RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 METTL22Q9BUU2 404 aaPredicted RBP11.75□□□□□ -0.53
PBX1-212ENST00000540236 SPC25Q9HBM1 224 aa11.75□□□□□ -0.53
PBX1-212ENST00000540236 WDR70Q9NW82 654 aa11.75□□□□□ -0.53
PBX1-212ENST00000540236 PRKAG3Q9UGI9 489 aa11.75□□□□□ -0.53
PBX1-212ENST00000540236 HEY1Q9Y5J3 304 aa11.75□□□□□ -0.53
PBX1-212ENST00000540236 H7C1W4 665 aa11.74□□□□□ -0.53
PBX1-212ENST00000540236 EYA2O00167 538 aa11.74□□□□□ -0.53
PBX1-212ENST00000540236 PSMD11O00231 422 aa11.74□□□□□ -0.53
PBX1-212ENST00000540236 KLHL41O60662 606 aa11.74□□□□□ -0.53
PBX1-212ENST00000540236 MYL2P10916 166 aa11.74□□□□□ -0.53
PBX1-212ENST00000540236 RPL21P46778 160 aaKnown RBP11.74□□□□□ -0.53
PBX1-212ENST00000540236 LIN52Q52LA3 116 aa11.74□□□□□ -0.53
PBX1-212ENST00000540236 LRRC6Q86X45 466 aa11.74□□□□□ -0.53
PBX1-212ENST00000540236 PARP8Q8N3A8 854 aa11.74□□□□□ -0.53
PBX1-212ENST00000540236 CYGBQ8WWM9 190 aa11.74□□□□□ -0.53
PBX1-212ENST00000540236 SLITRK6Q9H5Y7 841 aa11.74□□□□□ -0.53
PBX1-212ENST00000540236 PTK2Q05397 1052 aa11.74□□□□□ -0.53
PBX1-212ENST00000540236 TMEM214Q6NUQ4 689 aaKnown RBP11.74□□□□□ -0.53
PBX1-212ENST00000540236 ANKRD2Q9GZV1 360 aa11.74□□□□□ -0.53
PBX1-212ENST00000540236 CDC42EP4Q9H3Q1 356 aaKnown RBP11.74□□□□□ -0.53
PBX1-212ENST00000540236 GPCPD1Q9NPB8 672 aa11.74□□□□□ -0.53
PBX1-212ENST00000540236 TYW1Q9NV66 732 aaKnown RBP11.74□□□□□ -0.53
PBX1-212ENST00000540236 GGA2Q9UJY4 613 aa11.74□□□□□ -0.53
PBX1-212ENST00000540236 TRIM17Q9Y577 477 aa11.74□□□□□ -0.53
PBX1-212ENST00000540236 CLTCL1P53675 1640 aa11.74□□□□□ -0.53
PBX1-212ENST00000540236 DLGAP3O95886 979 aa11.74□□□□□ -0.53
PBX1-212ENST00000540236 HIRAP54198 1017 aaPredicted RBP11.74□□□□□ -0.53
PBX1-212ENST00000540236 HPCAP84074 193 aa11.74□□□□□ -0.53
PBX1-212ENST00000540236 ZNF333Q96JL9 665 aa11.74□□□□□ -0.53
PBX1-212ENST00000540236 FRMPD2Q68DX3 1309 aaPredicted RBP11.74□□□□□ -0.53
PBX1-212ENST00000540236 ZSCAN9O15535 394 aaPredicted RBP11.74□□□□□ -0.53
PBX1-212ENST00000540236 PEX11AO75192 247 aa11.74□□□□□ -0.53
PBX1-212ENST00000540236 BNIP1Q12981 228 aa11.74□□□□□ -0.53
PBX1-212ENST00000540236 NEK10Q6ZWH5 1172 aa11.74□□□□□ -0.53
PBX1-212ENST00000540236 RFWD2Q8NHY2 731 aa11.74□□□□□ -0.53
PBX1-212ENST00000540236 TUBB6Q9BUF5 446 aa11.74□□□□□ -0.53
PBX1-212ENST00000540236 HEMK1Q9Y5R4 338 aaPredicted RBP11.74□□□□□ -0.53
PBX1-212ENST00000540236 ZC3H11AO75152 810 aaKnown RBP eCLIP11.74□□□□□ -0.53
PBX1-212ENST00000540236 ZMPSTE24O75844 475 aa11.74□□□□□ -0.53
PBX1-212ENST00000540236 ASLP04424 464 aa11.74□□□□□ -0.53
PBX1-212ENST00000540236 PTPN12Q05209 780 aaKnown RBP11.74□□□□□ -0.53
PBX1-212ENST00000540236 ANKRD23Q86SG2 305 aa11.74□□□□□ -0.53
PBX1-212ENST00000540236 TBATAQ96M53 351 aa11.74□□□□□ -0.53
PBX1-212ENST00000540236 LZTS2Q9BRK4 669 aa11.74□□□□□ -0.53
PBX1-212ENST00000540236 HAUS8Q9BT25 410 aa11.74□□□□□ -0.53
PBX1-212ENST00000540236 INPP5FQ9Y2H2 1132 aa11.74□□□□□ -0.53
PBX1-212ENST00000540236 ASMTLO95671 621 aa11.73□□□□□ -0.53
PBX1-212ENST00000540236 P4HA1P13674 534 aa11.73□□□□□ -0.53
PBX1-212ENST00000540236 RPA3P35244 121 aaPredicted RBP11.73□□□□□ -0.53
PBX1-212ENST00000540236 ITPRIPL1Q6GPH6 555 aa11.73□□□□□ -0.53
PBX1-212ENST00000540236 PTPRN2Q92932 1015 aa11.73□□□□□ -0.53
PBX1-212ENST00000540236 ARL8BQ9NVJ2 186 aa11.73□□□□□ -0.53
PBX1-212ENST00000540236 MAD1L1Q9Y6D9 718 aa11.73□□□□□ -0.53
PBX1-212ENST00000540236 ARHGEF5Q12774 1597 aa11.73□□□□□ -0.53
PBX1-212ENST00000540236 LINC00854A0A1B0GVQ3 168 aa11.73□□□□□ -0.53
PBX1-212ENST00000540236 TAF4O00268 1085 aa11.73□□□□□ -0.53
PBX1-212ENST00000540236 CYP26A1O43174 497 aa11.73□□□□□ -0.53
PBX1-212ENST00000540236 BBS9Q3SYG4 887 aa11.73□□□□□ -0.53
PBX1-212ENST00000540236 KLHDC10Q6PID8 442 aa11.73□□□□□ -0.53
PBX1-212ENST00000540236 CCDC68Q9H2F9 335 aa11.73□□□□□ -0.53
PBX1-212ENST00000540236 PCIF1Q9H4Z3 704 aa11.73□□□□□ -0.53
PBX1-212ENST00000540236 BARX2Q9UMQ3 279 aaPredicted RBP11.73□□□□□ -0.53
PBX1-212ENST00000540236 WDR37Q9Y2I8 494 aa11.73□□□□□ -0.53
PBX1-212ENST00000540236 HBS1LQ9Y450 684 aaKnown RBP11.73□□□□□ -0.53
PBX1-212ENST00000540236 O00370 1275 aa11.73□□□□□ -0.53
PBX1-212ENST00000540236 TSC22D2O75157 780 aa11.73□□□□□ -0.53
PBX1-212ENST00000540236 INHBAP08476 426 aa11.73□□□□□ -0.53
PBX1-212ENST00000540236 PLOD1Q02809 727 aaPredicted RBP11.73□□□□□ -0.53
PBX1-212ENST00000540236 RIPK1Q13546 671 aa11.73□□□□□ -0.53
PBX1-212ENST00000540236 NRF1Q16656 503 aa11.73□□□□□ -0.53
PBX1-212ENST00000540236 ZNF786Q8N393 782 aa11.73□□□□□ -0.53
PBX1-212ENST00000540236 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.73□□□□□ -0.53
PBX1-212ENST00000540236 PPP4R1Q8TF05 950 aa11.73□□□□□ -0.53
PBX1-212ENST00000540236 PDCD6IPQ8WUM4 868 aaKnown RBP11.73□□□□□ -0.53
PBX1-212ENST00000540236 ZNF263O14978 683 aa11.73□□□□□ -0.53
PBX1-212ENST00000540236 CALML3P27482 149 aa11.73□□□□□ -0.53
PBX1-212ENST00000540236 CHN2P52757 468 aa11.73□□□□□ -0.53
PBX1-212ENST00000540236 SH3RF1Q7Z6J0 888 aa11.73□□□□□ -0.53
PBX1-212ENST00000540236 AMIGO2Q86SJ2 522 aa11.73□□□□□ -0.53
PBX1-212ENST00000540236 ALYREFQ86V81 257 aaKnown RBP11.73□□□□□ -0.53
PBX1-212ENST00000540236 ZNF579Q8NAF0 562 aaKnown RBP11.73□□□□□ -0.53
PBX1-212ENST00000540236 ANKS1AQ92625 1134 aa11.73□□□□□ -0.53
PBX1-212ENST00000540236 DHRS1Q96LJ7 313 aa11.73□□□□□ -0.53
PBX1-212ENST00000540236 MANSC1Q9H8J5 431 aa11.73□□□□□ -0.53
PBX1-212ENST00000540236 SMYD2Q9NRG4 433 aa11.73□□□□□ -0.53
PBX1-212ENST00000540236 NEMP1O14524 444 aa11.73□□□□□ -0.53
PBX1-212ENST00000540236 GNPATO15228 680 aa11.73□□□□□ -0.53
PBX1-212ENST00000540236 NEK2P51955 445 aa11.73□□□□□ -0.53
PBX1-212ENST00000540236 TRPC3Q13507 836 aa11.73□□□□□ -0.53
PBX1-212ENST00000540236 RASA3Q14644 834 aa11.73□□□□□ -0.53
PBX1-212ENST00000540236 GRK7Q8WTQ7 553 aa11.73□□□□□ -0.53
PBX1-212ENST00000540236 CCDC90BQ9GZT6 254 aa11.73□□□□□ -0.53
PBX1-212ENST00000540236 C6orf50Q9HD87 102 aa11.73□□□□□ -0.53
PBX1-212ENST00000540236 RRN3Q9NYV6 651 aa11.73□□□□□ -0.53
PBX1-212ENST00000540236 TMEM247A6NEH6 219 aa11.72□□□□□ -0.53
PBX1-212ENST00000540236 NPHP4O75161 1426 aaPredicted RBP11.72□□□□□ -0.53
PBX1-212ENST00000540236 ZBTB11O95625 1053 aaPredicted RBP11.72□□□□□ -0.53
PBX1-212ENST00000540236 HARSP12081 509 aaKnown RBP11.72□□□□□ -0.53
PBX1-212ENST00000540236 AKR1B1P15121 316 aa11.72□□□□□ -0.53
PBX1-212ENST00000540236 KRT4P19013 534 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms