RNA–Protein interactions for RNA: ENST00000550070.6

ERBB3-214, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-214ENST00000550070 CCDC134Q9H6E4 229 aa11.05□□□□□ -0.64
ERBB3-214ENST00000550070 CHCHD3Q9NX63 227 aaKnown RBP11.05□□□□□ -0.64
ERBB3-214ENST00000550070 ODF2LQ9ULJ1 636 aa11.05□□□□□ -0.64
ERBB3-214ENST00000550070 PRR12Q9ULL5 1215 aa11.05□□□□□ -0.64
ERBB3-214ENST00000550070 UBR3Q6ZT12 1888 aa11.05□□□□□ -0.64
ERBB3-214ENST00000550070 A0A1W2PRG0 241 aa11.04□□□□□ -0.64
ERBB3-214ENST00000550070 POLRMTO00411 1230 aaKnown RBP11.04□□□□□ -0.64
ERBB3-214ENST00000550070 RASGRF2O14827 1237 aa11.04□□□□□ -0.64
ERBB3-214ENST00000550070 HIP1RO75146 1068 aa11.04□□□□□ -0.64
ERBB3-214ENST00000550070 RTN2O75298 545 aa11.04□□□□□ -0.64
ERBB3-214ENST00000550070 VIMP08670 466 aaKnown RBP11.04□□□□□ -0.64
ERBB3-214ENST00000550070 RARGP13631 454 aa11.04□□□□□ -0.64
ERBB3-214ENST00000550070 PPP1R7Q15435 360 aa11.04□□□□□ -0.64
ERBB3-214ENST00000550070 SIX1Q15475 284 aaPredicted RBP11.04□□□□□ -0.64
ERBB3-214ENST00000550070 CNGA2Q16280 664 aa11.04□□□□□ -0.64
ERBB3-214ENST00000550070 SEL1L2Q5TEA6 688 aa11.04□□□□□ -0.64
ERBB3-214ENST00000550070 MSL1Q68DK7 614 aa11.04□□□□□ -0.64
ERBB3-214ENST00000550070 BTNL9Q6UXG8 535 aa11.04□□□□□ -0.64
ERBB3-214ENST00000550070 KIAA0825Q8IV33 1275 aa11.04□□□□□ -0.64
ERBB3-214ENST00000550070 SLC9A9Q8IVB4 645 aa11.04□□□□□ -0.64
ERBB3-214ENST00000550070 CCDC105Q8IYK2 499 aa11.04□□□□□ -0.64
ERBB3-214ENST00000550070 ZSWIM2Q8NEG5 633 aa11.04□□□□□ -0.64
ERBB3-214ENST00000550070 RSPH1Q8WYR4 309 aa11.04□□□□□ -0.64
ERBB3-214ENST00000550070 NACC1Q96RE7 527 aa11.04□□□□□ -0.64
ERBB3-214ENST00000550070 UNC45AQ9H3U1 944 aa11.04□□□□□ -0.64
ERBB3-214ENST00000550070 ACP6Q9NPH0 428 aa11.04□□□□□ -0.64
ERBB3-214ENST00000550070 PARP2Q9UGN5 583 aa11.04□□□□□ -0.64
ERBB3-214ENST00000550070 PFASO15067 1338 aa11.04□□□□□ -0.64
ERBB3-214ENST00000550070 GAS7O60861 476 aa11.04□□□□□ -0.64
ERBB3-214ENST00000550070 ECEL1O95672 775 aa11.04□□□□□ -0.64
ERBB3-214ENST00000550070 APBA3O96018 575 aa11.04□□□□□ -0.64
ERBB3-214ENST00000550070 RARAP10276 462 aa11.04□□□□□ -0.64
ERBB3-214ENST00000550070 RFX1P22670 979 aa11.04□□□□□ -0.64
ERBB3-214ENST00000550070 GCLMP48507 274 aa11.04□□□□□ -0.64
ERBB3-214ENST00000550070 MKRN4PQ13434 485 aaPredicted RBP11.04□□□□□ -0.64
ERBB3-214ENST00000550070 CYP1B1Q16678 543 aa11.04□□□□□ -0.64
ERBB3-214ENST00000550070 C1orf220Q5T0J3 134 aa11.04□□□□□ -0.64
ERBB3-214ENST00000550070 MAEAQ7L5Y9 396 aa11.04□□□□□ -0.64
ERBB3-214ENST00000550070 EXOC3L1Q86VI1 746 aa11.04□□□□□ -0.64
ERBB3-214ENST00000550070 CCDC113Q9H0I3 377 aa11.04□□□□□ -0.64
ERBB3-214ENST00000550070 WNT8AQ9H1J5 351 aa11.04□□□□□ -0.64
ERBB3-214ENST00000550070 SAMD15Q9P1V8 674 aa11.04□□□□□ -0.64
ERBB3-214ENST00000550070 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.04□□□□□ -0.64
ERBB3-214ENST00000550070 ATP6V1G2O95670 118 aa11.03□□□□□ -0.64
ERBB3-214ENST00000550070 GGPS1O95749 300 aa11.03□□□□□ -0.64
ERBB3-214ENST00000550070 ARP10275 920 aa11.03□□□□□ -0.64
ERBB3-214ENST00000550070 GBP1P32455 592 aa11.03□□□□□ -0.64
ERBB3-214ENST00000550070 VAMP7P51809 220 aa11.03□□□□□ -0.64
ERBB3-214ENST00000550070 EN1Q05925 392 aaPredicted RBP11.03□□□□□ -0.64
ERBB3-214ENST00000550070 RRP1BQ14684 758 aaKnown RBP11.03□□□□□ -0.64
ERBB3-214ENST00000550070 SLMAPQ14BN4 828 aa11.03□□□□□ -0.64
ERBB3-214ENST00000550070 EPC2Q52LR7 807 aa11.03□□□□□ -0.64
ERBB3-214ENST00000550070 FAM133BQ5BKY9 247 aaKnown RBP11.03□□□□□ -0.64
ERBB3-214ENST00000550070 TRPM8Q7Z2W7 1104 aa11.03□□□□□ -0.64
ERBB3-214ENST00000550070 NOP9Q86U38 636 aaKnown RBP11.03□□□□□ -0.64
ERBB3-214ENST00000550070 CCDC25Q86WR0 208 aa11.03□□□□□ -0.64
ERBB3-214ENST00000550070 SLC13A5Q86YT5 568 aaPredicted RBP11.03□□□□□ -0.64
ERBB3-214ENST00000550070 GIMAP7Q8NHV1 300 aa11.03□□□□□ -0.64
ERBB3-214ENST00000550070 ABCF3Q9NUQ8 709 aa11.03□□□□□ -0.64
ERBB3-214ENST00000550070 G3V3G9 751 aa11.03□□□□□ -0.64
ERBB3-214ENST00000550070 TP73O15350 636 aa11.03□□□□□ -0.64
ERBB3-214ENST00000550070 C21orf2O43822 256 aa11.03□□□□□ -0.64
ERBB3-214ENST00000550070 GH2P01242 217 aa11.03□□□□□ -0.64
ERBB3-214ENST00000550070 GSTA1P08263 222 aa11.03□□□□□ -0.64
ERBB3-214ENST00000550070 CREB1P16220 341 aa11.03□□□□□ -0.64
ERBB3-214ENST00000550070 LLGL1Q15334 1064 aa11.03□□□□□ -0.64
ERBB3-214ENST00000550070 LONRF1Q17RB8 773 aa11.03□□□□□ -0.64
ERBB3-214ENST00000550070 ZNF568Q3ZCX4 644 aa11.03□□□□□ -0.64
ERBB3-214ENST00000550070 DCAF8Q5TAQ9 597 aa11.03□□□□□ -0.64
ERBB3-214ENST00000550070 CROCCP2Q86T23 111 aa11.03□□□□□ -0.64
ERBB3-214ENST00000550070 CCDC63Q8NA47 563 aa11.03□□□□□ -0.64
ERBB3-214ENST00000550070 PLEKHO2Q8TD55 490 aa11.03□□□□□ -0.64
ERBB3-214ENST00000550070 EPS8L1Q8TE68 723 aa11.03□□□□□ -0.64
ERBB3-214ENST00000550070 LXNQ9BS40 222 aa11.03□□□□□ -0.64
ERBB3-214ENST00000550070 TACO1Q9BSH4 297 aaKnown RBP11.03□□□□□ -0.64
ERBB3-214ENST00000550070 DDX23Q9BUQ8 820 aaKnown RBP11.03□□□□□ -0.64
ERBB3-214ENST00000550070 IDI2Q9BXS1 227 aa11.03□□□□□ -0.64
ERBB3-214ENST00000550070 DBNDD1Q9H9R9 158 aa11.03□□□□□ -0.64
ERBB3-214ENST00000550070 NOD2Q9HC29 1040 aa11.03□□□□□ -0.64
ERBB3-214ENST00000550070 NOCTQ9UK39 431 aaKnown RBP11.03□□□□□ -0.64
ERBB3-214ENST00000550070 AGAP1Q9UPQ3 857 aa11.03□□□□□ -0.64
ERBB3-214ENST00000550070 K7ENM7 598 aa11.02□□□□□ -0.64
ERBB3-214ENST00000550070 MTA2O94776 668 aa11.02□□□□□ -0.64
ERBB3-214ENST00000550070 LRRC14Q15048 493 aa11.02□□□□□ -0.64
ERBB3-214ENST00000550070 INTS8Q75QN2 995 aaKnown RBP11.02□□□□□ -0.64
ERBB3-214ENST00000550070 CYFIP1Q7L576 1253 aa11.02□□□□□ -0.64
ERBB3-214ENST00000550070 AGBL1Q96MI9 1066 aa11.02□□□□□ -0.64
ERBB3-214ENST00000550070 CBWD1Q9BRT8 395 aa11.02□□□□□ -0.64
ERBB3-214ENST00000550070 ZNF577Q9BSK1 485 aa11.02□□□□□ -0.64
ERBB3-214ENST00000550070 AAASQ9NRG9 546 aa11.02□□□□□ -0.64
ERBB3-214ENST00000550070 KCND2Q9NZV8 630 aa11.02□□□□□ -0.64
ERBB3-214ENST00000550070 BAIAP2L1Q9UHR4 511 aa11.02□□□□□ -0.64
ERBB3-214ENST00000550070 GGT7Q9UJ14 662 aa11.02□□□□□ -0.64
ERBB3-214ENST00000550070 NRXN2Q9P2S2 1712 aa11.02□□□□□ -0.65
ERBB3-214ENST00000550070 SNX3O60493 162 aa11.02□□□□□ -0.65
ERBB3-214ENST00000550070 ELF1P32519 619 aa11.02□□□□□ -0.65
ERBB3-214ENST00000550070 MFSD5Q6N075 450 aa11.02□□□□□ -0.65
ERBB3-214ENST00000550070 RNF207Q6ZRF8 634 aa11.02□□□□□ -0.65
ERBB3-214ENST00000550070 OTUD6AQ7L8S5 288 aa11.02□□□□□ -0.65
ERBB3-214ENST00000550070 TBC1D1Q86TI0 1168 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms