RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 VTA1Q9NP79 307 aa18.64■□□□□ 0.58
TMEM50B-210ENST00000542230 RBAKQ9NYW8 714 aaPredicted RBP18.64■□□□□ 0.58
TMEM50B-210ENST00000542230 SIP14410 1827 aa18.64■□□□□ 0.57
TMEM50B-210ENST00000542230 PMM2O15305 246 aa18.64■□□□□ 0.57
TMEM50B-210ENST00000542230 FAM189A1O60320 539 aa18.64■□□□□ 0.57
TMEM50B-210ENST00000542230 VNN1O95497 513 aa18.64■□□□□ 0.57
TMEM50B-210ENST00000542230 C22orf31O95567 290 aa18.64■□□□□ 0.57
TMEM50B-210ENST00000542230 GH1P01241 217 aa18.64■□□□□ 0.57
TMEM50B-210ENST00000542230 LAMC2Q13753 1193 aa18.64■□□□□ 0.57
TMEM50B-210ENST00000542230 C15orf39Q6ZRI6 1047 aa18.64■□□□□ 0.57
TMEM50B-210ENST00000542230 NOP9Q86U38 636 aaKnown RBP18.64■□□□□ 0.57
TMEM50B-210ENST00000542230 ABRAQ8N0Z2 381 aa18.64■□□□□ 0.57
TMEM50B-210ENST00000542230 RNF10Q8N5U6 811 aaKnown RBP18.64■□□□□ 0.57
TMEM50B-210ENST00000542230 MS4A14Q96JA4 679 aa18.64■□□□□ 0.57
TMEM50B-210ENST00000542230 ALS2CR12Q96Q35 445 aa18.64■□□□□ 0.57
TMEM50B-210ENST00000542230 OSBPL9Q96SU4 736 aa18.64■□□□□ 0.57
TMEM50B-210ENST00000542230 PCDHB18PQ96TA0 734 aa18.64■□□□□ 0.57
TMEM50B-210ENST00000542230 HINFPQ9BQA5 517 aa18.64■□□□□ 0.57
TMEM50B-210ENST00000542230 TINF2Q9BSI4 451 aa18.64■□□□□ 0.57
TMEM50B-210ENST00000542230 C16orf70Q9BSU1 422 aa18.64■□□□□ 0.57
TMEM50B-210ENST00000542230 OSGEPQ9NPF4 335 aa18.64■□□□□ 0.57
TMEM50B-210ENST00000542230 ERAP1Q9NZ08 941 aa18.64■□□□□ 0.57
TMEM50B-210ENST00000542230 FLRT1Q9NZU1 646 aa18.64■□□□□ 0.57
TMEM50B-210ENST00000542230 SEC31AO94979 1220 aaKnown RBP18.63■□□□□ 0.57
TMEM50B-210ENST00000542230 CHRNB2P17787 502 aa18.63■□□□□ 0.57
TMEM50B-210ENST00000542230 NOP2P46087 812 aaKnown RBP18.63■□□□□ 0.57
TMEM50B-210ENST00000542230 MRPS25P82663 173 aaKnown RBP18.63■□□□□ 0.57
TMEM50B-210ENST00000542230 PSMD6Q15008 389 aa18.63■□□□□ 0.57
TMEM50B-210ENST00000542230 CDCA2Q69YH5 1023 aaPredicted RBP18.63■□□□□ 0.57
TMEM50B-210ENST00000542230 RASAL3Q86YV0 1011 aa18.63■□□□□ 0.57
TMEM50B-210ENST00000542230 RABGGTAQ92696 567 aa18.63■□□□□ 0.57
TMEM50B-210ENST00000542230 ARHGEF26Q96DR7 871 aa18.63■□□□□ 0.57
TMEM50B-210ENST00000542230 AGPAT1Q99943 283 aa18.63■□□□□ 0.57
TMEM50B-210ENST00000542230 TCHPQ9BT92 498 aa18.63■□□□□ 0.57
TMEM50B-210ENST00000542230 RBM47A0AV96 593 aaKnown RBP18.63■□□□□ 0.57
TMEM50B-210ENST00000542230 CLDN3O15551 220 aa18.63■□□□□ 0.57
TMEM50B-210ENST00000542230 HBP1O60381 514 aa18.63■□□□□ 0.57
TMEM50B-210ENST00000542230 C4BPAP04003 597 aaKnown RBP18.63■□□□□ 0.57
TMEM50B-210ENST00000542230 PRKCBP05771 671 aa18.63■□□□□ 0.57
TMEM50B-210ENST00000542230 H2AFZP0C0S5 128 aa18.63■□□□□ 0.57
TMEM50B-210ENST00000542230 HSP90AA2PQ14568 343 aaPredicted RBP18.63■□□□□ 0.57
TMEM50B-210ENST00000542230 H2AFVQ71UI9 128 aa18.63■□□□□ 0.57
TMEM50B-210ENST00000542230 FAM71AQ8IYT1 594 aa18.63■□□□□ 0.57
TMEM50B-210ENST00000542230 CEP120Q8N960 986 aa18.63■□□□□ 0.57
TMEM50B-210ENST00000542230 FNBP1Q96RU3 617 aa18.63■□□□□ 0.57
TMEM50B-210ENST00000542230 ACO2Q99798 780 aaKnown RBP18.63■□□□□ 0.57
TMEM50B-210ENST00000542230 PCDHGC5Q9Y5F6 944 aa18.63■□□□□ 0.57
TMEM50B-210ENST00000542230 CNTNAP2Q9UHC6 1331 aa18.63■□□□□ 0.57
TMEM50B-210ENST00000542230 ABLIM1O14639 778 aa18.62■□□□□ 0.57
TMEM50B-210ENST00000542230 TNFAIP3P21580 790 aa18.62■□□□□ 0.57
TMEM50B-210ENST00000542230 OSTNP61366 133 aa18.62■□□□□ 0.57
TMEM50B-210ENST00000542230 CLDN10P78369 228 aa18.62■□□□□ 0.57
TMEM50B-210ENST00000542230 ACVR2BQ13705 512 aa18.62■□□□□ 0.57
TMEM50B-210ENST00000542230 TUBB2AQ13885 445 aa18.62■□□□□ 0.57
TMEM50B-210ENST00000542230 VPS36Q86VN1 386 aa18.62■□□□□ 0.57
TMEM50B-210ENST00000542230 RPUSD2Q8IZ73 545 aaKnown RBP18.62■□□□□ 0.57
TMEM50B-210ENST00000542230 PPTC7Q8NI37 304 aa18.62■□□□□ 0.57
TMEM50B-210ENST00000542230 SHC3Q92529 594 aa18.62■□□□□ 0.57
TMEM50B-210ENST00000542230 KCNN1Q92952 543 aa18.62■□□□□ 0.57
TMEM50B-210ENST00000542230 TUBB2BQ9BVA1 445 aa18.62■□□□□ 0.57
TMEM50B-210ENST00000542230 LUC7LQ9NQ29 371 aaKnown RBP18.62■□□□□ 0.57
TMEM50B-210ENST00000542230 LOC102724159A0A0B4J2E5 919 aa18.62■□□□□ 0.57
TMEM50B-210ENST00000542230 SPDYE4A6NLX3 237 aa18.62■□□□□ 0.57
TMEM50B-210ENST00000542230 INO80B-WBP1J3KQ70 363 aa18.62■□□□□ 0.57
TMEM50B-210ENST00000542230 VTNP04004 478 aa18.62■□□□□ 0.57
TMEM50B-210ENST00000542230 MXD4Q14582 209 aaPredicted RBP18.62■□□□□ 0.57
TMEM50B-210ENST00000542230 PWP2Q15269 919 aaKnown RBP18.62■□□□□ 0.57
TMEM50B-210ENST00000542230 CCL14Q16627 93 aa18.62■□□□□ 0.57
TMEM50B-210ENST00000542230 ZACNQ401N2 412 aa18.62■□□□□ 0.57
TMEM50B-210ENST00000542230 EEF1DP3Q658K8 133 aa18.62■□□□□ 0.57
TMEM50B-210ENST00000542230 GPR161Q8N6U8 529 aaKnown RBP18.62■□□□□ 0.57
TMEM50B-210ENST00000542230 EPS8L1Q8TE68 723 aa18.62■□□□□ 0.57
TMEM50B-210ENST00000542230 FAM212AQ96EL1 285 aa18.62■□□□□ 0.57
TMEM50B-210ENST00000542230 NT5C1BQ96P26 610 aa18.62■□□□□ 0.57
TMEM50B-210ENST00000542230 INO80BQ9C086 356 aaPredicted RBP18.62■□□□□ 0.57
TMEM50B-210ENST00000542230 THAP2Q9H0W7 228 aa18.62■□□□□ 0.57
TMEM50B-210ENST00000542230 NOCTQ9UK39 431 aaKnown RBP18.62■□□□□ 0.57
TMEM50B-210ENST00000542230 HYOU1Q9Y4L1 999 aa18.62■□□□□ 0.57
TMEM50B-210ENST00000542230 UMODL1Q5DID0 1318 aa18.61■□□□□ 0.57
TMEM50B-210ENST00000542230 HLA-DRAP01903 254 aa18.61■□□□□ 0.57
TMEM50B-210ENST00000542230 C2orf54Q08AI8 447 aa18.61■□□□□ 0.57
TMEM50B-210ENST00000542230 BIRC3Q13489 604 aa18.61■□□□□ 0.57
TMEM50B-210ENST00000542230 TMEM192Q8IY95 271 aa18.61■□□□□ 0.57
TMEM50B-210ENST00000542230 ZIC5Q96T25 663 aa18.61■□□□□ 0.57
TMEM50B-210ENST00000542230 APOBEC3GQ9HC16 384 aaKnown RBP18.61■□□□□ 0.57
TMEM50B-210ENST00000542230 KCNG1Q9UIX4 513 aa18.61■□□□□ 0.57
TMEM50B-210ENST00000542230 MMEP08473 750 aa18.61■□□□□ 0.57
TMEM50B-210ENST00000542230 RFX1P22670 979 aa18.61■□□□□ 0.57
TMEM50B-210ENST00000542230 GTF2H1P32780 548 aa18.61■□□□□ 0.57
TMEM50B-210ENST00000542230 SLC26A2P50443 739 aa18.61■□□□□ 0.57
TMEM50B-210ENST00000542230 RNASE9P60153 205 aaKnown RBP18.61■□□□□ 0.57
TMEM50B-210ENST00000542230 MAPK6Q16659 721 aa18.61■□□□□ 0.57
TMEM50B-210ENST00000542230 SLFN12LQ6IEE8 588 aa18.61■□□□□ 0.57
TMEM50B-210ENST00000542230 ZNF467Q7Z7K2 595 aaPredicted RBP18.61■□□□□ 0.57
TMEM50B-210ENST00000542230 LRRC57Q8N9N7 239 aa18.61■□□□□ 0.57
TMEM50B-210ENST00000542230 CAGE1Q8TC20 777 aa18.61■□□□□ 0.57
TMEM50B-210ENST00000542230 TCP11Q8WWU5 503 aa18.61■□□□□ 0.57
TMEM50B-210ENST00000542230 ZBTB9Q96C00 473 aa18.61■□□□□ 0.57
TMEM50B-210ENST00000542230 MRPL4Q9BYD3 311 aaKnown RBP18.61■□□□□ 0.57
TMEM50B-210ENST00000542230 IFT122Q9HBG6 1241 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms