RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 ANKRD20A1Q5TYW2 823 aa5.59□□□□□ -1.52
PROM1-220ENST00000540805 ANKRD20A3Q5VUR7 823 aa5.59□□□□□ -1.52
PROM1-220ENST00000540805 ISLR2Q6UXK2 745 aa5.59□□□□□ -1.52
PROM1-220ENST00000540805 SH3BP5LQ7L8J4 393 aa5.59□□□□□ -1.52
PROM1-220ENST00000540805 SLFN11Q7Z7L1 901 aa5.59□□□□□ -1.52
PROM1-220ENST00000540805 NT5DC3Q86UY8 548 aa5.59□□□□□ -1.52
PROM1-220ENST00000540805 PPP1R14CQ8TAE6 165 aa5.59□□□□□ -1.52
PROM1-220ENST00000540805 RBM41Q96IZ5 413 aaKnown RBP5.59□□□□□ -1.52
PROM1-220ENST00000540805 ZNF668Q96K58 619 aaPredicted RBP5.59□□□□□ -1.52
PROM1-220ENST00000540805 NAP1L3Q99457 506 aaPredicted RBP5.59□□□□□ -1.52
PROM1-220ENST00000540805 ERP44Q9BS26 406 aa5.59□□□□□ -1.52
PROM1-220ENST00000540805 INO80BQ9C086 356 aaPredicted RBP5.59□□□□□ -1.52
PROM1-220ENST00000540805 MMADHCQ9H3L0 296 aaPredicted RBP5.59□□□□□ -1.52
PROM1-220ENST00000540805 KANSL2Q9H9L4 492 aa5.59□□□□□ -1.52
PROM1-220ENST00000540805 MLXIPLQ9NP71 852 aa5.59□□□□□ -1.52
PROM1-220ENST00000540805 CHCHD3Q9NX63 227 aaKnown RBP5.59□□□□□ -1.52
PROM1-220ENST00000540805 DIS3Q9Y2L1 958 aaKnown RBP5.59□□□□□ -1.52
PROM1-220ENST00000540805 CENPFP49454 3210 aa5.59□□□□□ -1.52
PROM1-220ENST00000540805 PARP14Q460N5 1801 aa5.59□□□□□ -1.52
PROM1-220ENST00000540805 POLR2MP0CAP2 368 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 DLATP10515 647 aaKnown RBP5.58□□□□□ -1.52
PROM1-220ENST00000540805 NPR1P16066 1061 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 ANXA13P27216 316 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 ABCD1P33897 745 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 MSH2P43246 934 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 FXR2P51116 673 aaKnown RBP eCLIP5.58□□□□□ -1.52
PROM1-220ENST00000540805 PLTPP55058 493 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 PTENP60484 403 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 IFI35P80217 286 aaPredicted RBP5.58□□□□□ -1.52
PROM1-220ENST00000540805 MXRA7P84157 204 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 KCNH2Q12809 1159 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 PPP2R5CQ13362 524 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 DUPD1Q68J44 220 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 ANO7Q6IWH7 933 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 SIAH1Q8IUQ4 282 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 RNF25Q96BH1 459 aaPredicted RBP5.58□□□□□ -1.52
PROM1-220ENST00000540805 OTUD5Q96G74 571 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 ANKRD27Q96NW4 1050 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 WRNIP1Q96S55 665 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 ZNF341Q9BYN7 854 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 TRIM4Q9C037 500 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 MAF1Q9H063 256 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 FAM49AQ9H0Q0 323 aaPredicted RBP5.58□□□□□ -1.52
PROM1-220ENST00000540805 EPB41L4BQ9H329 900 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 ZDHHC18Q9NUE0 388 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 DNAAF2Q9NVR5 837 aaKnown RBP5.58□□□□□ -1.52
PROM1-220ENST00000540805 ZFATQ9P243 1243 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 MTRF1LQ9UGC7 380 aaKnown RBP5.58□□□□□ -1.52
PROM1-220ENST00000540805 TTC7AQ9ULT0 858 aaPredicted RBP5.58□□□□□ -1.52
PROM1-220ENST00000540805 NUB1Q9Y5A7 615 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 A6NHS1 94 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 POTEMA6NI47 508 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 OAS1P00973 400 aaKnown RBP5.58□□□□□ -1.52
PROM1-220ENST00000540805 ACTN1P12814 892 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 MARK3P27448 753 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 HOXA13P31271 388 aaPredicted RBP5.58□□□□□ -1.52
PROM1-220ENST00000540805 YARSP54577 528 aaKnown RBP5.58□□□□□ -1.52
PROM1-220ENST00000540805 INHBCP55103 352 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 NPEPPSP55786 919 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 OSTNP61366 133 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 CACNB1Q02641 598 aaPredicted RBP5.58□□□□□ -1.52
PROM1-220ENST00000540805 BNIP1Q12981 228 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 DHX34Q14147 1143 aaKnown RBP5.58□□□□□ -1.52
PROM1-220ENST00000540805 SLC29A2Q14542 456 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 LLGL1Q15334 1064 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 CNGA2Q16280 664 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 GALNTL6Q49A17 601 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 KIAA1755Q5JYT7 1200 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 BTNL9Q6UXG8 535 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 ARHGAP22Q7Z5H3 698 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 IRF2BP2Q7Z5L9 587 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.58□□□□□ -1.52
PROM1-220ENST00000540805 TEX9Q8N6V9 391 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 GJA10Q969M2 543 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 MASTLQ96GX5 879 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 HES6Q96HZ4 224 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 PLEKHG4BQ96PX9 1271 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 LZTS2Q9BRK4 669 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 TRIM7Q9C029 511 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 RGL1Q9NZL6 768 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 INTUQ9ULD6 942 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 SUGT1Q9Y2Z0 365 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 SNX24Q9Y343 169 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 SYNJ2BP-COX16A0A087WUM0 186 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 YDJCA8MPS7 323 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 O00370 1275 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 RASGRF2O14827 1237 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 SPOPO43791 374 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 AHCYL1O43865 530 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 LPXNO60711 386 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 WFS1O76024 890 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 GBP1P32455 592 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 PRKCIP41743 596 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 CDK8P49336 464 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 ARPP19P56211 112 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 JAG1P78504 1218 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 KLRC3Q07444 240 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 MKRN4PQ13434 485 aaPredicted RBP5.58□□□□□ -1.52
PROM1-220ENST00000540805 TMEM119Q4V9L6 283 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 BSPRYQ5W0U4 402 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms