RNA–Protein interactions for RNA: ENST00000546079.5

CLPTM1-203, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-203ENST00000546079 ANKRD35Q8N283 1001 aa17.69■□□□□ 0.42
CLPTM1-203ENST00000546079 ARHGAP18Q8N392 663 aa17.69■□□□□ 0.42
CLPTM1-203ENST00000546079 SCG3Q8WXD2 468 aaKnown RBP17.69■□□□□ 0.42
CLPTM1-203ENST00000546079 MKNK2Q9HBH9 465 aa17.69■□□□□ 0.42
CLPTM1-203ENST00000546079 PHTF1Q9UMS5 762 aa17.69■□□□□ 0.42
CLPTM1-203ENST00000546079 STX8Q9UNK0 236 aa17.69■□□□□ 0.42
CLPTM1-203ENST00000546079 PTPN22Q9Y2R2 807 aa17.69■□□□□ 0.42
CLPTM1-203ENST00000546079 C10orf71Q711Q0 1435 aa17.68■□□□□ 0.42
CLPTM1-203ENST00000546079 PDXKO00764 312 aa17.68■□□□□ 0.42
CLPTM1-203ENST00000546079 WDR4P57081 412 aaKnown RBP17.68■□□□□ 0.42
CLPTM1-203ENST00000546079 TCEAL1Q15170 157 aa17.68■□□□□ 0.42
CLPTM1-203ENST00000546079 TCERG1LQ5VWI1 586 aa17.68■□□□□ 0.42
CLPTM1-203ENST00000546079 ZNF449Q6P9G9 518 aa17.68■□□□□ 0.42
CLPTM1-203ENST00000546079 TRIM74Q86UV6 250 aa17.68■□□□□ 0.42
CLPTM1-203ENST00000546079 TRIM73Q86UV7 250 aa17.68■□□□□ 0.42
CLPTM1-203ENST00000546079 C12orf50Q8NA57 414 aaPredicted RBP17.68■□□□□ 0.42
CLPTM1-203ENST00000546079 SLCO2A1Q92959 643 aa17.68■□□□□ 0.42
CLPTM1-203ENST00000546079 SAR1AQ9NR31 198 aa17.68■□□□□ 0.42
CLPTM1-203ENST00000546079 NAALADL1Q9UQQ1 740 aa17.68■□□□□ 0.42
CLPTM1-203ENST00000546079 RPS6KL1Q9Y6S9 549 aa17.68■□□□□ 0.42
CLPTM1-203ENST00000546079 NPHP3-ACAD11A0A0J9YXS1 232 aa17.67■□□□□ 0.42
CLPTM1-203ENST00000546079 FAM47DPA6NHR8 397 aa17.67■□□□□ 0.42
CLPTM1-203ENST00000546079 TTC36A6NLP5 189 aa17.67■□□□□ 0.42
CLPTM1-203ENST00000546079 E9PMD0 336 aa17.67■□□□□ 0.42
CLPTM1-203ENST00000546079 SMAPO00193 183 aa17.67■□□□□ 0.42
CLPTM1-203ENST00000546079 SLC16A3O15427 465 aaKnown RBP17.67■□□□□ 0.42
CLPTM1-203ENST00000546079 CALUO43852 315 aaPredicted RBP17.67■□□□□ 0.42
CLPTM1-203ENST00000546079 CREB3O43889 395 aa17.67■□□□□ 0.42
CLPTM1-203ENST00000546079 ECEL1O95672 775 aa17.67■□□□□ 0.42
CLPTM1-203ENST00000546079 ITIH2P19823 946 aa17.67■□□□□ 0.42
CLPTM1-203ENST00000546079 EPM2AIP1Q7L775 607 aaPredicted RBP17.67■□□□□ 0.42
CLPTM1-203ENST00000546079 SRRM1Q8IYB3 904 aaKnown RBP17.67■□□□□ 0.42
CLPTM1-203ENST00000546079 NCSTNQ92542 709 aa17.67■□□□□ 0.42
CLPTM1-203ENST00000546079 GPR101Q96P66 508 aaPredicted RBP17.67■□□□□ 0.42
CLPTM1-203ENST00000546079 PPP1R12CQ9BZL4 782 aa17.67■□□□□ 0.42
CLPTM1-203ENST00000546079 UBE2OQ9C0C9 1292 aaKnown RBP17.67■□□□□ 0.42
CLPTM1-203ENST00000546079 hCG_1984214I3L0E3 225 aa17.67■□□□□ 0.42
CLPTM1-203ENST00000546079 CBX6O95503 412 aa17.67■□□□□ 0.42
CLPTM1-203ENST00000546079 ASMTLO95671 621 aa17.67■□□□□ 0.42
CLPTM1-203ENST00000546079 PYGBP11216 843 aa17.67■□□□□ 0.42
CLPTM1-203ENST00000546079 GSTT1P30711 240 aa17.67■□□□□ 0.42
CLPTM1-203ENST00000546079 GPSM2P81274 684 aa17.67■□□□□ 0.42
CLPTM1-203ENST00000546079 CACNB1Q02641 598 aaPredicted RBP17.67■□□□□ 0.42
CLPTM1-203ENST00000546079 KPNB1Q14974 876 aaKnown RBP17.67■□□□□ 0.42
CLPTM1-203ENST00000546079 GSTA3Q16772 222 aa17.67■□□□□ 0.42
CLPTM1-203ENST00000546079 SPTY2D1Q68D10 685 aaPredicted RBP17.67■□□□□ 0.42
CLPTM1-203ENST00000546079 KRT27Q7Z3Y8 459 aa17.67■□□□□ 0.42
CLPTM1-203ENST00000546079 SLC13A5Q86YT5 568 aaPredicted RBP17.67■□□□□ 0.42
CLPTM1-203ENST00000546079 ZNF713Q8N859 430 aaPredicted RBP17.67■□□□□ 0.42
CLPTM1-203ENST00000546079 WDR66Q8TBY9 1149 aa17.67■□□□□ 0.42
CLPTM1-203ENST00000546079 SH3RF3Q8TEJ3 882 aaPredicted RBP17.67■□□□□ 0.42
CLPTM1-203ENST00000546079 NRG4Q8WWG1 115 aa17.67■□□□□ 0.42
CLPTM1-203ENST00000546079 RPGRQ92834 1020 aaKnown RBP17.67■□□□□ 0.42
CLPTM1-203ENST00000546079 HAS1Q92839 578 aa17.67■□□□□ 0.42
CLPTM1-203ENST00000546079 GBP5Q96PP8 586 aa17.67■□□□□ 0.42
CLPTM1-203ENST00000546079 LRRC19Q9H756 370 aa17.67■□□□□ 0.42
CLPTM1-203ENST00000546079 MARCKSL1P49006 195 aa17.66■□□□□ 0.42
CLPTM1-203ENST00000546079 CASP5P51878 434 aa17.66■□□□□ 0.42
CLPTM1-203ENST00000546079 SLC34A1Q06495 639 aa17.66■□□□□ 0.42
CLPTM1-203ENST00000546079 SIX1Q15475 284 aaPredicted RBP17.66■□□□□ 0.42
CLPTM1-203ENST00000546079 KYNUQ16719 465 aa17.66■□□□□ 0.42
CLPTM1-203ENST00000546079 PABPC1LQ4VXU2 614 aaKnown RBP17.66■□□□□ 0.42
CLPTM1-203ENST00000546079 SLC45A4Q5BKX6 768 aa17.66■□□□□ 0.42
CLPTM1-203ENST00000546079 DZIP1Q86YF9 867 aaKnown RBP17.66■□□□□ 0.42
CLPTM1-203ENST00000546079 HOMEZQ8IX15 550 aa17.66■□□□□ 0.42
CLPTM1-203ENST00000546079 OPTNQ96CV9 577 aa17.66■□□□□ 0.42
CLPTM1-203ENST00000546079 DYNLL2Q96FJ2 89 aa17.66■□□□□ 0.42
CLPTM1-203ENST00000546079 CCDC28BQ9BUN5 200 aa17.66■□□□□ 0.42
CLPTM1-203ENST00000546079 VCX3BQ9H321 246 aa17.66■□□□□ 0.42
CLPTM1-203ENST00000546079 ZWILCHQ9H900 591 aa17.66■□□□□ 0.42
CLPTM1-203ENST00000546079 VCX3AQ9NNX9 186 aa17.66■□□□□ 0.42
CLPTM1-203ENST00000546079 KIAA1024Q9UPX6 916 aa17.66■□□□□ 0.42
CLPTM1-203ENST00000546079 SLC4A7Q9Y6M7 1214 aa17.66■□□□□ 0.42
CLPTM1-203ENST00000546079 IMPDH2P12268 514 aa17.66■□□□□ 0.42
CLPTM1-203ENST00000546079 TNFAIP3P21580 790 aa17.66■□□□□ 0.42
CLPTM1-203ENST00000546079 RPL13P26373 211 aaKnown RBP17.66■□□□□ 0.42
CLPTM1-203ENST00000546079 HOXD13P35453 343 aa17.66■□□□□ 0.42
CLPTM1-203ENST00000546079 KCNJ1P48048 391 aa17.66■□□□□ 0.42
CLPTM1-203ENST00000546079 DNAJC3Q13217 504 aa17.66■□□□□ 0.42
CLPTM1-203ENST00000546079 DRAP1Q14919 205 aaPredicted RBP17.66■□□□□ 0.42
CLPTM1-203ENST00000546079 GRIK5Q16478 980 aa17.66■□□□□ 0.42
CLPTM1-203ENST00000546079 TMEM63BQ5T3F8 832 aa17.66■□□□□ 0.42
CLPTM1-203ENST00000546079 ZNF444Q8N0Y2 327 aaPredicted RBP17.66■□□□□ 0.42
CLPTM1-203ENST00000546079 MORC4Q8TE76 937 aa17.66■□□□□ 0.42
CLPTM1-203ENST00000546079 C10orf82Q8WW14 230 aa17.66■□□□□ 0.42
CLPTM1-203ENST00000546079 PIGSQ96S52 555 aa17.66■□□□□ 0.42
CLPTM1-203ENST00000546079 NDNQ99608 321 aa17.66■□□□□ 0.42
CLPTM1-203ENST00000546079 TAS2R14Q9NYV8 317 aa17.66■□□□□ 0.42
CLPTM1-203ENST00000546079 PCDHA12Q9UN75 941 aa17.66■□□□□ 0.42
CLPTM1-203ENST00000546079 PHF24Q9UPV7 400 aa17.66■□□□□ 0.42
CLPTM1-203ENST00000546079 TCRBV7S2A1N4TA0A589 114 aa17.65■□□□□ 0.42
CLPTM1-203ENST00000546079 SLC26A4O43511 780 aa17.65■□□□□ 0.42
CLPTM1-203ENST00000546079 EDF1O60869 148 aaKnown RBP17.65■□□□□ 0.42
CLPTM1-203ENST00000546079 PYGMP11217 842 aa17.65■□□□□ 0.42
CLPTM1-203ENST00000546079 MUTP22033 750 aa17.65■□□□□ 0.42
CLPTM1-203ENST00000546079 CHKAP35790 457 aa17.65■□□□□ 0.42
CLPTM1-203ENST00000546079 SESN3P58005 492 aa17.65■□□□□ 0.42
CLPTM1-203ENST00000546079 CDR2Q01850 454 aa17.65■□□□□ 0.42
CLPTM1-203ENST00000546079 RCN1Q15293 331 aa17.65■□□□□ 0.42
CLPTM1-203ENST00000546079 LRRC74BQ6ZQY2 392 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms