RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 PCDHB2Q9Y5E7 798 aa18.99■□□□□ 0.63
HDAC7-227ENST00000548080 KIAA1671Q9BY89 1806 aa18.99■□□□□ 0.63
HDAC7-227ENST00000548080 CDH23Q9H251 3354 aa18.98■□□□□ 0.63
HDAC7-227ENST00000548080 A0A0U1RQF3 1178 aa18.98■□□□□ 0.63
HDAC7-227ENST00000548080 TBKBP1A7MCY6 615 aa18.98■□□□□ 0.63
HDAC7-227ENST00000548080 CDC25BP30305 580 aa18.98■□□□□ 0.63
HDAC7-227ENST00000548080 HOXD13P35453 343 aa18.98■□□□□ 0.63
HDAC7-227ENST00000548080 EFNA5P52803 228 aa18.98■□□□□ 0.63
HDAC7-227ENST00000548080 ZCWPW2Q504Y3 356 aa18.98■□□□□ 0.63
HDAC7-227ENST00000548080 CLLU1OSQ5K130 101 aa18.98■□□□□ 0.63
HDAC7-227ENST00000548080 NOTUMQ6P988 496 aa18.98■□□□□ 0.63
HDAC7-227ENST00000548080 PPP4R3CPQ6ZMV5 832 aa18.98■□□□□ 0.63
HDAC7-227ENST00000548080 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.98■□□□□ 0.63
HDAC7-227ENST00000548080 ZNF598Q86UK7 904 aaKnown RBP18.98■□□□□ 0.63
HDAC7-227ENST00000548080 HELQQ8TDG4 1101 aa18.98■□□□□ 0.63
HDAC7-227ENST00000548080 SPIRE2Q8WWL2 714 aa18.98■□□□□ 0.63
HDAC7-227ENST00000548080 ZNF689Q96CS4 500 aaPredicted RBP18.98■□□□□ 0.63
HDAC7-227ENST00000548080 STRA6Q9BX79 667 aa18.98■□□□□ 0.63
HDAC7-227ENST00000548080 XPO4Q9C0E2 1151 aaKnown RBP18.98■□□□□ 0.63
HDAC7-227ENST00000548080 ST6GALNAC4Q9H4F1 302 aa18.98■□□□□ 0.63
HDAC7-227ENST00000548080 PDZD7Q9H5P4 517 aa18.98■□□□□ 0.63
HDAC7-227ENST00000548080 PHLPP2Q6ZVD8 1323 aa18.98■□□□□ 0.63
HDAC7-227ENST00000548080 CNTNAP2Q9UHC6 1331 aa18.98■□□□□ 0.63
HDAC7-227ENST00000548080 NLRC5Q86WI3 1866 aa18.98■□□□□ 0.63
HDAC7-227ENST00000548080 ACKR2O00590 384 aa18.97■□□□□ 0.63
HDAC7-227ENST00000548080 PDXKO00764 312 aa18.97■□□□□ 0.63
HDAC7-227ENST00000548080 AXLP30530 894 aa18.97■□□□□ 0.63
HDAC7-227ENST00000548080 SMTNP53814 917 aa18.97■□□□□ 0.63
HDAC7-227ENST00000548080 NCKAP1LP55160 1127 aa18.97■□□□□ 0.63
HDAC7-227ENST00000548080 UBASH3AP57075 661 aa18.97■□□□□ 0.63
HDAC7-227ENST00000548080 NCBP1Q09161 790 aaKnown RBP18.97■□□□□ 0.63
HDAC7-227ENST00000548080 BTG3Q14201 252 aaPredicted RBP18.97■□□□□ 0.63
HDAC7-227ENST00000548080 FAM187BQ17R55 369 aa18.97■□□□□ 0.63
HDAC7-227ENST00000548080 ZC2HC1CQ53FD0 456 aaPredicted RBP18.97■□□□□ 0.63
HDAC7-227ENST00000548080 HAUS6Q7Z4H7 955 aa18.97■□□□□ 0.63
HDAC7-227ENST00000548080 IRF2BP1Q8IU81 584 aa18.97■□□□□ 0.63
HDAC7-227ENST00000548080 FAM114A1Q8IWE2 563 aa18.97■□□□□ 0.63
HDAC7-227ENST00000548080 SMG8Q8ND04 991 aaKnown RBP18.97■□□□□ 0.63
HDAC7-227ENST00000548080 ANKRD20A12PQ8NF67 263 aa18.97■□□□□ 0.63
HDAC7-227ENST00000548080 SP7Q8TDD2 431 aaPredicted RBP18.97■□□□□ 0.63
HDAC7-227ENST00000548080 PRIMPOLQ96LW4 560 aa18.97■□□□□ 0.63
HDAC7-227ENST00000548080 C17orf80Q9BSJ5 609 aa18.97■□□□□ 0.63
HDAC7-227ENST00000548080 TARS2Q9BW92 718 aaKnown RBP18.97■□□□□ 0.63
HDAC7-227ENST00000548080 RNF39Q9H2S5 420 aa18.97■□□□□ 0.63
HDAC7-227ENST00000548080 NXF3Q9H4D5 531 aaKnown RBP18.97■□□□□ 0.63
HDAC7-227ENST00000548080 LIMA1Q9UHB6 759 aaKnown RBP18.97■□□□□ 0.63
HDAC7-227ENST00000548080 KCNG1Q9UIX4 513 aa18.97■□□□□ 0.63
HDAC7-227ENST00000548080 EPOPA6NHQ4 379 aa18.97■□□□□ 0.63
HDAC7-227ENST00000548080 KCNJ18B7U540 433 aa18.97■□□□□ 0.63
HDAC7-227ENST00000548080 RFXAPO00287 272 aa18.97■□□□□ 0.63
HDAC7-227ENST00000548080 PPP1R37O75864 691 aa18.97■□□□□ 0.63
HDAC7-227ENST00000548080 FKBP3Q00688 224 aaKnown RBP18.97■□□□□ 0.63
HDAC7-227ENST00000548080 KCNJ12Q14500 433 aa18.97■□□□□ 0.63
HDAC7-227ENST00000548080 GRIN2CQ14957 1233 aa18.97■□□□□ 0.63
HDAC7-227ENST00000548080 EDRF1Q3B7T1 1238 aa18.97■□□□□ 0.63
HDAC7-227ENST00000548080 TCP11X2Q5H9J9 407 aa18.97■□□□□ 0.63
HDAC7-227ENST00000548080 SLC27A1Q6PCB7 646 aa18.97■□□□□ 0.63
HDAC7-227ENST00000548080 ARNTL2Q8WYA1 636 aa18.97■□□□□ 0.63
HDAC7-227ENST00000548080 NTPCRQ9BSD7 190 aaKnown RBP18.97■□□□□ 0.63
HDAC7-227ENST00000548080 PRDM12Q9H4Q4 367 aa18.97■□□□□ 0.63
HDAC7-227ENST00000548080 MAGEC2Q9UBF1 373 aaPredicted RBP18.97■□□□□ 0.63
HDAC7-227ENST00000548080 TRAF3IP3Q9Y228 551 aa18.97■□□□□ 0.63
HDAC7-227ENST00000548080 INPP5FQ9Y2H2 1132 aa18.97■□□□□ 0.63
HDAC7-227ENST00000548080 IPPQ9Y573 584 aa18.97■□□□□ 0.63
HDAC7-227ENST00000548080 MRPL42Q9Y6G3 142 aaKnown RBP18.97■□□□□ 0.63
HDAC7-227ENST00000548080 A0A1B0GUA9 196 aa18.96■□□□□ 0.63
HDAC7-227ENST00000548080 CALUO43852 315 aaPredicted RBP18.96■□□□□ 0.63
HDAC7-227ENST00000548080 EEF1GP26641 437 aaKnown RBP18.96■□□□□ 0.63
HDAC7-227ENST00000548080 RAB27AP51159 221 aa18.96■□□□□ 0.63
HDAC7-227ENST00000548080 PCBP1Q15365 356 aaKnown RBP eCLIP18.96■□□□□ 0.63
HDAC7-227ENST00000548080 ATF7IP2Q5U623 682 aa18.96■□□□□ 0.63
HDAC7-227ENST00000548080 AGMOQ6ZNB7 445 aa18.96■□□□□ 0.63
HDAC7-227ENST00000548080 ZBTB33Q86T24 672 aa18.96■□□□□ 0.63
HDAC7-227ENST00000548080 FIBCD1Q8N539 461 aa18.96■□□□□ 0.63
HDAC7-227ENST00000548080 ZBTB45Q96K62 511 aaPredicted RBP18.96■□□□□ 0.63
HDAC7-227ENST00000548080 NAP1L5Q96NT1 182 aaPredicted RBP18.96■□□□□ 0.63
HDAC7-227ENST00000548080 TRIM6Q9C030 488 aaPredicted RBP18.96■□□□□ 0.63
HDAC7-227ENST00000548080 IKZF4Q9H2S9 585 aa18.96■□□□□ 0.63
HDAC7-227ENST00000548080 TMEM134Q9H6X4 195 aa18.96■□□□□ 0.63
HDAC7-227ENST00000548080 ELAC1Q9H777 363 aaKnown RBP18.96■□□□□ 0.63
HDAC7-227ENST00000548080 TYW1Q9NV66 732 aaKnown RBP18.96■□□□□ 0.63
HDAC7-227ENST00000548080 LRRC10BA6NIK2 292 aa18.95■□□□□ 0.62
HDAC7-227ENST00000548080 TPM3P06753 285 aa18.95■□□□□ 0.62
HDAC7-227ENST00000548080 HARSP12081 509 aaKnown RBP18.95■□□□□ 0.62
HDAC7-227ENST00000548080 AKAP5P24588 427 aa18.95■□□□□ 0.62
HDAC7-227ENST00000548080 AFF1P51825 1210 aaKnown RBP18.95■□□□□ 0.62
HDAC7-227ENST00000548080 GTF2BQ00403 316 aa18.95■□□□□ 0.62
HDAC7-227ENST00000548080 KCNA1Q09470 495 aa18.95■□□□□ 0.62
HDAC7-227ENST00000548080 KRT31Q15323 416 aa18.95■□□□□ 0.62
HDAC7-227ENST00000548080 LRRC55Q6ZSA7 311 aa18.95■□□□□ 0.62
HDAC7-227ENST00000548080 APTXQ7Z2E3 356 aaKnown RBP18.95■□□□□ 0.62
HDAC7-227ENST00000548080 DRC7Q8IY82 874 aa18.95■□□□□ 0.62
HDAC7-227ENST00000548080 CEP63Q96MT8 703 aa18.95■□□□□ 0.62
HDAC7-227ENST00000548080 CASD1Q96PB1 797 aa18.95■□□□□ 0.62
HDAC7-227ENST00000548080 ACCSQ96QU6 501 aa18.95■□□□□ 0.62
HDAC7-227ENST00000548080 ACO2Q99798 780 aaKnown RBP18.95■□□□□ 0.62
HDAC7-227ENST00000548080 TRAIPQ9BWF2 469 aa18.95■□□□□ 0.62
HDAC7-227ENST00000548080 COL4A4P53420 1690 aaPredicted RBP18.94■□□□□ 0.62
HDAC7-227ENST00000548080 H0YCG3 227 aa18.94■□□□□ 0.62
HDAC7-227ENST00000548080 N4BP3O15049 544 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms