RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 SEPT4O43236 478 aa26.6■■□□□ 1.85
TTC3-225ENST00000540756 PRKAR2AP13861 404 aaKnown RBP26.6■■□□□ 1.85
TTC3-225ENST00000540756 FGFR4P22455 802 aa26.6■■□□□ 1.85
TTC3-225ENST00000540756 GJA9P57773 515 aa26.6■■□□□ 1.85
TTC3-225ENST00000540756 MCL1Q07820 350 aa26.6■■□□□ 1.85
TTC3-225ENST00000540756 TDRD12Q587J7 1177 aaKnown RBP26.6■■□□□ 1.85
TTC3-225ENST00000540756 SCARA3Q6AZY7 606 aa26.6■■□□□ 1.85
TTC3-225ENST00000540756 CCDC170Q8IYT3 715 aa26.6■■□□□ 1.85
TTC3-225ENST00000540756 CEP120Q8N960 986 aa26.6■■□□□ 1.85
TTC3-225ENST00000540756 SCLT1Q96NL6 688 aa26.6■■□□□ 1.85
TTC3-225ENST00000540756 NUCKS1Q9H1E3 243 aaKnown RBP26.6■■□□□ 1.85
TTC3-225ENST00000540756 TRIM10Q9UDY6 481 aa26.6■■□□□ 1.85
TTC3-225ENST00000540756 SRRDQ9UH36 339 aa26.6■■□□□ 1.85
TTC3-225ENST00000540756 CNTNAP2Q9UHC6 1331 aa26.6■■□□□ 1.85
TTC3-225ENST00000540756 MBLAC1A4D2B0 266 aaPredicted RBP26.6■■□□□ 1.85
TTC3-225ENST00000540756 KIAA0391O15091 583 aaKnown RBP26.6■■□□□ 1.85
TTC3-225ENST00000540756 MAP2K2P36507 400 aa26.6■■□□□ 1.85
TTC3-225ENST00000540756 KIF11P52732 1056 aa26.6■■□□□ 1.85
TTC3-225ENST00000540756 OSTNP61366 133 aa26.6■■□□□ 1.85
TTC3-225ENST00000540756 POU5F1BQ06416 359 aa26.6■■□□□ 1.85
TTC3-225ENST00000540756 TMEM132AQ24JP5 1023 aa26.6■■□□□ 1.85
TTC3-225ENST00000540756 ASTE1Q2TB18 679 aaPredicted RBP26.6■■□□□ 1.85
TTC3-225ENST00000540756 CXCL17Q6UXB2 119 aa26.6■■□□□ 1.85
TTC3-225ENST00000540756 SYT10Q6XYQ8 523 aa26.6■■□□□ 1.85
TTC3-225ENST00000540756 KAT5Q92993 513 aa26.6■■□□□ 1.85
TTC3-225ENST00000540756 RCCD1A6NED2 376 aa26.59■■□□□ 1.85
TTC3-225ENST00000540756 LDHAP00338 332 aaKnown RBP26.59■■□□□ 1.85
TTC3-225ENST00000540756 SERPING1P05155 500 aa26.59■■□□□ 1.85
TTC3-225ENST00000540756 CYP2C9P11712 490 aa26.59■■□□□ 1.85
TTC3-225ENST00000540756 TNNI1P19237 187 aa26.59■■□□□ 1.85
TTC3-225ENST00000540756 CYLC1P35663 651 aaPredicted RBP26.59■■□□□ 1.85
TTC3-225ENST00000540756 ARHGAP25P42331 645 aa26.59■■□□□ 1.85
TTC3-225ENST00000540756 CETN1Q12798 172 aa26.59■■□□□ 1.85
TTC3-225ENST00000540756 DRAP1Q14919 205 aaPredicted RBP26.59■■□□□ 1.85
TTC3-225ENST00000540756 ASIC2Q16515 512 aa26.59■■□□□ 1.85
TTC3-225ENST00000540756 ARHGAP44Q17R89 818 aa26.59■■□□□ 1.85
TTC3-225ENST00000540756 MPZL3Q6UWV2 235 aa26.59■■□□□ 1.85
TTC3-225ENST00000540756 IFNLR1Q8IU57 520 aaPredicted RBP26.59■■□□□ 1.85
TTC3-225ENST00000540756 UBE2TQ9NPD8 197 aaPredicted RBP26.59■■□□□ 1.85
TTC3-225ENST00000540756 EIF3CLB5ME19 914 aaKnown RBP26.58■■□□□ 1.85
TTC3-225ENST00000540756 PMM2O15305 246 aa26.58■■□□□ 1.85
TTC3-225ENST00000540756 CLDN10P78369 228 aa26.58■■□□□ 1.85
TTC3-225ENST00000540756 GFPT1Q06210 699 aaPredicted RBP26.58■■□□□ 1.85
TTC3-225ENST00000540756 ZNF568Q3ZCX4 644 aa26.58■■□□□ 1.85
TTC3-225ENST00000540756 SLC9C1Q4G0N8 1177 aa26.58■■□□□ 1.85
TTC3-225ENST00000540756 TMEM192Q8IY95 271 aa26.58■■□□□ 1.85
TTC3-225ENST00000540756 THNSL1Q8IYQ7 743 aa26.58■■□□□ 1.85
TTC3-225ENST00000540756 FNBP1Q96RU3 617 aa26.58■■□□□ 1.85
TTC3-225ENST00000540756 EIF3CQ99613 913 aaKnown RBP26.58■■□□□ 1.85
TTC3-225ENST00000540756 PI4K2AQ9BTU6 479 aa26.58■■□□□ 1.85
TTC3-225ENST00000540756 ADAMTS10Q9H324 1103 aa26.58■■□□□ 1.85
TTC3-225ENST00000540756 HAUS4Q9H6D7 363 aa26.58■■□□□ 1.85
TTC3-225ENST00000540756 PRMT7Q9NVM4 692 aaPredicted RBP26.58■■□□□ 1.85
TTC3-225ENST00000540756 F8VZ95 297 aa26.58■■□□□ 1.85
TTC3-225ENST00000540756 GPR25O00155 361 aa26.58■■□□□ 1.85
TTC3-225ENST00000540756 MYCNP04198 464 aaPredicted RBP26.58■■□□□ 1.85
TTC3-225ENST00000540756 KLHL30Q0D2K2 578 aa26.58■■□□□ 1.85
TTC3-225ENST00000540756 DNAJB3Q8WWF6 145 aa26.58■■□□□ 1.85
TTC3-225ENST00000540756 STK33Q9BYT3 514 aa26.58■■□□□ 1.85
TTC3-225ENST00000540756 DEF6Q9H4E7 631 aa26.58■■□□□ 1.85
TTC3-225ENST00000540756 COQ4Q9Y3A0 265 aa26.58■■□□□ 1.85
TTC3-225ENST00000540756 GPR32O75388 356 aa26.57■■□□□ 1.84
TTC3-225ENST00000540756 GFPT2O94808 682 aa26.57■■□□□ 1.84
TTC3-225ENST00000540756 RARBP10826 455 aa26.57■■□□□ 1.84
TTC3-225ENST00000540756 ARF4P18085 180 aaPredicted RBP26.57■■□□□ 1.84
TTC3-225ENST00000540756 MAPK8IP2Q13387 824 aaPredicted RBP26.57■■□□□ 1.84
TTC3-225ENST00000540756 C15orf39Q6ZRI6 1047 aa26.57■■□□□ 1.84
TTC3-225ENST00000540756 CDT1Q9H211 546 aa26.57■■□□□ 1.84
TTC3-225ENST00000540756 TNFSF13BQ9Y275 285 aa26.57■■□□□ 1.84
TTC3-225ENST00000540756 OGTO15294 1046 aa26.56■■□□□ 1.84
TTC3-225ENST00000540756 AKR1B10O60218 316 aa26.56■■□□□ 1.84
TTC3-225ENST00000540756 ZEB2O60315 1214 aa26.56■■□□□ 1.84
TTC3-225ENST00000540756 GTF2H1P32780 548 aa26.56■■□□□ 1.84
TTC3-225ENST00000540756 PTK2Q05397 1052 aa26.56■■□□□ 1.84
TTC3-225ENST00000540756 FAM187BQ17R55 369 aa26.56■■□□□ 1.84
TTC3-225ENST00000540756 TDRD10Q5VZ19 366 aaKnown RBP26.56■■□□□ 1.84
TTC3-225ENST00000540756 USP37Q86T82 979 aa26.56■■□□□ 1.84
TTC3-225ENST00000540756 FBXL13Q8NEE6 735 aa26.56■■□□□ 1.84
TTC3-225ENST00000540756 OR5B17Q8NGF7 314 aa26.56■■□□□ 1.84
TTC3-225ENST00000540756 FAM212AQ96EL1 285 aa26.56■■□□□ 1.84
TTC3-225ENST00000540756 CPSF3Q9UKF6 684 aaKnown RBP26.56■■□□□ 1.84
TTC3-225ENST00000540756 C4BPAP04003 597 aaKnown RBP26.56■■□□□ 1.84
TTC3-225ENST00000540756 ETF1P62495 437 aaKnown RBP26.56■■□□□ 1.84
TTC3-225ENST00000540756 ZNF571Q7Z3V5 609 aaPredicted RBP26.56■■□□□ 1.84
TTC3-225ENST00000540756 WDR24Q96S15 920 aa26.56■■□□□ 1.84
TTC3-225ENST00000540756 LACRTQ9GZZ8 138 aa26.56■■□□□ 1.84
TTC3-225ENST00000540756 UPF3AQ9H1J1 476 aaKnown RBP26.56■■□□□ 1.84
TTC3-225ENST00000540756 PDZD7Q9H5P4 517 aa26.56■■□□□ 1.84
TTC3-225ENST00000540756 RAB20Q9NX57 234 aa26.56■■□□□ 1.84
TTC3-225ENST00000540756 SCN10AQ9Y5Y9 1956 aa26.55■■□□□ 1.84
TTC3-225ENST00000540756 SMIM35A0A1B0GVV1 85 aa26.55■■□□□ 1.84
TTC3-225ENST00000540756 FOXN3O00409 490 aaPredicted RBP26.55■■□□□ 1.84
TTC3-225ENST00000540756 ADAMTS4O75173 837 aa26.55■■□□□ 1.84
TTC3-225ENST00000540756 BRSK2Q8IWQ3 736 aa26.55■■□□□ 1.84
TTC3-225ENST00000540756 C7orf31Q8N865 590 aa26.55■■□□□ 1.84
TTC3-225ENST00000540756 OSMRQ99650 979 aa26.55■■□□□ 1.84
TTC3-225ENST00000540756 KATNAL1Q9BW62 490 aa26.55■■□□□ 1.84
TTC3-225ENST00000540756 XPNPEP3Q9NQH7 507 aa26.55■■□□□ 1.84
TTC3-225ENST00000540756 DNAI1Q9UI46 699 aa26.55■■□□□ 1.84
TTC3-225ENST00000540756 MYO6Q9UM54 1294 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms