RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 ZNF792Q3KQV3 632 aa15.29■□□□□ 0.04
LDB3-207ENST00000542786 CCDC181Q5TID7 509 aa15.29■□□□□ 0.04
LDB3-207ENST00000542786 SLFN12LQ6IEE8 588 aa15.29■□□□□ 0.04
LDB3-207ENST00000542786 SLC47A2Q86VL8 602 aa15.29■□□□□ 0.04
LDB3-207ENST00000542786 RPUSD2Q8IZ73 545 aaKnown RBP15.29■□□□□ 0.04
LDB3-207ENST00000542786 ELMO3Q96BJ8 720 aa15.29■□□□□ 0.04
LDB3-207ENST00000542786 SLC10A4Q96EP9 437 aa15.29■□□□□ 0.04
LDB3-207ENST00000542786 THAP2Q9H0W7 228 aa15.29■□□□□ 0.04
LDB3-207ENST00000542786 ACP6Q9NPH0 428 aa15.29■□□□□ 0.04
LDB3-207ENST00000542786 PDGFCQ9NRA1 345 aa15.29■□□□□ 0.04
LDB3-207ENST00000542786 DMGDHQ9UI17 866 aaKnown RBP15.29■□□□□ 0.04
LDB3-207ENST00000542786 DIS3Q9Y2L1 958 aaKnown RBP15.29■□□□□ 0.04
LDB3-207ENST00000542786 GRIN3BO60391 1043 aa15.28■□□□□ 0.04
LDB3-207ENST00000542786 MSCO60682 206 aa15.28■□□□□ 0.04
LDB3-207ENST00000542786 PAFAH1B1P43034 410 aa15.28■□□□□ 0.04
LDB3-207ENST00000542786 ACOT2P49753 483 aa15.28■□□□□ 0.04
LDB3-207ENST00000542786 IER5Q5VY09 327 aa15.28■□□□□ 0.04
LDB3-207ENST00000542786 TDRD10Q5VZ19 366 aaKnown RBP15.28■□□□□ 0.04
LDB3-207ENST00000542786 MAMDC4Q6UXC1 1216 aa15.28■□□□□ 0.04
LDB3-207ENST00000542786 ZPBP2Q6X784 338 aa15.28■□□□□ 0.04
LDB3-207ENST00000542786 CCNI2Q6ZMN8 369 aaPredicted RBP15.28■□□□□ 0.04
LDB3-207ENST00000542786 PNMA8AQ86V59 439 aaPredicted RBP15.28■□□□□ 0.04
LDB3-207ENST00000542786 METTL13Q8N6R0 699 aa15.28■□□□□ 0.04
LDB3-207ENST00000542786 USP38Q8NB14 1042 aa15.28■□□□□ 0.04
LDB3-207ENST00000542786 CTNNBL1Q8WYA6 563 aaPredicted RBP15.28■□□□□ 0.04
LDB3-207ENST00000542786 DHX38Q92620 1227 aaKnown RBP15.28■□□□□ 0.04
LDB3-207ENST00000542786 PBKQ96KB5 322 aa15.28■□□□□ 0.04
LDB3-207ENST00000542786 AZI2Q9H6S1 392 aa15.28■□□□□ 0.04
LDB3-207ENST00000542786 PDE11AQ9HCR9 933 aa15.28■□□□□ 0.04
LDB3-207ENST00000542786 GAS2O43903 313 aaKnown RBP15.27■□□□□ 0.04
LDB3-207ENST00000542786 ZMYND10O75800 440 aa15.27■□□□□ 0.04
LDB3-207ENST00000542786 MTA2O94776 668 aa15.27■□□□□ 0.04
LDB3-207ENST00000542786 GZMAP12544 262 aa15.27■□□□□ 0.04
LDB3-207ENST00000542786 MCM3P25205 808 aa15.27■□□□□ 0.04
LDB3-207ENST00000542786 ARHGAP1Q07960 439 aa15.27■□□□□ 0.04
LDB3-207ENST00000542786 LAMTOR4Q0VGL1 99 aa15.27■□□□□ 0.04
LDB3-207ENST00000542786 ENOSF1Q7L5Y1 443 aa15.27■□□□□ 0.04
LDB3-207ENST00000542786 HDXQ7Z353 690 aa15.27■□□□□ 0.04
LDB3-207ENST00000542786 RASGEF1CQ8N431 466 aa15.27■□□□□ 0.04
LDB3-207ENST00000542786 LMBR1Q8WVP7 490 aa15.27■□□□□ 0.04
LDB3-207ENST00000542786 SPATA33Q96N06 139 aa15.27■□□□□ 0.04
LDB3-207ENST00000542786 PI4K2AQ9BTU6 479 aa15.27■□□□□ 0.04
LDB3-207ENST00000542786 KATNBL1Q9H079 304 aa15.27■□□□□ 0.04
LDB3-207ENST00000542786 MORF4L1Q9UBU8 362 aa15.27■□□□□ 0.04
LDB3-207ENST00000542786 PNMA3Q9UL41 463 aa15.27■□□□□ 0.04
LDB3-207ENST00000542786 PLXNB2O15031 1838 aa15.27■□□□□ 0.03
LDB3-207ENST00000542786 RBM47A0AV96 593 aaKnown RBP15.27■□□□□ 0.03
LDB3-207ENST00000542786 ASB14A6NK59 587 aa15.27■□□□□ 0.03
LDB3-207ENST00000542786 BTBD19C9JJ37 291 aa15.27■□□□□ 0.03
LDB3-207ENST00000542786 DDX3YO15523 660 aaKnown RBP15.27■□□□□ 0.03
LDB3-207ENST00000542786 RTN2O75298 545 aa15.27■□□□□ 0.03
LDB3-207ENST00000542786 HLA-DRAP01903 254 aa15.27■□□□□ 0.03
LDB3-207ENST00000542786 FTLP02792 175 aaPredicted RBP15.27■□□□□ 0.03
LDB3-207ENST00000542786 CYP11B1P15538 503 aa15.27■□□□□ 0.03
LDB3-207ENST00000542786 ABCB4P21439 1286 aa15.27■□□□□ 0.03
LDB3-207ENST00000542786 MARK3P27448 753 aa15.27■□□□□ 0.03
LDB3-207ENST00000542786 TNFRSF8P28908 595 aa15.27■□□□□ 0.03
LDB3-207ENST00000542786 DNA2P51530 1060 aa15.27■□□□□ 0.03
LDB3-207ENST00000542786 LMBRD2Q68DH5 695 aaPredicted RBP15.27■□□□□ 0.03
LDB3-207ENST00000542786 TAPT1Q6NXT6 567 aa15.27■□□□□ 0.03
LDB3-207ENST00000542786 ARMCX2Q7L311 632 aa15.27■□□□□ 0.03
LDB3-207ENST00000542786 PEX26Q7Z412 305 aa15.27■□□□□ 0.03
LDB3-207ENST00000542786 DHX37Q8IY37 1157 aaKnown RBP15.27■□□□□ 0.03
LDB3-207ENST00000542786 SYCE1Q8N0S2 351 aa15.27■□□□□ 0.03
LDB3-207ENST00000542786 GPRC5AQ8NFJ5 357 aa15.27■□□□□ 0.03
LDB3-207ENST00000542786 ACTRT1Q8TDG2 376 aa15.27■□□□□ 0.03
LDB3-207ENST00000542786 AENQ8WTP8 325 aaKnown RBP15.27■□□□□ 0.03
LDB3-207ENST00000542786 SCFD2Q8WU76 684 aa15.27■□□□□ 0.03
LDB3-207ENST00000542786 BRI3BPQ8WY22 251 aa15.27■□□□□ 0.03
LDB3-207ENST00000542786 CGRRF1Q99675 332 aa15.27■□□□□ 0.03
LDB3-207ENST00000542786 MSTO1Q9BUK6 570 aa15.27■□□□□ 0.03
LDB3-207ENST00000542786 KCNK3O14649 394 aa15.26■□□□□ 0.03
LDB3-207ENST00000542786 MMEP08473 750 aa15.26■□□□□ 0.03
LDB3-207ENST00000542786 TXNP10599 105 aaKnown RBP15.26■□□□□ 0.03
LDB3-207ENST00000542786 CETPP11597 493 aa15.26■□□□□ 0.03
LDB3-207ENST00000542786 SLC26A2P50443 739 aa15.26■□□□□ 0.03
LDB3-207ENST00000542786 EFNA5P52803 228 aa15.26■□□□□ 0.03
LDB3-207ENST00000542786 CDR2Q01850 454 aa15.26■□□□□ 0.03
LDB3-207ENST00000542786 CASP8Q14790 479 aa15.26■□□□□ 0.03
LDB3-207ENST00000542786 GLE1Q53GS7 698 aaKnown RBP15.26■□□□□ 0.03
LDB3-207ENST00000542786 TAF4BQ92750 862 aa15.26■□□□□ 0.03
LDB3-207ENST00000542786 GLG1Q92896 1179 aa15.26■□□□□ 0.03
LDB3-207ENST00000542786 RBAKQ9NYW8 714 aaPredicted RBP15.26■□□□□ 0.03
LDB3-207ENST00000542786 PLXNA1Q9UIW2 1896 aa15.26■□□□□ 0.03
LDB3-207ENST00000542786 BHMG1C9JSJ3 638 aaPredicted RBP15.25■□□□□ 0.03
LDB3-207ENST00000542786 H3BQF6 201 aa15.25■□□□□ 0.03
LDB3-207ENST00000542786 PDHXO00330 501 aa15.25■□□□□ 0.03
LDB3-207ENST00000542786 LDHAP00338 332 aaKnown RBP15.25■□□□□ 0.03
LDB3-207ENST00000542786 ACO1P21399 889 aaKnown RBP15.25■□□□□ 0.03
LDB3-207ENST00000542786 USP8P40818 1118 aa15.25■□□□□ 0.03
LDB3-207ENST00000542786 TTLL4Q14679 1199 aa15.25■□□□□ 0.03
LDB3-207ENST00000542786 DCAF12L1Q5VU92 463 aa15.25■□□□□ 0.03
LDB3-207ENST00000542786 MAP1SQ66K74 1059 aaPredicted RBP15.25■□□□□ 0.03
LDB3-207ENST00000542786 C11orf63Q6NUN7 778 aa15.25■□□□□ 0.03
LDB3-207ENST00000542786 DAAM2Q86T65 1068 aa15.25■□□□□ 0.03
LDB3-207ENST00000542786 BRSK2Q8IWQ3 736 aa15.25■□□□□ 0.03
LDB3-207ENST00000542786 RHOT2Q8IXI1 618 aa15.25■□□□□ 0.03
LDB3-207ENST00000542786 TCP11Q8WWU5 503 aa15.25■□□□□ 0.03
LDB3-207ENST00000542786 ACO2Q99798 780 aaKnown RBP15.25■□□□□ 0.03
LDB3-207ENST00000542786 APOBEC3GQ9HC16 384 aaKnown RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms