RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 TRAF3IP3Q9Y228 551 aa25.27■■□□□ 1.64
SMARCD1-203ENST00000547247 PSMA7O14818 248 aa25.27■■□□□ 1.64
SMARCD1-203ENST00000547247 CALUO43852 315 aaPredicted RBP25.27■■□□□ 1.64
SMARCD1-203ENST00000547247 FAM189A1O60320 539 aa25.27■■□□□ 1.64
SMARCD1-203ENST00000547247 CD44P16070 742 aaKnown RBP25.27■■□□□ 1.64
SMARCD1-203ENST00000547247 GATMP50440 423 aa25.27■■□□□ 1.64
SMARCD1-203ENST00000547247 RABGGTBP53611 331 aa25.27■■□□□ 1.64
SMARCD1-203ENST00000547247 C12orf56Q8IXR9 622 aa25.27■■□□□ 1.64
SMARCD1-203ENST00000547247 TMEM192Q8IY95 271 aa25.27■■□□□ 1.64
SMARCD1-203ENST00000547247 RSPH1Q8WYR4 309 aa25.27■■□□□ 1.64
SMARCD1-203ENST00000547247 DHTKD1Q96HY7 919 aaPredicted RBP25.27■■□□□ 1.64
SMARCD1-203ENST00000547247 TOPORSQ9NS56 1045 aaPredicted RBP25.27■■□□□ 1.64
SMARCD1-203ENST00000547247 GBF1Q92538 1859 aa25.26■■□□□ 1.63
SMARCD1-203ENST00000547247 PPP1R3GB7ZBB8 358 aa25.26■■□□□ 1.63
SMARCD1-203ENST00000547247 OFD1O75665 1012 aa25.26■■□□□ 1.63
SMARCD1-203ENST00000547247 NLRP12P59046 1061 aa25.26■■□□□ 1.63
SMARCD1-203ENST00000547247 CENPPQ6IPU0 288 aa25.26■■□□□ 1.63
SMARCD1-203ENST00000547247 MLKLQ8NB16 471 aa25.26■■□□□ 1.63
SMARCD1-203ENST00000547247 LRCH3Q96II8 777 aa25.26■■□□□ 1.63
SMARCD1-203ENST00000547247 CASD1Q96PB1 797 aa25.26■■□□□ 1.63
SMARCD1-203ENST00000547247 GAD1Q99259 594 aa25.26■■□□□ 1.63
SMARCD1-203ENST00000547247 SEMA6BQ9H3T3 888 aa25.26■■□□□ 1.63
SMARCD1-203ENST00000547247 RC3H2Q9HBD1 1191 aaKnown RBP25.26■■□□□ 1.63
SMARCD1-203ENST00000547247 HSPBP1Q9NZL4 362 aa25.26■■□□□ 1.63
SMARCD1-203ENST00000547247 PCDHA11Q9Y5I1 949 aa25.26■■□□□ 1.63
SMARCD1-203ENST00000547247 ARL5CA6NH57 179 aa25.25■■□□□ 1.63
SMARCD1-203ENST00000547247 TBKBP1A7MCY6 615 aa25.25■■□□□ 1.63
SMARCD1-203ENST00000547247 MLH1P40692 756 aa25.25■■□□□ 1.63
SMARCD1-203ENST00000547247 ACOT2P49753 483 aa25.25■■□□□ 1.63
SMARCD1-203ENST00000547247 ZBTB41Q5SVQ8 909 aa25.25■■□□□ 1.63
SMARCD1-203ENST00000547247 KLHL10Q6JEL2 608 aa25.25■■□□□ 1.63
SMARCD1-203ENST00000547247 SASS6Q6UVJ0 657 aa25.25■■□□□ 1.63
SMARCD1-203ENST00000547247 GPD1LQ8N335 351 aa25.25■■□□□ 1.63
SMARCD1-203ENST00000547247 SAAL1Q96ER3 474 aa25.25■■□□□ 1.63
SMARCD1-203ENST00000547247 KLK14Q9P0G3 267 aa25.25■■□□□ 1.63
SMARCD1-203ENST00000547247 CPSF3Q9UKF6 684 aaKnown RBP25.25■■□□□ 1.63
SMARCD1-203ENST00000547247 INPP5FQ9Y2H2 1132 aa25.25■■□□□ 1.63
SMARCD1-203ENST00000547247 EXTL3O43909 919 aa25.24■■□□□ 1.63
SMARCD1-203ENST00000547247 TNFSF9P41273 254 aa25.24■■□□□ 1.63
SMARCD1-203ENST00000547247 CYP2J2P51589 502 aa25.24■■□□□ 1.63
SMARCD1-203ENST00000547247 SMAD3P84022 425 aaKnown RBP25.24■■□□□ 1.63
SMARCD1-203ENST00000547247 BTG3Q14201 252 aaPredicted RBP25.24■■□□□ 1.63
SMARCD1-203ENST00000547247 PAN2Q504Q3 1202 aaKnown RBP25.24■■□□□ 1.63
SMARCD1-203ENST00000547247 ZCWPW2Q504Y3 356 aa25.24■■□□□ 1.63
SMARCD1-203ENST00000547247 NOMO2Q5JPE7 1267 aa25.24■■□□□ 1.63
SMARCD1-203ENST00000547247 CMTR2Q8IYT2 770 aaKnown RBP25.24■■□□□ 1.63
SMARCD1-203ENST00000547247 URGCPQ8TCY9 931 aa25.24■■□□□ 1.63
SMARCD1-203ENST00000547247 TMEM174Q8WUU8 243 aa25.24■■□□□ 1.63
SMARCD1-203ENST00000547247 P2RX5Q93086 422 aa25.24■■□□□ 1.63
SMARCD1-203ENST00000547247 ZFP42Q96MM3 310 aa25.24■■□□□ 1.63
SMARCD1-203ENST00000547247 RPS6KC1Q96S38 1066 aa25.24■■□□□ 1.63
SMARCD1-203ENST00000547247 TSG101Q99816 390 aa25.24■■□□□ 1.63
SMARCD1-203ENST00000547247 FAM213AQ9BRX8 229 aa25.24■■□□□ 1.63
SMARCD1-203ENST00000547247 RPF1Q9H9Y2 349 aaKnown RBP25.24■■□□□ 1.63
SMARCD1-203ENST00000547247 INPPL1O15357 1258 aa25.23■■□□□ 1.63
SMARCD1-203ENST00000547247 LETM1O95202 739 aaPredicted RBP25.23■■□□□ 1.63
SMARCD1-203ENST00000547247 CCNE1P24864 410 aa25.23■■□□□ 1.63
SMARCD1-203ENST00000547247 RAB30Q15771 203 aa25.23■■□□□ 1.63
SMARCD1-203ENST00000547247 SLC9A9Q8IVB4 645 aa25.23■■□□□ 1.63
SMARCD1-203ENST00000547247 XXYLT1Q8NBI6 393 aa25.23■■□□□ 1.63
SMARCD1-203ENST00000547247 ZSWIM2Q8NEG5 633 aa25.23■■□□□ 1.63
SMARCD1-203ENST00000547247 NOC3LQ8WTT2 800 aaKnown RBP25.23■■□□□ 1.63
SMARCD1-203ENST00000547247 MRPL9Q9BYD2 267 aaKnown RBP25.23■■□□□ 1.63
SMARCD1-203ENST00000547247 PBX4Q9BYU1 374 aa25.23■■□□□ 1.63
SMARCD1-203ENST00000547247 KIAA1586Q9HCI6 787 aa25.23■■□□□ 1.63
SMARCD1-203ENST00000547247 KANSL3Q9P2N6 904 aa25.23■■□□□ 1.63
SMARCD1-203ENST00000547247 MSRAQ9UJ68 235 aa25.23■■□□□ 1.63
SMARCD1-203ENST00000547247 GOLGA8IPA6NC78 632 aa25.22■■□□□ 1.63
SMARCD1-203ENST00000547247 GOLGA8JA6NMD2 632 aa25.22■■□□□ 1.63
SMARCD1-203ENST00000547247 NR3C1P04150 777 aa25.22■■□□□ 1.63
SMARCD1-203ENST00000547247 POU5F1Q01860 360 aaKnown RBP25.22■■□□□ 1.63
SMARCD1-203ENST00000547247 LRRC63Q05C16 580 aa25.22■■□□□ 1.63
SMARCD1-203ENST00000547247 MYBPC2Q14324 1141 aa25.22■■□□□ 1.63
SMARCD1-203ENST00000547247 HSP90AA2PQ14568 343 aaPredicted RBP25.22■■□□□ 1.63
SMARCD1-203ENST00000547247 ENOX2Q16206 610 aaKnown RBP25.22■■□□□ 1.63
SMARCD1-203ENST00000547247 NFIL3Q16649 462 aa25.22■■□□□ 1.63
SMARCD1-203ENST00000547247 EDRF1Q3B7T1 1238 aa25.22■■□□□ 1.63
SMARCD1-203ENST00000547247 SLC10A6Q3KNW5 377 aa25.22■■□□□ 1.63
SMARCD1-203ENST00000547247 CRELD2Q6UXH1 353 aaPredicted RBP25.22■■□□□ 1.63
SMARCD1-203ENST00000547247 SP7Q8TDD2 431 aaPredicted RBP25.22■■□□□ 1.63
SMARCD1-203ENST00000547247 DMAC2Q9NW81 257 aa25.22■■□□□ 1.63
SMARCD1-203ENST00000547247 DACH1Q9UI36 760 aa25.22■■□□□ 1.63
SMARCD1-203ENST00000547247 FNDC1Q4ZHG4 1894 aaPredicted RBP25.22■■□□□ 1.63
SMARCD1-203ENST00000547247 CXCL8P10145 99 aa25.22■■□□□ 1.63
SMARCD1-203ENST00000547247 MYOGP15173 224 aa25.22■■□□□ 1.63
SMARCD1-203ENST00000547247 RPL13P26373 211 aaKnown RBP25.22■■□□□ 1.63
SMARCD1-203ENST00000547247 PBX2P40425 430 aa25.22■■□□□ 1.63
SMARCD1-203ENST00000547247 AFF1P51825 1210 aaKnown RBP25.22■■□□□ 1.63
SMARCD1-203ENST00000547247 DPCR1Q3MIW9 517 aa25.22■■□□□ 1.63
SMARCD1-203ENST00000547247 LRRC43Q8N309 656 aa25.22■■□□□ 1.63
SMARCD1-203ENST00000547247 NELFBQ8WX92 580 aa25.22■■□□□ 1.63
SMARCD1-203ENST00000547247 SNX27Q96L92 541 aa25.22■■□□□ 1.63
SMARCD1-203ENST00000547247 FBXL18Q96ME1 805 aa25.22■■□□□ 1.63
SMARCD1-203ENST00000547247 PLEKHA5Q9HAU0 1116 aa25.22■■□□□ 1.63
SMARCD1-203ENST00000547247 COL4A6Q14031 1691 aa25.21■■□□□ 1.63
SMARCD1-203ENST00000547247 BICDL2A1A5D9 508 aa25.21■■□□□ 1.63
SMARCD1-203ENST00000547247 EXOC3O60645 756 aa25.21■■□□□ 1.63
SMARCD1-203ENST00000547247 NR2F2P24468 414 aa25.21■■□□□ 1.63
SMARCD1-203ENST00000547247 SCNN1GP51170 649 aa25.21■■□□□ 1.63
SMARCD1-203ENST00000547247 PMS1P54277 932 aaKnown RBP25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms