RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 ACAP3Q96P50 834 aa18.39■□□□□ 0.53
LTBR-215ENST00000546296 GBP4Q96PP9 640 aa18.39■□□□□ 0.53
LTBR-215ENST00000546296 C11orf84Q9BUA3 381 aaPredicted RBP18.39■□□□□ 0.53
LTBR-215ENST00000546296 MSTO1Q9BUK6 570 aa18.39■□□□□ 0.53
LTBR-215ENST00000546296 TMEM206Q9H813 350 aa18.39■□□□□ 0.53
LTBR-215ENST00000546296 SLC39A2Q9NP94 309 aa18.39■□□□□ 0.53
LTBR-215ENST00000546296 TOPORSQ9NS56 1045 aaPredicted RBP18.39■□□□□ 0.53
LTBR-215ENST00000546296 ANKRD63C9JTQ0 380 aa18.38■□□□□ 0.53
LTBR-215ENST00000546296 C5orf67F2Z3F1 127 aa18.38■□□□□ 0.53
LTBR-215ENST00000546296 H3BNC9 293 aa18.38■□□□□ 0.53
LTBR-215ENST00000546296 KLRC4O43908 158 aa18.38■□□□□ 0.53
LTBR-215ENST00000546296 ZC3H11AO75152 810 aaKnown RBP eCLIP18.38■□□□□ 0.53
LTBR-215ENST00000546296 FOSL2P15408 326 aa18.38■□□□□ 0.53
LTBR-215ENST00000546296 ALDH7A1P49419 539 aaKnown RBP18.38■□□□□ 0.53
LTBR-215ENST00000546296 BCAR1P56945 870 aa18.38■□□□□ 0.53
LTBR-215ENST00000546296 PSMD2Q13200 908 aa18.38■□□□□ 0.53
LTBR-215ENST00000546296 POSTNQ15063 836 aa18.38■□□□□ 0.53
LTBR-215ENST00000546296 KYAT1Q16773 422 aa18.38■□□□□ 0.53
LTBR-215ENST00000546296 KCNT2Q6UVM3 1135 aa18.38■□□□□ 0.53
LTBR-215ENST00000546296 ZNF280BQ86YH2 543 aa18.38■□□□□ 0.53
LTBR-215ENST00000546296 CEP120Q8N960 986 aa18.38■□□□□ 0.53
LTBR-215ENST00000546296 KLHL23Q8NBE8 558 aa18.38■□□□□ 0.53
LTBR-215ENST00000546296 GLIS3Q8NEA6 775 aa18.38■□□□□ 0.53
LTBR-215ENST00000546296 TIGD1Q96MW7 591 aa18.38■□□□□ 0.53
LTBR-215ENST00000546296 IKZF4Q9H2S9 585 aa18.38■□□□□ 0.53
LTBR-215ENST00000546296 NRDE2Q9H7Z3 1164 aa18.38■□□□□ 0.53
LTBR-215ENST00000546296 MIOSQ9NXC5 875 aa18.38■□□□□ 0.53
LTBR-215ENST00000546296 SZT2Q5T011 3432 aa18.37■□□□□ 0.53
LTBR-215ENST00000546296 A0A0B4J269 797 aa18.37■□□□□ 0.53
LTBR-215ENST00000546296 INPPL1O15357 1258 aa18.37■□□□□ 0.53
LTBR-215ENST00000546296 EIF3DO15371 548 aaKnown RBP eCLIP18.37■□□□□ 0.53
LTBR-215ENST00000546296 PBX3P40426 434 aa18.37■□□□□ 0.53
LTBR-215ENST00000546296 EHHADHQ08426 723 aa18.37■□□□□ 0.53
LTBR-215ENST00000546296 DPYDQ12882 1025 aa18.37■□□□□ 0.53
LTBR-215ENST00000546296 SEZ6Q53EL9 994 aa18.37■□□□□ 0.53
LTBR-215ENST00000546296 SLC39A4Q6P5W5 647 aa18.37■□□□□ 0.53
LTBR-215ENST00000546296 CLEC17AQ6ZS10 378 aa18.37■□□□□ 0.53
LTBR-215ENST00000546296 POMGNT1Q8WZA1 660 aa18.37■□□□□ 0.53
LTBR-215ENST00000546296 P2RX5Q93086 422 aa18.37■□□□□ 0.53
LTBR-215ENST00000546296 HAPLN2Q9GZV7 340 aa18.37■□□□□ 0.53
LTBR-215ENST00000546296 SPG21Q9NZD8 308 aa18.37■□□□□ 0.53
LTBR-215ENST00000546296 ZMYM2Q9UBW7 1377 aa18.37■□□□□ 0.53
LTBR-215ENST00000546296 CARNS1A5YM72 827 aa18.36■□□□□ 0.53
LTBR-215ENST00000546296 TISP43B9A030 160 aa18.36■□□□□ 0.53
LTBR-215ENST00000546296 OGTO15294 1046 aa18.36■□□□□ 0.53
LTBR-215ENST00000546296 DDHD2O94830 711 aa18.36■□□□□ 0.53
LTBR-215ENST00000546296 SMC2O95347 1197 aa18.36■□□□□ 0.53
LTBR-215ENST00000546296 ALDH2P05091 517 aa18.36■□□□□ 0.53
LTBR-215ENST00000546296 THP07101 528 aa18.36■□□□□ 0.53
LTBR-215ENST00000546296 CLTAP09496 248 aa18.36■□□□□ 0.53
LTBR-215ENST00000546296 PPM1AP35813 382 aa18.36■□□□□ 0.53
LTBR-215ENST00000546296 PNOCQ13519 176 aa18.36■□□□□ 0.53
LTBR-215ENST00000546296 ADGRE1Q14246 886 aa18.36■□□□□ 0.53
LTBR-215ENST00000546296 PTPROQ16827 1216 aa18.36■□□□□ 0.53
LTBR-215ENST00000546296 EPM2AIP1Q7L775 607 aaPredicted RBP18.36■□□□□ 0.53
LTBR-215ENST00000546296 NELFCDQ8IXH7 590 aa18.36■□□□□ 0.53
LTBR-215ENST00000546296 ZNF507Q8TCN5 953 aa18.36■□□□□ 0.53
LTBR-215ENST00000546296 ALG13Q9NP73 1137 aaKnown RBP18.36■□□□□ 0.53
LTBR-215ENST00000546296 DNAJB4Q9UDY4 337 aa18.36■□□□□ 0.53
LTBR-215ENST00000546296 AGO2Q9UKV8 859 aaKnown RBP18.36■□□□□ 0.53
LTBR-215ENST00000546296 PLAGL2Q9UPG8 496 aa18.36■□□□□ 0.53
LTBR-215ENST00000546296 NT5C1B-RDH14C9J2C7 533 aa18.35■□□□□ 0.53
LTBR-215ENST00000546296 TULP1O00294 542 aaPredicted RBP18.35■□□□□ 0.53
LTBR-215ENST00000546296 FGF18O76093 207 aa18.35■□□□□ 0.53
LTBR-215ENST00000546296 OR1G1P47890 313 aa18.35■□□□□ 0.53
LTBR-215ENST00000546296 KRT17Q04695 432 aa18.35■□□□□ 0.53
LTBR-215ENST00000546296 GRIK3Q13003 919 aa18.35■□□□□ 0.53
LTBR-215ENST00000546296 STK4Q13043 487 aa18.35■□□□□ 0.53
LTBR-215ENST00000546296 GSTCDQ8NEC7 633 aa18.35■□□□□ 0.53
LTBR-215ENST00000546296 SCFD1Q8WVM8 642 aa18.35■□□□□ 0.53
LTBR-215ENST00000546296 TMEM175Q9BSA9 504 aa18.35■□□□□ 0.53
LTBR-215ENST00000546296 RPF1Q9H9Y2 349 aaKnown RBP18.35■□□□□ 0.53
LTBR-215ENST00000546296 PUF60Q9UHX1 559 aaKnown RBP18.35■□□□□ 0.53
LTBR-215ENST00000546296 FAN1Q9Y2M0 1017 aa18.35■□□□□ 0.53
LTBR-215ENST00000546296 STYXL1Q9Y6J8 313 aa18.35■□□□□ 0.53
LTBR-215ENST00000546296 CHD7Q9P2D1 2997 aa18.35■□□□□ 0.53
LTBR-215ENST00000546296 UBE4BO95155 1302 aa18.34■□□□□ 0.53
LTBR-215ENST00000546296 GOLGA6L22H0YM25 854 aa18.34■□□□□ 0.53
LTBR-215ENST00000546296 GRM6O15303 877 aa18.34■□□□□ 0.53
LTBR-215ENST00000546296 LPXNO60711 386 aa18.34■□□□□ 0.53
LTBR-215ENST00000546296 ITGB1P05556 798 aa18.34■□□□□ 0.53
LTBR-215ENST00000546296 GALTP07902 379 aa18.34■□□□□ 0.53
LTBR-215ENST00000546296 SLC11A1P49279 550 aa18.34■□□□□ 0.53
LTBR-215ENST00000546296 MICALL1Q8N3F8 863 aa18.34■□□□□ 0.53
LTBR-215ENST00000546296 SPPL3Q8TCT6 385 aa18.34■□□□□ 0.53
LTBR-215ENST00000546296 NOC3LQ8WTT2 800 aaKnown RBP18.34■□□□□ 0.53
LTBR-215ENST00000546296 FAM212AQ96EL1 285 aa18.34■□□□□ 0.53
LTBR-215ENST00000546296 CXCL16Q9H2A7 254 aa18.34■□□□□ 0.53
LTBR-215ENST00000546296 RMND1Q9NWS8 449 aa18.34■□□□□ 0.53
LTBR-215ENST00000546296 FNDC1Q4ZHG4 1894 aaPredicted RBP18.34■□□□□ 0.53
LTBR-215ENST00000546296 SMIM28A0A1B0GU29 152 aa18.33■□□□□ 0.52
LTBR-215ENST00000546296 PTGESO14684 152 aa18.33■□□□□ 0.52
LTBR-215ENST00000546296 RHOBTB3O94955 611 aa18.33■□□□□ 0.52
LTBR-215ENST00000546296 CSPG5O95196 566 aa18.33■□□□□ 0.52
LTBR-215ENST00000546296 CXCL8P10145 99 aa18.33■□□□□ 0.52
LTBR-215ENST00000546296 GARTP22102 1010 aa18.33■□□□□ 0.52
LTBR-215ENST00000546296 ADSSP30520 456 aa18.33■□□□□ 0.52
LTBR-215ENST00000546296 HOXD13P35453 343 aa18.33■□□□□ 0.52
LTBR-215ENST00000546296 TNFSF9P41273 254 aa18.33■□□□□ 0.52
LTBR-215ENST00000546296 ACOT2P49753 483 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms