RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 SLC30A5Q8TAD4 765 aa10.66□□□□□ -0.7
TMEM116-216ENST00000552800 DEPTORQ8TB45 409 aa10.66□□□□□ -0.7
TMEM116-216ENST00000552800 DHX38Q92620 1227 aaKnown RBP10.66□□□□□ -0.7
TMEM116-216ENST00000552800 TMEM143Q96AN5 459 aa10.66□□□□□ -0.7
TMEM116-216ENST00000552800 LRCH3Q96II8 777 aa10.66□□□□□ -0.7
TMEM116-216ENST00000552800 CALR3Q96L12 384 aaKnown RBP10.66□□□□□ -0.7
TMEM116-216ENST00000552800 C16orf45Q96MC5 204 aaPredicted RBP10.66□□□□□ -0.7
TMEM116-216ENST00000552800 ACO2Q99798 780 aaKnown RBP10.66□□□□□ -0.7
TMEM116-216ENST00000552800 LSM14BQ9BX40 385 aaKnown RBP10.66□□□□□ -0.7
TMEM116-216ENST00000552800 TSGA10Q9BZW7 698 aa10.66□□□□□ -0.7
TMEM116-216ENST00000552800 GPR88Q9GZN0 384 aa10.66□□□□□ -0.7
TMEM116-216ENST00000552800 TMEM117Q9H0C3 514 aa10.66□□□□□ -0.7
TMEM116-216ENST00000552800 TUT1Q9H6E5 874 aaKnown RBP10.66□□□□□ -0.7
TMEM116-216ENST00000552800 TNFSF13BQ9Y275 285 aa10.66□□□□□ -0.7
TMEM116-216ENST00000552800 KAT6AQ92794 2004 aa10.66□□□□□ -0.7
TMEM116-216ENST00000552800 ZSWIM8A7E2V4 1837 aa10.65□□□□□ -0.7
TMEM116-216ENST00000552800 NRCAMQ92823 1304 aa10.65□□□□□ -0.7
TMEM116-216ENST00000552800 CNTNAP2Q9UHC6 1331 aa10.65□□□□□ -0.7
TMEM116-216ENST00000552800 FANCGO15287 622 aa10.65□□□□□ -0.7
TMEM116-216ENST00000552800 KRT86O43790 486 aa10.65□□□□□ -0.7
TMEM116-216ENST00000552800 CYP2J2P51589 502 aa10.65□□□□□ -0.7
TMEM116-216ENST00000552800 SOX10P56693 466 aa10.65□□□□□ -0.7
TMEM116-216ENST00000552800 DLG4P78352 724 aa10.65□□□□□ -0.7
TMEM116-216ENST00000552800 GCNT1Q02742 428 aa10.65□□□□□ -0.7
TMEM116-216ENST00000552800 TNFAIP2Q03169 654 aa10.65□□□□□ -0.7
TMEM116-216ENST00000552800 NOGQ13253 232 aa10.65□□□□□ -0.7
TMEM116-216ENST00000552800 BMS1Q14692 1282 aaKnown RBP10.65□□□□□ -0.7
TMEM116-216ENST00000552800 KIF22Q14807 665 aa10.65□□□□□ -0.7
TMEM116-216ENST00000552800 KYAT1Q16773 422 aa10.65□□□□□ -0.7
TMEM116-216ENST00000552800 ZACNQ401N2 412 aa10.65□□□□□ -0.7
TMEM116-216ENST00000552800 MARCH8Q5T0T0 291 aa10.65□□□□□ -0.7
TMEM116-216ENST00000552800 WDR78Q5VTH9 848 aa10.65□□□□□ -0.7
TMEM116-216ENST00000552800 ZNF410Q86VK4 478 aa10.65□□□□□ -0.7
TMEM116-216ENST00000552800 CBWD2Q8IUF1 395 aa10.65□□□□□ -0.7
TMEM116-216ENST00000552800 OLIG1Q8TAK6 271 aa10.65□□□□□ -0.7
TMEM116-216ENST00000552800 AFG1LQ8WV93 481 aa10.65□□□□□ -0.7
TMEM116-216ENST00000552800 POMGNT1Q8WZA1 660 aa10.65□□□□□ -0.7
TMEM116-216ENST00000552800 PCMTD1Q96MG8 357 aaPredicted RBP10.65□□□□□ -0.7
TMEM116-216ENST00000552800 APBA2Q99767 749 aa10.65□□□□□ -0.7
TMEM116-216ENST00000552800 MRPL4Q9BYD3 311 aaKnown RBP10.65□□□□□ -0.7
TMEM116-216ENST00000552800 HAPLN2Q9GZV7 340 aa10.65□□□□□ -0.7
TMEM116-216ENST00000552800 FAM124BQ9H5Z6 455 aaPredicted RBP10.65□□□□□ -0.7
TMEM116-216ENST00000552800 IFT122Q9HBG6 1241 aa10.65□□□□□ -0.7
TMEM116-216ENST00000552800 GCNT4Q9P109 453 aa10.65□□□□□ -0.7
TMEM116-216ENST00000552800 SUCLA2Q9P2R7 463 aaPredicted RBP10.65□□□□□ -0.7
TMEM116-216ENST00000552800 CPA4Q9UI42 421 aa10.65□□□□□ -0.7
TMEM116-216ENST00000552800 AGO2Q9UKV8 859 aaKnown RBP10.65□□□□□ -0.7
TMEM116-216ENST00000552800 ZNF215Q9UL58 517 aaPredicted RBP10.65□□□□□ -0.7
TMEM116-216ENST00000552800 CNTN6Q9UQ52 1028 aa10.65□□□□□ -0.7
TMEM116-216ENST00000552800 CASP8AP2Q9UKL3 1982 aa10.65□□□□□ -0.71
TMEM116-216ENST00000552800 A0A0A6YYK5 440 aaPredicted RBP10.64□□□□□ -0.71
TMEM116-216ENST00000552800 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.64□□□□□ -0.71
TMEM116-216ENST00000552800 SMIM35A0A1B0GVV1 85 aa10.64□□□□□ -0.71
TMEM116-216ENST00000552800 LRRIQ3A6PVS8 624 aaPredicted RBP10.64□□□□□ -0.71
TMEM116-216ENST00000552800 TISP43B9A030 160 aa10.64□□□□□ -0.71
TMEM116-216ENST00000552800 HNRNPDLO14979 420 aaKnown RBP10.64□□□□□ -0.71
TMEM116-216ENST00000552800 KLRC1P26715 233 aa10.64□□□□□ -0.71
TMEM116-216ENST00000552800 TMOD1P28289 359 aa10.64□□□□□ -0.71
TMEM116-216ENST00000552800 SOX5P35711 763 aa10.64□□□□□ -0.71
TMEM116-216ENST00000552800 EIF4A3P38919 411 aaKnown RBP10.64□□□□□ -0.71
TMEM116-216ENST00000552800 STAT1P42224 750 aa10.64□□□□□ -0.71
TMEM116-216ENST00000552800 LIG4P49917 911 aa10.64□□□□□ -0.71
TMEM116-216ENST00000552800 KIF11P52732 1056 aa10.64□□□□□ -0.71
TMEM116-216ENST00000552800 SP4Q02446 784 aa10.64□□□□□ -0.71
TMEM116-216ENST00000552800 DRP2Q13474 957 aa10.64□□□□□ -0.71
TMEM116-216ENST00000552800 PRPF4BQ13523 1007 aaKnown RBP10.64□□□□□ -0.71
TMEM116-216ENST00000552800 MAPK6Q16659 721 aa10.64□□□□□ -0.71
TMEM116-216ENST00000552800 DNTTIP2Q5QJE6 756 aaKnown RBP10.64□□□□□ -0.71
TMEM116-216ENST00000552800 PAPD7Q5XG87 772 aaKnown RBP10.64□□□□□ -0.71
TMEM116-216ENST00000552800 IQCEQ6IPM2 695 aa10.64□□□□□ -0.71
TMEM116-216ENST00000552800 EFCAB12Q6NXP0 572 aa10.64□□□□□ -0.71
TMEM116-216ENST00000552800 MTHFD1LQ6UB35 978 aa10.64□□□□□ -0.71
TMEM116-216ENST00000552800 THSD4Q6ZMP0 1018 aa10.64□□□□□ -0.71
TMEM116-216ENST00000552800 SRGAP1Q7Z6B7 1085 aa10.64□□□□□ -0.71
TMEM116-216ENST00000552800 RPAINQ86UA6 219 aa10.64□□□□□ -0.71
TMEM116-216ENST00000552800 FAM71AQ8IYT1 594 aa10.64□□□□□ -0.71
TMEM116-216ENST00000552800 ZNF516Q92618 1163 aa10.64□□□□□ -0.71
TMEM116-216ENST00000552800 CRACR2AQ9BSW2 395 aa10.64□□□□□ -0.71
TMEM116-216ENST00000552800 KIFC3Q9BVG8 833 aa10.64□□□□□ -0.71
TMEM116-216ENST00000552800 UPF3AQ9H1J1 476 aaKnown RBP10.64□□□□□ -0.71
TMEM116-216ENST00000552800 PCIF1Q9H4Z3 704 aa10.64□□□□□ -0.71
TMEM116-216ENST00000552800 GPBP1L1Q9HC44 474 aaPredicted RBP10.64□□□□□ -0.71
TMEM116-216ENST00000552800 LUC7LQ9NQ29 371 aaKnown RBP10.64□□□□□ -0.71
TMEM116-216ENST00000552800 PRMT7Q9NVM4 692 aaPredicted RBP10.64□□□□□ -0.71
TMEM116-216ENST00000552800 FLRT1Q9NZU1 646 aa10.64□□□□□ -0.71
TMEM116-216ENST00000552800 CPSF3Q9UKF6 684 aaKnown RBP10.64□□□□□ -0.71
TMEM116-216ENST00000552800 PCDHA13Q9Y5I0 950 aa10.64□□□□□ -0.71
TMEM116-216ENST00000552800 FHOD1Q9Y613 1164 aa10.64□□□□□ -0.71
TMEM116-216ENST00000552800 ANO9A1A5B4 782 aa10.63□□□□□ -0.71
TMEM116-216ENST00000552800 F8VZ95 297 aa10.63□□□□□ -0.71
TMEM116-216ENST00000552800 DYNC1I1O14576 645 aa10.63□□□□□ -0.71
TMEM116-216ENST00000552800 OGTO15294 1046 aa10.63□□□□□ -0.71
TMEM116-216ENST00000552800 ADCY6O43306 1168 aa10.63□□□□□ -0.71
TMEM116-216ENST00000552800 KIF5CO60282 957 aa10.63□□□□□ -0.71
TMEM116-216ENST00000552800 B4GALT4O60513 344 aa10.63□□□□□ -0.71
TMEM116-216ENST00000552800 DUSP11O75319 330 aaKnown RBP10.63□□□□□ -0.71
TMEM116-216ENST00000552800 IPO7O95373 1038 aaKnown RBP10.63□□□□□ -0.71
TMEM116-216ENST00000552800 GZMAP12544 262 aa10.63□□□□□ -0.71
TMEM116-216ENST00000552800 ACTN1P12814 892 aa10.63□□□□□ -0.71
TMEM116-216ENST00000552800 MXI1P50539 228 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms