RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 RAB39AQ14964 217 aa7.78□□□□□ -1.16
NPAS3-204ENST00000546849 PRAMEF14Q5SWL7 426 aa7.78□□□□□ -1.16
NPAS3-204ENST00000546849 TRMT2AQ8IZ69 625 aaKnown RBP7.78□□□□□ -1.16
NPAS3-204ENST00000546849 HOXB13Q92826 284 aaPredicted RBP7.78□□□□□ -1.16
NPAS3-204ENST00000546849 TMEM176AQ96HP8 235 aa7.78□□□□□ -1.16
NPAS3-204ENST00000546849 FAM193BQ96PV7 902 aaPredicted RBP7.78□□□□□ -1.16
NPAS3-204ENST00000546849 TAAR9Q96RI9 348 aa7.78□□□□□ -1.16
NPAS3-204ENST00000546849 POLHQ9Y253 713 aa7.78□□□□□ -1.16
NPAS3-204ENST00000546849 FRMPD2Q68DX3 1309 aaPredicted RBP7.78□□□□□ -1.16
NPAS3-204ENST00000546849 MYBBP1AQ9BQG0 1328 aaKnown RBP7.78□□□□□ -1.16
NPAS3-204ENST00000546849 PMS2P1A4D2B8 440 aa7.77□□□□□ -1.17
NPAS3-204ENST00000546849 SLC16A6O15403 523 aa7.77□□□□□ -1.17
NPAS3-204ENST00000546849 PLIN1O60240 522 aa7.77□□□□□ -1.17
NPAS3-204ENST00000546849 SMARCA1P28370 1054 aa7.77□□□□□ -1.17
NPAS3-204ENST00000546849 GLB1LQ6UWU2 654 aa7.77□□□□□ -1.17
NPAS3-204ENST00000546849 FRMD5Q7Z6J6 570 aa7.77□□□□□ -1.17
NPAS3-204ENST00000546849 TAX1BP1Q86VP1 789 aa7.77□□□□□ -1.17
NPAS3-204ENST00000546849 ZBTB34Q8NCN2 500 aa7.77□□□□□ -1.17
NPAS3-204ENST00000546849 REPS2Q8NFH8 660 aa7.77□□□□□ -1.17
NPAS3-204ENST00000546849 CFHR4Q92496 578 aa7.77□□□□□ -1.17
NPAS3-204ENST00000546849 MTFMTQ96DP5 389 aaKnown RBP7.77□□□□□ -1.17
NPAS3-204ENST00000546849 ACO2Q99798 780 aaKnown RBP7.77□□□□□ -1.17
NPAS3-204ENST00000546849 PLA2G12BQ9BX93 195 aa7.77□□□□□ -1.17
NPAS3-204ENST00000546849 ARIH2O95376 493 aa7.76□□□□□ -1.17
NPAS3-204ENST00000546849 MYBP10242 640 aa7.76□□□□□ -1.17
NPAS3-204ENST00000546849 GNAT2P19087 354 aa7.76□□□□□ -1.17
NPAS3-204ENST00000546849 DDCP20711 480 aa7.76□□□□□ -1.17
NPAS3-204ENST00000546849 IL12RB1P42701 662 aa7.76□□□□□ -1.17
NPAS3-204ENST00000546849 SP140Q13342 867 aa7.76□□□□□ -1.17
NPAS3-204ENST00000546849 DGKHQ86XP1 1220 aa7.76□□□□□ -1.17
NPAS3-204ENST00000546849 CCDC146Q8IYE0 955 aa7.76□□□□□ -1.17
NPAS3-204ENST00000546849 PRR18Q8N4B5 295 aa7.76□□□□□ -1.17
NPAS3-204ENST00000546849 C3orf20Q8ND61 904 aa7.76□□□□□ -1.17
NPAS3-204ENST00000546849 STON2Q8WXE9 905 aa7.76□□□□□ -1.17
NPAS3-204ENST00000546849 RUNDC1Q96C34 613 aa7.76□□□□□ -1.17
NPAS3-204ENST00000546849 KCNC2Q96PR1 638 aa7.76□□□□□ -1.17
NPAS3-204ENST00000546849 GABBR1Q9UBS5 961 aa7.76□□□□□ -1.17
NPAS3-204ENST00000546849 RUVBL1Q9Y265 456 aaKnown RBP7.76□□□□□ -1.17
NPAS3-204ENST00000546849 H3BML4 177 aa7.75□□□□□ -1.17
NPAS3-204ENST00000546849 GNALP38405 381 aa7.75□□□□□ -1.17
NPAS3-204ENST00000546849 SLC6A9P48067 706 aa7.75□□□□□ -1.17
NPAS3-204ENST00000546849 HHEXQ03014 270 aa7.75□□□□□ -1.17
NPAS3-204ENST00000546849 SAFB2Q14151 953 aaKnown RBP eCLIP7.75□□□□□ -1.17
NPAS3-204ENST00000546849 GRM7Q14831 915 aa7.75□□□□□ -1.17
NPAS3-204ENST00000546849 FKBP15Q5T1M5 1219 aa7.75□□□□□ -1.17
NPAS3-204ENST00000546849 MFSD5Q6N075 450 aa7.75□□□□□ -1.17
NPAS3-204ENST00000546849 FAM111BQ6SJ93 734 aa7.75□□□□□ -1.17
NPAS3-204ENST00000546849 KSR2Q6VAB6 950 aa7.75□□□□□ -1.17
NPAS3-204ENST00000546849 ADGRE4PQ86SQ3 457 aa7.75□□□□□ -1.17
NPAS3-204ENST00000546849 DAAM2Q86T65 1068 aa7.75□□□□□ -1.17
NPAS3-204ENST00000546849 CASKIN2Q8WXE0 1202 aa7.75□□□□□ -1.17
NPAS3-204ENST00000546849 CDK5RAP3Q96JB5 506 aa7.75□□□□□ -1.17
NPAS3-204ENST00000546849 GNRHR2Q96P88 292 aa7.75□□□□□ -1.17
NPAS3-204ENST00000546849 PARD6AQ9NPB6 346 aa7.75□□□□□ -1.17
NPAS3-204ENST00000546849 FEZ2Q9UHY8 353 aaPredicted RBP7.75□□□□□ -1.17
NPAS3-204ENST00000546849 SIK3Q9Y2K2 1263 aa7.75□□□□□ -1.17
NPAS3-204ENST00000546849 STXBP5LQ9Y2K9 1186 aa7.75□□□□□ -1.17
NPAS3-204ENST00000546849 OTOL1A6NHN0 477 aaPredicted RBP7.74□□□□□ -1.17
NPAS3-204ENST00000546849 MATN2O00339 956 aa7.74□□□□□ -1.17
NPAS3-204ENST00000546849 PLATP00750 562 aa7.74□□□□□ -1.17
NPAS3-204ENST00000546849 FLT3LGP49771 235 aa7.74□□□□□ -1.17
NPAS3-204ENST00000546849 FXR1P51114 621 aaKnown RBP eCLIP7.74□□□□□ -1.17
NPAS3-204ENST00000546849 ADAM8P78325 824 aa7.74□□□□□ -1.17
NPAS3-204ENST00000546849 TARDBPQ13148 414 aaKnown RBP eCLIP7.74□□□□□ -1.17
NPAS3-204ENST00000546849 CCSAPQ6IQ19 270 aaPredicted RBP7.74□□□□□ -1.17
NPAS3-204ENST00000546849 B3GNT9Q6UX72 402 aa7.74□□□□□ -1.17
NPAS3-204ENST00000546849 ZNF572Q7Z3I7 529 aaPredicted RBP7.74□□□□□ -1.17
NPAS3-204ENST00000546849 CIR1Q86X95 450 aaPredicted RBP7.74□□□□□ -1.17
NPAS3-204ENST00000546849 NSUN6Q8TEA1 469 aaKnown RBP7.74□□□□□ -1.17
NPAS3-204ENST00000546849 TTC17Q96AE7 1141 aa7.74□□□□□ -1.17
NPAS3-204ENST00000546849 CGRRF1Q99675 332 aa7.74□□□□□ -1.17
NPAS3-204ENST00000546849 ADAM7Q9H2U9 754 aa7.74□□□□□ -1.17
NPAS3-204ENST00000546849 LMBRD1Q9NUN5 540 aa7.74□□□□□ -1.17
NPAS3-204ENST00000546849 PCDHB1Q9Y5F3 818 aa7.74□□□□□ -1.17
NPAS3-204ENST00000546849 DUSP10Q9Y6W6 482 aa7.74□□□□□ -1.17
NPAS3-204ENST00000546849 B5MCH6 92 aa7.73□□□□□ -1.17
NPAS3-204ENST00000546849 FAM227AF5H4B4 570 aa7.73□□□□□ -1.17
NPAS3-204ENST00000546849 H3BUI4 141 aa7.73□□□□□ -1.17
NPAS3-204ENST00000546849 IPO13O94829 963 aaKnown RBP7.73□□□□□ -1.17
NPAS3-204ENST00000546849 UBXN7O94888 489 aa7.73□□□□□ -1.17
NPAS3-204ENST00000546849 MYL1P05976 194 aa7.73□□□□□ -1.17
NPAS3-204ENST00000546849 ATP5JP18859 108 aa7.73□□□□□ -1.17
NPAS3-204ENST00000546849 HTR1BP28222 390 aa7.73□□□□□ -1.17
NPAS3-204ENST00000546849 NOGQ13253 232 aa7.73□□□□□ -1.17
NPAS3-204ENST00000546849 GBX1Q14549 363 aa7.73□□□□□ -1.17
NPAS3-204ENST00000546849 GRM3Q14832 879 aa7.73□□□□□ -1.17
NPAS3-204ENST00000546849 AFMIDQ63HM1 303 aa7.73□□□□□ -1.17
NPAS3-204ENST00000546849 CCDC149Q6ZUS6 474 aa7.73□□□□□ -1.17
NPAS3-204ENST00000546849 GPR135Q8IZ08 494 aa7.73□□□□□ -1.17
NPAS3-204ENST00000546849 LILRA3Q8N6C8 439 aaPredicted RBP7.73□□□□□ -1.17
NPAS3-204ENST00000546849 PPP1R35Q8TAP8 253 aa7.73□□□□□ -1.17
NPAS3-204ENST00000546849 PTPN18Q99952 460 aa7.73□□□□□ -1.17
NPAS3-204ENST00000546849 MEGF9Q9H1U4 602 aa7.73□□□□□ -1.17
NPAS3-204ENST00000546849 CNNM1Q9NRU3 951 aa7.73□□□□□ -1.17
NPAS3-204ENST00000546849 CALCOCO1Q9P1Z2 691 aa7.73□□□□□ -1.17
NPAS3-204ENST00000546849 NR2E3Q9Y5X4 410 aa7.73□□□□□ -1.17
NPAS3-204ENST00000546849 ACTL7AQ9Y615 435 aa7.73□□□□□ -1.17
NPAS3-204ENST00000546849 ZMYM3Q14202 1370 aa7.72□□□□□ -1.17
NPAS3-204ENST00000546849 PRR5-ARHGAP8B1AHC4 643 aa7.72□□□□□ -1.17
NPAS3-204ENST00000546849 ALDH2P05091 517 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms