RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 ANTXR1Q9H6X2 564 aa11.33□□□□□ -0.6
GABRB3-204ENST00000541819 DMAP1Q9NPF5 467 aaPredicted RBP11.33□□□□□ -0.6
GABRB3-204ENST00000541819 GGPS1O95749 300 aa11.33□□□□□ -0.6
GABRB3-204ENST00000541819 S100A5P33763 92 aa11.33□□□□□ -0.6
GABRB3-204ENST00000541819 PSMC5P62195 406 aa11.33□□□□□ -0.6
GABRB3-204ENST00000541819 COASYQ13057 564 aa11.33□□□□□ -0.6
GABRB3-204ENST00000541819 PHKG1Q16816 387 aa11.33□□□□□ -0.6
GABRB3-204ENST00000541819 RCSD1Q6JBY9 416 aa11.33□□□□□ -0.6
GABRB3-204ENST00000541819 KCNV1Q6PIU1 500 aa11.33□□□□□ -0.6
GABRB3-204ENST00000541819 KIAA2013Q8IYS2 634 aa11.33□□□□□ -0.6
GABRB3-204ENST00000541819 GRID2IPA4D2P6 1211 aa11.33□□□□□ -0.6
GABRB3-204ENST00000541819 TADA2AO75478 443 aa11.33□□□□□ -0.6
GABRB3-204ENST00000541819 CYP2E1P05181 493 aaPredicted RBP11.33□□□□□ -0.6
GABRB3-204ENST00000541819 LIFRP42702 1097 aa11.33□□□□□ -0.6
GABRB3-204ENST00000541819 CDH6P55285 790 aa11.33□□□□□ -0.6
GABRB3-204ENST00000541819 CCDC15Q0P6D6 951 aa11.33□□□□□ -0.6
GABRB3-204ENST00000541819 ENAHQ8N8S7 591 aaPredicted RBP11.33□□□□□ -0.6
GABRB3-204ENST00000541819 CEP95Q96GE4 821 aa11.33□□□□□ -0.6
GABRB3-204ENST00000541819 HES6Q96HZ4 224 aa11.33□□□□□ -0.6
GABRB3-204ENST00000541819 MUC3BQ9H195 1237 aa11.33□□□□□ -0.6
GABRB3-204ENST00000541819 SMARCAD1Q9H4L7 1026 aa11.33□□□□□ -0.6
GABRB3-204ENST00000541819 RBAKQ9NYW8 714 aaPredicted RBP11.33□□□□□ -0.6
GABRB3-204ENST00000541819 DTNAQ9Y4J8 743 aa11.33□□□□□ -0.6
GABRB3-204ENST00000541819 C16orf96A6NNT2 1141 aa11.33□□□□□ -0.6
GABRB3-204ENST00000541819 MYO1GB0I1T2 1018 aa11.33□□□□□ -0.6
GABRB3-204ENST00000541819 GPSM2P81274 684 aa11.33□□□□□ -0.6
GABRB3-204ENST00000541819 TP53BP2Q13625 1128 aa11.33□□□□□ -0.6
GABRB3-204ENST00000541819 SARM1Q6SZW1 724 aa11.33□□□□□ -0.6
GABRB3-204ENST00000541819 ARHGAP18Q8N392 663 aa11.33□□□□□ -0.6
GABRB3-204ENST00000541819 STKLD1Q8NE28 680 aa11.33□□□□□ -0.6
GABRB3-204ENST00000541819 ECT2Q9H8V3 914 aa11.33□□□□□ -0.6
GABRB3-204ENST00000541819 CACNA2D2Q9NY47 1150 aa11.33□□□□□ -0.6
GABRB3-204ENST00000541819 PLEKHA8P1O95397 391 aa11.33□□□□□ -0.6
GABRB3-204ENST00000541819 SH3BP1Q9Y3L3 701 aa11.33□□□□□ -0.6
GABRB3-204ENST00000541819 PKP3Q9Y446 797 aa11.33□□□□□ -0.6
GABRB3-204ENST00000541819 C3orf70A6NLC5 250 aaPredicted RBP11.32□□□□□ -0.6
GABRB3-204ENST00000541819 GOLGA8RI6L899 631 aa11.32□□□□□ -0.6
GABRB3-204ENST00000541819 KCNQ4P56696 695 aa11.32□□□□□ -0.6
GABRB3-204ENST00000541819 CDC42EP1Q00587 391 aa11.32□□□□□ -0.6
GABRB3-204ENST00000541819 NBPF9Q3BBW0 867 aa11.32□□□□□ -0.6
GABRB3-204ENST00000541819 ATPAF2Q8N5M1 289 aa11.32□□□□□ -0.6
GABRB3-204ENST00000541819 ARL8AQ96BM9 186 aa11.32□□□□□ -0.6
GABRB3-204ENST00000541819 ATXN7L3BQ96GX2 97 aa11.32□□□□□ -0.6
GABRB3-204ENST00000541819 ELMO2Q96JJ3 720 aa11.32□□□□□ -0.6
GABRB3-204ENST00000541819 RNF181Q9P0P0 153 aa11.32□□□□□ -0.6
GABRB3-204ENST00000541819 SLC30A1Q9Y6M5 507 aa11.32□□□□□ -0.6
GABRB3-204ENST00000541819 ZNF608Q9ULD9 1512 aaPredicted RBP11.32□□□□□ -0.6
GABRB3-204ENST00000541819 H0YC42 278 aa11.32□□□□□ -0.6
GABRB3-204ENST00000541819 PDHA1P08559 390 aa11.32□□□□□ -0.6
GABRB3-204ENST00000541819 MMP10P09238 476 aa11.32□□□□□ -0.6
GABRB3-204ENST00000541819 ANGPT1Q15389 498 aa11.32□□□□□ -0.6
GABRB3-204ENST00000541819 SMAD1Q15797 465 aaKnown RBP11.32□□□□□ -0.6
GABRB3-204ENST00000541819 CCDC142Q17RM4 750 aa11.32□□□□□ -0.6
GABRB3-204ENST00000541819 KNOP1Q1ED39 458 aaKnown RBP11.32□□□□□ -0.6
GABRB3-204ENST00000541819 CNPY4Q8N129 248 aa11.32□□□□□ -0.6
GABRB3-204ENST00000541819 OTUD5Q96G74 571 aa11.32□□□□□ -0.6
GABRB3-204ENST00000541819 KATNAL1Q9BW62 490 aa11.32□□□□□ -0.6
GABRB3-204ENST00000541819 WWP1Q9H0M0 922 aa11.32□□□□□ -0.6
GABRB3-204ENST00000541819 ZFATQ9P243 1243 aa11.32□□□□□ -0.6
GABRB3-204ENST00000541819 PIN4Q9Y237 131 aaKnown RBP11.32□□□□□ -0.6
GABRB3-204ENST00000541819 ZNF335Q9H4Z2 1342 aaPredicted RBP11.32□□□□□ -0.6
GABRB3-204ENST00000541819 FAM187AA6NFU0 413 aa11.32□□□□□ -0.6
GABRB3-204ENST00000541819 NDUFS3O75489 264 aa11.32□□□□□ -0.6
GABRB3-204ENST00000541819 SEC24DO94855 1032 aaPredicted RBP11.32□□□□□ -0.6
GABRB3-204ENST00000541819 ACTR2P61160 394 aa11.32□□□□□ -0.6
GABRB3-204ENST00000541819 BTNL9Q6UXG8 535 aa11.32□□□□□ -0.6
GABRB3-204ENST00000541819 FAM162AQ96A26 154 aa11.32□□□□□ -0.6
GABRB3-204ENST00000541819 GPR101Q96P66 508 aaPredicted RBP11.32□□□□□ -0.6
GABRB3-204ENST00000541819 PPP1R2P1Q96PQ5 205 aa11.32□□□□□ -0.6
GABRB3-204ENST00000541819 ARHGEF38Q9NXL2 777 aa11.32□□□□□ -0.6
GABRB3-204ENST00000541819 RCOR1Q9UKL0 485 aa11.32□□□□□ -0.6
GABRB3-204ENST00000541819 ALDH1A2O94788 518 aa11.32□□□□□ -0.6
GABRB3-204ENST00000541819 SASH1O94885 1247 aa11.32□□□□□ -0.6
GABRB3-204ENST00000541819 SERPINB4P48594 390 aa11.32□□□□□ -0.6
GABRB3-204ENST00000541819 GFPT1Q06210 699 aaPredicted RBP11.32□□□□□ -0.6
GABRB3-204ENST00000541819 ORC2Q13416 577 aaPredicted RBP11.32□□□□□ -0.6
GABRB3-204ENST00000541819 RESP18Q5W5W9 173 aa11.32□□□□□ -0.6
GABRB3-204ENST00000541819 TMED8Q6PL24 325 aaPredicted RBP11.32□□□□□ -0.6
GABRB3-204ENST00000541819 KDELC2Q7Z4H8 507 aa11.32□□□□□ -0.6
GABRB3-204ENST00000541819 AGR3Q8TD06 166 aa11.32□□□□□ -0.6
GABRB3-204ENST00000541819 TMEM245Q9H330 911 aa11.32□□□□□ -0.6
GABRB3-204ENST00000541819 PAPOLBQ9NRJ5 636 aaKnown RBP11.32□□□□□ -0.6
GABRB3-204ENST00000541819 POTEMA6NI47 508 aa11.31□□□□□ -0.6
GABRB3-204ENST00000541819 TNPO2O14787 897 aaKnown RBP11.31□□□□□ -0.6
GABRB3-204ENST00000541819 SOAT1P35610 550 aa11.31□□□□□ -0.6
GABRB3-204ENST00000541819 MAGOHP61326 146 aaKnown RBP11.31□□□□□ -0.6
GABRB3-204ENST00000541819 PPP2R2AP63151 447 aa11.31□□□□□ -0.6
GABRB3-204ENST00000541819 KCNH2Q12809 1159 aa11.31□□□□□ -0.6
GABRB3-204ENST00000541819 MTFR1Q15390 333 aa11.31□□□□□ -0.6
GABRB3-204ENST00000541819 IZUMO3Q5VZ72 239 aa11.31□□□□□ -0.6
GABRB3-204ENST00000541819 TRIM69Q86WT6 500 aa11.31□□□□□ -0.6
GABRB3-204ENST00000541819 HORMAD1Q86X24 394 aa11.31□□□□□ -0.6
GABRB3-204ENST00000541819 KRT78Q8N1N4 520 aa11.31□□□□□ -0.6
GABRB3-204ENST00000541819 PIH1D3Q9NQM4 214 aaKnown RBP11.31□□□□□ -0.6
GABRB3-204ENST00000541819 SHANK2Q9UPX8 1470 aa11.31□□□□□ -0.6
GABRB3-204ENST00000541819 SRP72O76094 671 aaKnown RBP11.31□□□□□ -0.6
GABRB3-204ENST00000541819 IRF1P10914 325 aa11.31□□□□□ -0.6
GABRB3-204ENST00000541819 BRAFP15056 766 aa11.31□□□□□ -0.6
GABRB3-204ENST00000541819 EFNA5P52803 228 aa11.31□□□□□ -0.6
GABRB3-204ENST00000541819 HIC1Q14526 733 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms