RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 KCNC3Q14003 757 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 TTLL4Q14679 1199 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 MAN2A1Q16706 1144 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 KNOP1Q1ED39 458 aaKnown RBP5.36□□□□□ -1.55
SCAF11-212ENST00000549162 FAM47AQ5JRC9 791 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 TTBK2Q6IQ55 1244 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 SLC39A4Q6P5W5 647 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 TXLNBQ8N3L3 684 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 IRGQQ8WZA9 623 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 MMP19Q99542 508 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 CGRRF1Q99675 332 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 FAM83CQ9BQN1 747 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 SEMA6BQ9H3T3 888 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 TSPY26PQ9H489 355 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 AGPAT5Q9NUQ2 364 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 CNPY2Q9Y2B0 182 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 PTPN22Q9Y2R2 807 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 IPO5O00410 1097 aaKnown RBP5.35□□□□□ -1.55
SCAF11-212ENST00000549162 CALUO43852 315 aaPredicted RBP5.35□□□□□ -1.55
SCAF11-212ENST00000549162 RAD17O75943 681 aa5.35□□□□□ -1.55
SCAF11-212ENST00000549162 GLI1P08151 1106 aa5.35□□□□□ -1.55
SCAF11-212ENST00000549162 AKR1A1P14550 325 aa5.35□□□□□ -1.55
SCAF11-212ENST00000549162 ZNF268Q14587 947 aaPredicted RBP5.35□□□□□ -1.55
SCAF11-212ENST00000549162 TCP11X2Q5H9J9 407 aa5.35□□□□□ -1.55
SCAF11-212ENST00000549162 UBXN11Q5T124 520 aa5.35□□□□□ -1.55
SCAF11-212ENST00000549162 IER5LQ5T953 404 aa5.35□□□□□ -1.55
SCAF11-212ENST00000549162 JAKMIP3Q5VZ66 844 aa5.35□□□□□ -1.55
SCAF11-212ENST00000549162 FERMT3Q86UX7 667 aa5.35□□□□□ -1.55
SCAF11-212ENST00000549162 CCDC65Q8IXS2 484 aa5.35□□□□□ -1.55
SCAF11-212ENST00000549162 DDX1Q92499 740 aaKnown RBP5.35□□□□□ -1.55
SCAF11-212ENST00000549162 CENPIQ92674 756 aaPredicted RBP5.35□□□□□ -1.55
SCAF11-212ENST00000549162 ATG4CQ96DT6 458 aa5.35□□□□□ -1.55
SCAF11-212ENST00000549162 HERC2P3Q9BVR0 1158 aa5.35□□□□□ -1.55
SCAF11-212ENST00000549162 IFT122Q9HBG6 1241 aa5.35□□□□□ -1.55
SCAF11-212ENST00000549162 WRAP73Q9P2S5 460 aaPredicted RBP5.35□□□□□ -1.55
SCAF11-212ENST00000549162 NAP1L2Q9ULW6 460 aaPredicted RBP5.35□□□□□ -1.55
SCAF11-212ENST00000549162 DOLKQ9UPQ8 538 aa5.35□□□□□ -1.55
SCAF11-212ENST00000549162 ZHX2Q9Y6X8 837 aa5.35□□□□□ -1.55
SCAF11-212ENST00000549162 NOTCH4Q99466 2003 aa5.35□□□□□ -1.55
SCAF11-212ENST00000549162 PIRO00625 290 aa5.35□□□□□ -1.55
SCAF11-212ENST00000549162 ZNF862O60290 1169 aa5.35□□□□□ -1.55
SCAF11-212ENST00000549162 CACNG3O60359 315 aa5.35□□□□□ -1.55
SCAF11-212ENST00000549162 NR1I2O75469 434 aa5.35□□□□□ -1.55
SCAF11-212ENST00000549162 NOL4O94818 638 aa5.35□□□□□ -1.55
SCAF11-212ENST00000549162 ACO1P21399 889 aaKnown RBP5.35□□□□□ -1.55
SCAF11-212ENST00000549162 ZNF75DP51815 510 aa5.35□□□□□ -1.55
SCAF11-212ENST00000549162 SWT1Q5T5J6 900 aaKnown RBP5.35□□□□□ -1.55
SCAF11-212ENST00000549162 CAVIN1Q6NZI2 390 aaKnown RBP5.35□□□□□ -1.55
SCAF11-212ENST00000549162 KLHDC10Q6PID8 442 aa5.35□□□□□ -1.55
SCAF11-212ENST00000549162 INTS8Q75QN2 995 aaKnown RBP5.35□□□□□ -1.55
SCAF11-212ENST00000549162 SV2BQ7L1I2 683 aa5.35□□□□□ -1.55
SCAF11-212ENST00000549162 TADA1Q96BN2 335 aa5.35□□□□□ -1.55
SCAF11-212ENST00000549162 RTP4Q96DX8 246 aa5.35□□□□□ -1.55
SCAF11-212ENST00000549162 GPR101Q96P66 508 aaPredicted RBP5.35□□□□□ -1.55
SCAF11-212ENST00000549162 FAM129BQ96TA1 746 aa5.35□□□□□ -1.55
SCAF11-212ENST00000549162 UPF3BQ9BZI7 483 aaKnown RBP5.35□□□□□ -1.55
SCAF11-212ENST00000549162 SAP130Q9H0E3 1048 aa5.35□□□□□ -1.55
SCAF11-212ENST00000549162 RXFP1Q9HBX9 757 aa5.35□□□□□ -1.55
SCAF11-212ENST00000549162 FETUBQ9UGM5 382 aa5.35□□□□□ -1.55
SCAF11-212ENST00000549162 ITGA11Q9UKX5 1188 aa5.35□□□□□ -1.55
SCAF11-212ENST00000549162 TUBBP07437 444 aa5.35□□□□□ -1.55
SCAF11-212ENST00000549162 PDGFRBP09619 1106 aa5.35□□□□□ -1.55
SCAF11-212ENST00000549162 DNAJB1P25685 340 aa5.35□□□□□ -1.55
SCAF11-212ENST00000549162 ARSEP51690 589 aa5.35□□□□□ -1.55
SCAF11-212ENST00000549162 NLRP5P59047 1200 aa5.35□□□□□ -1.55
SCAF11-212ENST00000549162 TAP1Q03518 808 aa5.35□□□□□ -1.55
SCAF11-212ENST00000549162 VWA3BQ502W6 1294 aa5.35□□□□□ -1.55
SCAF11-212ENST00000549162 HGSNATQ68CP4 663 aa5.35□□□□□ -1.55
SCAF11-212ENST00000549162 MTHFD1LQ6UB35 978 aa5.35□□□□□ -1.55
SCAF11-212ENST00000549162 CD300LGQ6UXG3 332 aa5.35□□□□□ -1.55
SCAF11-212ENST00000549162 GALNT7Q86SF2 657 aa5.35□□□□□ -1.55
SCAF11-212ENST00000549162 CCDC84Q86UT8 332 aaPredicted RBP5.35□□□□□ -1.55
SCAF11-212ENST00000549162 ZSCAN30Q86W11 494 aa5.35□□□□□ -1.55
SCAF11-212ENST00000549162 PHF13Q86YI8 300 aaPredicted RBP5.35□□□□□ -1.55
SCAF11-212ENST00000549162 FAM71AQ8IYT1 594 aa5.35□□□□□ -1.55
SCAF11-212ENST00000549162 CALML4Q96GE6 196 aa5.35□□□□□ -1.55
SCAF11-212ENST00000549162 SPATA17Q96L03 361 aa5.35□□□□□ -1.55
SCAF11-212ENST00000549162 PPP1R10Q96QC0 940 aaKnown RBP5.35□□□□□ -1.55
SCAF11-212ENST00000549162 ACO2Q99798 780 aaKnown RBP5.35□□□□□ -1.55
SCAF11-212ENST00000549162 ATP6V0A4Q9HBG4 840 aa5.35□□□□□ -1.55
SCAF11-212ENST00000549162 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.35□□□□□ -1.55
SCAF11-212ENST00000549162 ERAP1Q9NZ08 941 aa5.35□□□□□ -1.55
SCAF11-212ENST00000549162 RCOR3Q9P2K3 495 aaPredicted RBP5.35□□□□□ -1.55
SCAF11-212ENST00000549162 CCPG1Q9ULG6 757 aa5.35□□□□□ -1.55
SCAF11-212ENST00000549162 GIT1Q9Y2X7 761 aa5.35□□□□□ -1.55
SCAF11-212ENST00000549162 PCDHGC5Q9Y5F6 944 aa5.35□□□□□ -1.55
SCAF11-212ENST00000549162 EML1O00423 815 aa5.34□□□□□ -1.55
SCAF11-212ENST00000549162 CTIFO43310 598 aaKnown RBP5.34□□□□□ -1.55
SCAF11-212ENST00000549162 NUDT7P0C024 238 aa5.34□□□□□ -1.55
SCAF11-212ENST00000549162 PLA2G4BP0C869 781 aa5.34□□□□□ -1.55
SCAF11-212ENST00000549162 MZF1P28698 734 aaPredicted RBP5.34□□□□□ -1.55
SCAF11-212ENST00000549162 GNA15P30679 374 aa5.34□□□□□ -1.55
SCAF11-212ENST00000549162 CSRP3P50461 194 aa5.34□□□□□ -1.55
SCAF11-212ENST00000549162 FGD1P98174 961 aa5.34□□□□□ -1.55
SCAF11-212ENST00000549162 SP2Q02086 613 aa5.34□□□□□ -1.55
SCAF11-212ENST00000549162 MTMR1Q13613 665 aa5.34□□□□□ -1.55
SCAF11-212ENST00000549162 PLEKHG4Q58EX7 1191 aa5.34□□□□□ -1.55
SCAF11-212ENST00000549162 SAMD7Q7Z3H4 446 aa5.34□□□□□ -1.55
SCAF11-212ENST00000549162 CRYBG2Q8N1P7 616 aa5.34□□□□□ -1.55
SCAF11-212ENST00000549162 TOP6BLQ8N6T0 577 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms