RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 POLR2DO15514 142 aaKnown RBP13.25□□□□□ -0.29
SRP54-206ENST00000555317 CLDN3O15551 220 aa13.25□□□□□ -0.29
SRP54-206ENST00000555317 GALTP07902 379 aa13.25□□□□□ -0.29
SRP54-206ENST00000555317 SRGAP2BP0DMP2 458 aa13.25□□□□□ -0.29
SRP54-206ENST00000555317 DNAJB1P25685 340 aa13.25□□□□□ -0.29
SRP54-206ENST00000555317 SLC11A1P49279 550 aa13.25□□□□□ -0.29
SRP54-206ENST00000555317 AFF1P51825 1210 aaKnown RBP13.25□□□□□ -0.29
SRP54-206ENST00000555317 OSTNP61366 133 aa13.25□□□□□ -0.29
SRP54-206ENST00000555317 SMC1AQ14683 1233 aaKnown RBP13.25□□□□□ -0.29
SRP54-206ENST00000555317 HERC4Q5GLZ8 1057 aaPredicted RBP13.25□□□□□ -0.29
SRP54-206ENST00000555317 RESP18Q5W5W9 173 aa13.25□□□□□ -0.29
SRP54-206ENST00000555317 ZPBP2Q6X784 338 aa13.25□□□□□ -0.29
SRP54-206ENST00000555317 SFR1Q86XK3 245 aa13.25□□□□□ -0.29
SRP54-206ENST00000555317 CCDC65Q8IXS2 484 aa13.25□□□□□ -0.29
SRP54-206ENST00000555317 LEO1Q8WVC0 666 aaPredicted RBP13.25□□□□□ -0.29
SRP54-206ENST00000555317 IGSF21Q96ID5 467 aa13.25□□□□□ -0.29
SRP54-206ENST00000555317 CDT1Q9H211 546 aa13.25□□□□□ -0.29
SRP54-206ENST00000555317 IGFLR1Q9H665 355 aa13.25□□□□□ -0.29
SRP54-206ENST00000555317 TLE6Q9H808 572 aa13.25□□□□□ -0.29
SRP54-206ENST00000555317 CLDND1Q9NY35 253 aa13.25□□□□□ -0.29
SRP54-206ENST00000555317 TBX20Q9UMR3 447 aa13.25□□□□□ -0.29
SRP54-206ENST00000555317 SPTBN5Q9NRC6 3674 aaKnown RBP13.24□□□□□ -0.29
SRP54-206ENST00000555317 DDHD2O94830 711 aa13.24□□□□□ -0.29
SRP54-206ENST00000555317 THP07101 528 aa13.24□□□□□ -0.29
SRP54-206ENST00000555317 NMT1P30419 496 aaKnown RBP13.24□□□□□ -0.29
SRP54-206ENST00000555317 IRS1P35568 1242 aa13.24□□□□□ -0.29
SRP54-206ENST00000555317 GRM5P41594 1212 aa13.24□□□□□ -0.29
SRP54-206ENST00000555317 NRIP1P48552 1158 aa13.24□□□□□ -0.29
SRP54-206ENST00000555317 ASIC1P78348 528 aa13.24□□□□□ -0.29
SRP54-206ENST00000555317 TPRNQ4KMQ1 711 aa13.24□□□□□ -0.29
SRP54-206ENST00000555317 STXBP4Q6ZWJ1 553 aa13.24□□□□□ -0.29
SRP54-206ENST00000555317 DDX53Q86TM3 631 aaKnown RBP13.24□□□□□ -0.29
SRP54-206ENST00000555317 RBM23Q86U06 439 aaKnown RBP13.24□□□□□ -0.29
SRP54-206ENST00000555317 COLGALT2Q8IYK4 626 aa13.24□□□□□ -0.29
SRP54-206ENST00000555317 VPS52Q8N1B4 723 aa13.24□□□□□ -0.29
SRP54-206ENST00000555317 ACAP3Q96P50 834 aa13.24□□□□□ -0.29
SRP54-206ENST00000555317 COLEC11Q9BWP8 271 aa13.24□□□□□ -0.29
SRP54-206ENST00000555317 UBE2ZQ9H832 354 aaPredicted RBP13.24□□□□□ -0.29
SRP54-206ENST00000555317 PANK4Q9NVE7 773 aa13.24□□□□□ -0.29
SRP54-206ENST00000555317 KCNH3Q9ULD8 1083 aa13.24□□□□□ -0.29
SRP54-206ENST00000555317 EXOC7Q9UPT5 735 aa13.24□□□□□ -0.29
SRP54-206ENST00000555317 XIRP2A4UGR9 3374 aa13.23□□□□□ -0.29
SRP54-206ENST00000555317 GOLGA6L4A6NEF3 574 aa13.23□□□□□ -0.29
SRP54-206ENST00000555317 NRP1O14786 923 aa13.23□□□□□ -0.29
SRP54-206ENST00000555317 GCNT3O95395 438 aa13.23□□□□□ -0.29
SRP54-206ENST00000555317 KCNA5P22460 613 aa13.23□□□□□ -0.29
SRP54-206ENST00000555317 PROZP22891 400 aa13.23□□□□□ -0.29
SRP54-206ENST00000555317 NDUFV1P49821 464 aa13.23□□□□□ -0.29
SRP54-206ENST00000555317 ERVFC1P60507 584 aa13.23□□□□□ -0.29
SRP54-206ENST00000555317 DSC1Q08554 894 aa13.23□□□□□ -0.29
SRP54-206ENST00000555317 TUSC3Q13454 348 aa13.23□□□□□ -0.29
SRP54-206ENST00000555317 ALCAMQ13740 583 aa13.23□□□□□ -0.29
SRP54-206ENST00000555317 CAMK1Q14012 370 aa13.23□□□□□ -0.29
SRP54-206ENST00000555317 E2F4Q16254 413 aa13.23□□□□□ -0.29
SRP54-206ENST00000555317 KYAT1Q16773 422 aa13.23□□□□□ -0.29
SRP54-206ENST00000555317 STAMQ92783 540 aa13.23□□□□□ -0.29
SRP54-206ENST00000555317 HVCN1Q96D96 273 aa13.23□□□□□ -0.29
SRP54-206ENST00000555317 DNAJC19Q96DA6 116 aa13.23□□□□□ -0.29
SRP54-206ENST00000555317 PABPC5Q96DU9 382 aaKnown RBP13.23□□□□□ -0.29
SRP54-206ENST00000555317 CDCA3Q99618 268 aaPredicted RBP13.23□□□□□ -0.29
SRP54-206ENST00000555317 MSTO1Q9BUK6 570 aa13.23□□□□□ -0.29
SRP54-206ENST00000555317 PTPRHQ9HD43 1115 aa13.23□□□□□ -0.29
SRP54-206ENST00000555317 SLC38A7Q9NVC3 462 aa13.23□□□□□ -0.29
SRP54-206ENST00000555317 TBC1D7Q9P0N9 293 aa13.23□□□□□ -0.29
SRP54-206ENST00000555317 PCDHB13Q9Y5F0 798 aa13.23□□□□□ -0.29
SRP54-206ENST00000555317 PCDHGC5Q9Y5F6 944 aa13.23□□□□□ -0.29
SRP54-206ENST00000555317 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.22□□□□□ -0.29
SRP54-206ENST00000555317 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.22□□□□□ -0.29
SRP54-206ENST00000555317 FSCN2O14926 492 aa13.22□□□□□ -0.29
SRP54-206ENST00000555317 B4GALT3O60512 393 aa13.22□□□□□ -0.29
SRP54-206ENST00000555317 CMA1P23946 247 aa13.22□□□□□ -0.29
SRP54-206ENST00000555317 GTF2BQ00403 316 aa13.22□□□□□ -0.29
SRP54-206ENST00000555317 TFF2Q03403 129 aa13.22□□□□□ -0.29
SRP54-206ENST00000555317 MCL1Q07820 350 aa13.22□□□□□ -0.29
SRP54-206ENST00000555317 HYAL1Q12794 435 aa13.22□□□□□ -0.29
SRP54-206ENST00000555317 TJAP1Q5JTD0 557 aa13.22□□□□□ -0.29
SRP54-206ENST00000555317 ADALQ6DHV7 355 aa13.22□□□□□ -0.29
SRP54-206ENST00000555317 ZNF720Q7Z2F6 126 aa13.22□□□□□ -0.29
SRP54-206ENST00000555317 TMEM173Q86WV6 379 aaPredicted RBP13.22□□□□□ -0.29
SRP54-206ENST00000555317 MAP4K3Q8IVH8 894 aa13.22□□□□□ -0.29
SRP54-206ENST00000555317 SYCP3Q8IZU3 236 aa13.22□□□□□ -0.29
SRP54-206ENST00000555317 CEP120Q8N960 986 aa13.22□□□□□ -0.29
SRP54-206ENST00000555317 KCNN1Q92952 543 aa13.22□□□□□ -0.29
SRP54-206ENST00000555317 ZBTB45Q96K62 511 aaPredicted RBP13.22□□□□□ -0.29
SRP54-206ENST00000555317 ASB2Q96Q27 587 aa13.22□□□□□ -0.29
SRP54-206ENST00000555317 ACCSQ96QU6 501 aa13.22□□□□□ -0.29
SRP54-206ENST00000555317 TRIM9Q9C026 710 aa13.22□□□□□ -0.29
SRP54-206ENST00000555317 ST6GALNAC4Q9H4F1 302 aa13.22□□□□□ -0.29
SRP54-206ENST00000555317 OLFML3Q9NRN5 406 aa13.22□□□□□ -0.29
SRP54-206ENST00000555317 KBTBD4Q9NVX7 518 aa13.22□□□□□ -0.29
SRP54-206ENST00000555317 MIOSQ9NXC5 875 aa13.22□□□□□ -0.29
SRP54-206ENST00000555317 A0A1B0GVL5 298 aa13.21□□□□□ -0.29
SRP54-206ENST00000555317 CASTOR2A6NHX0 329 aa13.21□□□□□ -0.29
SRP54-206ENST00000555317 PTGESO14684 152 aa13.21□□□□□ -0.29
SRP54-206ENST00000555317 TADA2AO75478 443 aa13.21□□□□□ -0.29
SRP54-206ENST00000555317 CXCL14O95715 111 aa13.21□□□□□ -0.29
SRP54-206ENST00000555317 PIGRP01833 764 aa13.21□□□□□ -0.29
SRP54-206ENST00000555317 URODP06132 367 aa13.21□□□□□ -0.29
SRP54-206ENST00000555317 CLTAP09496 248 aa13.21□□□□□ -0.29
SRP54-206ENST00000555317 PFKFB1P16118 471 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms