -0.64
NEK9-205ENST00000555405 DESI2Q9BSY9 194 aa11.03□□□□□ -0.64
NEK9-205ENST00000555405 MKNK1Q9BUB5 465 aa11.03□□□□□ -0.64
NEK9-205ENST00000555405 MCOLN1Q9GZU1 580 aa11.03□□□□□ -0.64
NEK9-205ENST00000555405 TMEM39AQ9NV64 488 aa11.03□□□□□ -0.64
NEK9-205ENST00000555405 CALCAP01258 141 aa11.03□□□□□ -0.64
NEK9-205ENST00000555405 KRT5P13647 590 aa11.03□□□□□ -0.64
NEK9-205ENST00000555405 CD58P19256 250 aa11.03□□□□□ -0.64
NEK9-205ENST00000555405 TSHZ1Q6ZSZ6 1077 aa11.03□□□□□ -0.64
NEK9-205ENST00000555405 SLC9A9Q8IVB4 645 aa11.03□□□□□ -0.64
NEK9-205ENST00000555405 NME8Q8N427 588 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms