RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 CLDN10P78369 228 aa33.02■■■□□ 2.88
CCM2-219ENST00000544363 APBA1Q02410 837 aa33.02■■■□□ 2.88
CCM2-219ENST00000544363 PTPN11Q06124 597 aaPredicted RBP33.02■■■□□ 2.88
CCM2-219ENST00000544363 TSR1Q2NL82 804 aaKnown RBP33.02■■■□□ 2.88
CCM2-219ENST00000544363 KLHDC7AQ5VTJ3 777 aa33.02■■■□□ 2.88
CCM2-219ENST00000544363 CACNA2D4Q7Z3S7 1137 aa33.02■■■□□ 2.88
CCM2-219ENST00000544363 RSPH3Q86UC2 560 aa33.02■■■□□ 2.88
CCM2-219ENST00000544363 BRSK2Q8IWQ3 736 aa33.02■■■□□ 2.88
CCM2-219ENST00000544363 GLT1D1Q96MS3 346 aa33.02■■■□□ 2.88
CCM2-219ENST00000544363 FNBP1Q96RU3 617 aa33.02■■■□□ 2.88
CCM2-219ENST00000544363 UNC93B1Q9H1C4 597 aa33.02■■■□□ 2.88
CCM2-219ENST00000544363 TMEM8AQ9HCN3 771 aa33.02■■■□□ 2.88
CCM2-219ENST00000544363 CPSF3Q9UKF6 684 aaKnown RBP33.02■■■□□ 2.88
CCM2-219ENST00000544363 A0A1B0GUA9 196 aa33.02■■■□□ 2.88
CCM2-219ENST00000544363 TULP1O00294 542 aaPredicted RBP33.02■■■□□ 2.88
CCM2-219ENST00000544363 MCF2P10911 925 aa33.02■■■□□ 2.88
CCM2-219ENST00000544363 TNFSF9P41273 254 aa33.02■■■□□ 2.88
CCM2-219ENST00000544363 POLR2FP61218 127 aaKnown RBP33.02■■■□□ 2.88
CCM2-219ENST00000544363 SNX17Q15036 470 aa33.02■■■□□ 2.88
CCM2-219ENST00000544363 TRIM65Q6PJ69 517 aa33.02■■■□□ 2.88
CCM2-219ENST00000544363 CATSPER4Q7RTX7 472 aa33.02■■■□□ 2.88
CCM2-219ENST00000544363 BAP1Q92560 729 aa33.02■■■□□ 2.88
CCM2-219ENST00000544363 PDE11AQ9HCR9 933 aa33.02■■■□□ 2.88
CCM2-219ENST00000544363 SIX2Q9NPC8 291 aa33.02■■■□□ 2.88
CCM2-219ENST00000544363 RPLP2P05387 115 aaKnown RBP33.01■■■□□ 2.87
CCM2-219ENST00000544363 SLC9C1Q4G0N8 1177 aa33.01■■■□□ 2.87
CCM2-219ENST00000544363 KRT39Q6A163 491 aa33.01■■■□□ 2.87
CCM2-219ENST00000544363 RPAINQ86UA6 219 aa33.01■■■□□ 2.87
CCM2-219ENST00000544363 EHBP1Q8NDI1 1231 aa33.01■■■□□ 2.87
CCM2-219ENST00000544363 INTS2Q9H0H0 1204 aaKnown RBP33.01■■■□□ 2.87
CCM2-219ENST00000544363 TOPORSQ9NS56 1045 aaPredicted RBP33.01■■■□□ 2.87
CCM2-219ENST00000544363 ARHGAP6O43182 974 aa33■■■□□ 2.87
CCM2-219ENST00000544363 WNT7BP56706 349 aa33■■■□□ 2.87
CCM2-219ENST00000544363 MRPS6P82932 125 aaKnown RBP33■■■□□ 2.87
CCM2-219ENST00000544363 NCBP1Q09161 790 aaKnown RBP33■■■□□ 2.87
CCM2-219ENST00000544363 PTGISQ16647 500 aa33■■■□□ 2.87
CCM2-219ENST00000544363 EPC2Q52LR7 807 aa33■■■□□ 2.87
CCM2-219ENST00000544363 THNSL1Q8IYQ7 743 aa33■■■□□ 2.87
CCM2-219ENST00000544363 LMO3Q8TAP4 145 aa33■■■□□ 2.87
CCM2-219ENST00000544363 CELF4Q9BZC1 486 aaKnown RBP33■■■□□ 2.87
CCM2-219ENST00000544363 NLRC4Q9NPP4 1024 aa33■■■□□ 2.87
CCM2-219ENST00000544363 FBXL5Q9UKA1 691 aa33■■■□□ 2.87
CCM2-219ENST00000544363 UCHL3P15374 230 aa32.99■■■□□ 2.87
CCM2-219ENST00000544363 TMEM40Q8WWA1 233 aa32.99■■■□□ 2.87
CCM2-219ENST00000544363 KCNJ6P48051 423 aa32.99■■■□□ 2.87
CCM2-219ENST00000544363 RRAGAQ7L523 313 aa32.99■■■□□ 2.87
CCM2-219ENST00000544363 PAK6Q9NQU5 681 aaPredicted RBP32.99■■■□□ 2.87
CCM2-219ENST00000544363 COQ4Q9Y3A0 265 aa32.99■■■□□ 2.87
CCM2-219ENST00000544363 M0QZ92 97 aa32.98■■■□□ 2.87
CCM2-219ENST00000544363 TNNI1P19237 187 aa32.98■■■□□ 2.87
CCM2-219ENST00000544363 HOXA11P31270 313 aaPredicted RBP32.98■■■□□ 2.87
CCM2-219ENST00000544363 PDXDC1Q6P996 788 aa32.98■■■□□ 2.87
CCM2-219ENST00000544363 SV2AQ7L0J3 742 aa32.98■■■□□ 2.87
CCM2-219ENST00000544363 TMTC1Q8IUR5 882 aa32.98■■■□□ 2.87
CCM2-219ENST00000544363 ZNF516Q92618 1163 aa32.98■■■□□ 2.87
CCM2-219ENST00000544363 WNT8BQ93098 351 aa32.98■■■□□ 2.87
CCM2-219ENST00000544363 CGRRF1Q99675 332 aa32.98■■■□□ 2.87
CCM2-219ENST00000544363 ADPGKQ9BRR6 497 aa32.98■■■□□ 2.87
CCM2-219ENST00000544363 NUCKS1Q9H1E3 243 aaKnown RBP32.98■■■□□ 2.87
CCM2-219ENST00000544363 ZNHIT6Q9NWK9 470 aaKnown RBP32.98■■■□□ 2.87
CCM2-219ENST00000544363 TRPV2Q9Y5S1 764 aa32.98■■■□□ 2.87
CCM2-219ENST00000544363 A0A1W2PQ45 241 aaPredicted RBP32.97■■■□□ 2.87
CCM2-219ENST00000544363 A0A1W2PQY0 241 aa32.97■■■□□ 2.87
CCM2-219ENST00000544363 HNRNPH3P31942 346 aaKnown RBP32.97■■■□□ 2.87
CCM2-219ENST00000544363 SURF1Q15526 300 aa32.97■■■□□ 2.87
CCM2-219ENST00000544363 MEA1Q16626 185 aa32.97■■■□□ 2.87
CCM2-219ENST00000544363 KYAT1Q16773 422 aa32.97■■■□□ 2.87
CCM2-219ENST00000544363 WDR59Q6PJI9 974 aa32.97■■■□□ 2.87
CCM2-219ENST00000544363 CYP26C1Q6V0L0 522 aa32.97■■■□□ 2.87
CCM2-219ENST00000544363 CEP120Q8N960 986 aa32.97■■■□□ 2.87
CCM2-219ENST00000544363 PLAGL2Q9UPG8 496 aa32.97■■■□□ 2.87
CCM2-219ENST00000544363 PHF24Q9UPV7 400 aa32.97■■■□□ 2.87
CCM2-219ENST00000544363 CDY2AQ9Y6F7 541 aa32.97■■■□□ 2.87
CCM2-219ENST00000544363 LRRC53A6NM62 1247 aa32.96■■■□□ 2.87
CCM2-219ENST00000544363 KBTBD13C9JR72 458 aa32.96■■■□□ 2.87
CCM2-219ENST00000544363 AXLP30530 894 aa32.96■■■□□ 2.87
CCM2-219ENST00000544363 MTFR1Q15390 333 aa32.96■■■□□ 2.87
CCM2-219ENST00000544363 C15orf39Q6ZRI6 1047 aa32.96■■■□□ 2.87
CCM2-219ENST00000544363 DAAM1Q9Y4D1 1078 aa32.96■■■□□ 2.87
CCM2-219ENST00000544363 FHOD1Q9Y613 1164 aa32.96■■■□□ 2.87
CCM2-219ENST00000544363 CLTAP09496 248 aa32.95■■■□□ 2.87
CCM2-219ENST00000544363 OSTNP61366 133 aa32.95■■■□□ 2.87
CCM2-219ENST00000544363 POU5F1Q01860 360 aaKnown RBP32.95■■■□□ 2.87
CCM2-219ENST00000544363 PTK7Q13308 1070 aa32.95■■■□□ 2.86
CCM2-219ENST00000544363 ENOX2Q16206 610 aaKnown RBP32.95■■■□□ 2.86
CCM2-219ENST00000544363 DCAF4L1Q3SXM0 396 aa32.95■■■□□ 2.86
CCM2-219ENST00000544363 LMBRD2Q68DH5 695 aaPredicted RBP32.95■■■□□ 2.86
CCM2-219ENST00000544363 NOTUMQ6P988 496 aa32.95■■■□□ 2.86
CCM2-219ENST00000544363 APBB1IPQ7Z5R6 666 aaPredicted RBP32.95■■■□□ 2.86
CCM2-219ENST00000544363 SLC43A3Q8NBI5 491 aa32.95■■■□□ 2.86
CCM2-219ENST00000544363 FBXL13Q8NEE6 735 aa32.95■■■□□ 2.86
CCM2-219ENST00000544363 RPF1Q9H9Y2 349 aaKnown RBP32.95■■■□□ 2.86
CCM2-219ENST00000544363 STARD7Q9NQZ5 370 aa32.95■■■□□ 2.86
CCM2-219ENST00000544363 APEX2Q9UBZ4 518 aa32.95■■■□□ 2.86
CCM2-219ENST00000544363 SOWAHDA6NJG2 315 aa32.94■■■□□ 2.86
CCM2-219ENST00000544363 C4BPAP04003 597 aaKnown RBP32.94■■■□□ 2.86
CCM2-219ENST00000544363 STAG3L1P0CL83 205 aa32.94■■■□□ 2.86
CCM2-219ENST00000544363 ZACNQ401N2 412 aa32.94■■■□□ 2.86
CCM2-219ENST00000544363 SYN2Q92777 582 aaPredicted RBP32.94■■■□□ 2.86
CCM2-219ENST00000544363 TRMT13Q9NUP7 481 aaKnown RBP32.94■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms