RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 TDGQ13569 410 aa16.87■□□□□ 0.29
UBE3B-211ENST00000539843 IER5LQ5T953 404 aa16.87■□□□□ 0.29
UBE3B-211ENST00000539843 LIN9Q5TKA1 542 aa16.87■□□□□ 0.29
UBE3B-211ENST00000539843 KRT79Q5XKE5 535 aa16.87■□□□□ 0.29
UBE3B-211ENST00000539843 PALB2Q86YC2 1186 aa16.87■□□□□ 0.29
UBE3B-211ENST00000539843 RNF168Q8IYW5 571 aaPredicted RBP16.87■□□□□ 0.29
UBE3B-211ENST00000539843 SNX29Q8TEQ0 813 aa16.87■□□□□ 0.29
UBE3B-211ENST00000539843 SMG7Q92540 1137 aaKnown RBP16.87■□□□□ 0.29
UBE3B-211ENST00000539843 CHST7Q9NS84 486 aa16.87■□□□□ 0.29
UBE3B-211ENST00000539843 ZDHHC7Q9NXF8 308 aa16.87■□□□□ 0.29
UBE3B-211ENST00000539843 ZNF318Q5VUA4 2279 aa16.87■□□□□ 0.29
UBE3B-211ENST00000539843 CLUHO75153 1309 aa16.87■□□□□ 0.29
UBE3B-211ENST00000539843 YARSP54577 528 aaKnown RBP16.86■□□□□ 0.29
UBE3B-211ENST00000539843 VCPP55072 806 aaKnown RBP16.86■□□□□ 0.29
UBE3B-211ENST00000539843 ST3GAL1Q11201 340 aa16.86■□□□□ 0.29
UBE3B-211ENST00000539843 PDIA5Q14554 519 aa16.86■□□□□ 0.29
UBE3B-211ENST00000539843 TAS1R1Q7RTX1 841 aa16.86■□□□□ 0.29
UBE3B-211ENST00000539843 ATOH1Q92858 354 aaPredicted RBP16.86■□□□□ 0.29
UBE3B-211ENST00000539843 TTPALQ9BTX7 342 aa16.86■□□□□ 0.29
UBE3B-211ENST00000539843 BHMT2Q9H2M3 363 aa16.86■□□□□ 0.29
UBE3B-211ENST00000539843 PDZD7Q9H5P4 517 aa16.86■□□□□ 0.29
UBE3B-211ENST00000539843 WDR6Q9NNW5 1121 aaKnown RBP16.86■□□□□ 0.29
UBE3B-211ENST00000539843 SNTG2Q9NY99 539 aa16.86■□□□□ 0.29
UBE3B-211ENST00000539843 KIAA1024Q9UPX6 916 aa16.86■□□□□ 0.29
UBE3B-211ENST00000539843 CASTOR2A6NHX0 329 aa16.85■□□□□ 0.29
UBE3B-211ENST00000539843 ST18O60284 1047 aa16.85■□□□□ 0.29
UBE3B-211ENST00000539843 RECQL4O94761 1208 aa16.85■□□□□ 0.29
UBE3B-211ENST00000539843 DMP1Q13316 513 aaPredicted RBP16.85■□□□□ 0.29
UBE3B-211ENST00000539843 ASTLQ6HA08 431 aaPredicted RBP16.85■□□□□ 0.29
UBE3B-211ENST00000539843 CEP57Q86XR8 500 aa16.85■□□□□ 0.29
UBE3B-211ENST00000539843 GLYCTKQ8IVS8 523 aa16.85■□□□□ 0.29
UBE3B-211ENST00000539843 GSTCDQ8NEC7 633 aa16.85■□□□□ 0.29
UBE3B-211ENST00000539843 NXPE3Q969Y0 559 aa16.85■□□□□ 0.29
UBE3B-211ENST00000539843 GPR62Q9BZJ7 368 aa16.85■□□□□ 0.29
UBE3B-211ENST00000539843 UPF2Q9HAU5 1272 aaKnown RBP16.85■□□□□ 0.29
UBE3B-211ENST00000539843 TOPORSQ9NS56 1045 aaPredicted RBP16.85■□□□□ 0.29
UBE3B-211ENST00000539843 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.85■□□□□ 0.29
UBE3B-211ENST00000539843 KCNG1Q9UIX4 513 aa16.85■□□□□ 0.29
UBE3B-211ENST00000539843 DNM3Q9UQ16 869 aa16.85■□□□□ 0.29
UBE3B-211ENST00000539843 ZDBF2Q9HCK1 2354 aa16.85■□□□□ 0.29
UBE3B-211ENST00000539843 K7ERI5 159 aa16.84■□□□□ 0.29
UBE3B-211ENST00000539843 TGM5O43548 720 aa16.84■□□□□ 0.29
UBE3B-211ENST00000539843 GALR2O43603 387 aaPredicted RBP16.84■□□□□ 0.29
UBE3B-211ENST00000539843 TRAPPC3O43617 180 aa16.84■□□□□ 0.29
UBE3B-211ENST00000539843 SEC24BO95487 1268 aa16.84■□□□□ 0.29
UBE3B-211ENST00000539843 TCF15Q12870 199 aa16.84■□□□□ 0.29
UBE3B-211ENST00000539843 ATF7IP2Q5U623 682 aa16.84■□□□□ 0.29
UBE3B-211ENST00000539843 FAM171A1Q5VUB5 890 aa16.84■□□□□ 0.29
UBE3B-211ENST00000539843 FLCNQ8NFG4 579 aa16.84■□□□□ 0.29
UBE3B-211ENST00000539843 DRC1Q96MC2 740 aa16.84■□□□□ 0.29
UBE3B-211ENST00000539843 CCDC94Q9BW85 323 aaPredicted RBP16.84■□□□□ 0.29
UBE3B-211ENST00000539843 KCNK12Q9HB15 430 aa16.84■□□□□ 0.29
UBE3B-211ENST00000539843 DDX19AQ9NUU7 478 aaKnown RBP16.84■□□□□ 0.29
UBE3B-211ENST00000539843 DUSP12Q9UNI6 340 aa16.84■□□□□ 0.29
UBE3B-211ENST00000539843 GDAQ9Y2T3 454 aa16.84■□□□□ 0.29
UBE3B-211ENST00000539843 CCDC169A6NNP5 214 aa16.83■□□□□ 0.28
UBE3B-211ENST00000539843 RFPL2O75678 378 aa16.83■□□□□ 0.28
UBE3B-211ENST00000539843 EFEMP2O95967 443 aa16.83■□□□□ 0.28
UBE3B-211ENST00000539843 PDGFBP01127 241 aaPredicted RBP16.83■□□□□ 0.28
UBE3B-211ENST00000539843 MYBP10242 640 aa16.83■□□□□ 0.28
UBE3B-211ENST00000539843 CLCN5P51795 746 aa16.83■□□□□ 0.28
UBE3B-211ENST00000539843 PTGDRQ13258 359 aa16.83■□□□□ 0.28
UBE3B-211ENST00000539843 PSMD5Q16401 504 aa16.83■□□□□ 0.28
UBE3B-211ENST00000539843 MCTP1Q6DN14 999 aa16.83■□□□□ 0.28
UBE3B-211ENST00000539843 DTHD1Q6ZMT9 781 aa16.83■□□□□ 0.28
UBE3B-211ENST00000539843 HASPINQ8TF76 798 aa16.83■□□□□ 0.28
UBE3B-211ENST00000539843 PIK3R5Q8WYR1 880 aa16.83■□□□□ 0.28
UBE3B-211ENST00000539843 BSNDQ8WZ55 320 aa16.83■□□□□ 0.28
UBE3B-211ENST00000539843 B3GALT6Q96L58 329 aa16.83■□□□□ 0.28
UBE3B-211ENST00000539843 UROC1Q96N76 676 aa16.83■□□□□ 0.28
UBE3B-211ENST00000539843 PRKD2Q9BZL6 878 aa16.83■□□□□ 0.28
UBE3B-211ENST00000539843 CCDC113Q9H0I3 377 aa16.83■□□□□ 0.28
UBE3B-211ENST00000539843 NT5C3AQ9H0P0 336 aa16.83■□□□□ 0.28
UBE3B-211ENST00000539843 C5orf42Q9H799 3197 aa16.83■□□□□ 0.28
UBE3B-211ENST00000539843 TDRD15B5MCY1 1934 aaKnown RBP16.82■□□□□ 0.28
UBE3B-211ENST00000539843 F8W810 466 aa16.82■□□□□ 0.28
UBE3B-211ENST00000539843 STK25O00506 426 aa16.82■□□□□ 0.28
UBE3B-211ENST00000539843 XYLBO75191 536 aa16.82■□□□□ 0.28
UBE3B-211ENST00000539843 KIF4AO95239 1232 aa16.82■□□□□ 0.28
UBE3B-211ENST00000539843 SPATA31D3P0C874 917 aa16.82■□□□□ 0.28
UBE3B-211ENST00000539843 U2AF2P26368 475 aaKnown RBP eCLIP16.82■□□□□ 0.28
UBE3B-211ENST00000539843 RABEP1Q15276 862 aa16.82■□□□□ 0.28
UBE3B-211ENST00000539843 RILPL1Q5EBL4 403 aa16.82■□□□□ 0.28
UBE3B-211ENST00000539843 PPM1LQ5SGD2 360 aa16.82■□□□□ 0.28
UBE3B-211ENST00000539843 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.82■□□□□ 0.28
UBE3B-211ENST00000539843 SPATA31D4Q6ZUB0 917 aa16.82■□□□□ 0.28
UBE3B-211ENST00000539843 GET4Q7L5D6 327 aaPredicted RBP16.82■□□□□ 0.28
UBE3B-211ENST00000539843 RABGGTAQ92696 567 aa16.82■□□□□ 0.28
UBE3B-211ENST00000539843 CDK5RAP3Q96JB5 506 aa16.82■□□□□ 0.28
UBE3B-211ENST00000539843 RTP3Q9BQQ7 232 aa16.82■□□□□ 0.28
UBE3B-211ENST00000539843 KIFC3Q9BVG8 833 aa16.82■□□□□ 0.28
UBE3B-211ENST00000539843 TIPINQ9BVW5 301 aa16.82■□□□□ 0.28
UBE3B-211ENST00000539843 MRPL4Q9BYD3 311 aaKnown RBP16.82■□□□□ 0.28
UBE3B-211ENST00000539843 C17orf75Q9HAS0 396 aa16.82■□□□□ 0.28
UBE3B-211ENST00000539843 SLC38A7Q9NVC3 462 aa16.82■□□□□ 0.28
UBE3B-211ENST00000539843 EPS15L1Q9UBC2 864 aa16.82■□□□□ 0.28
UBE3B-211ENST00000539843 RBM19Q9Y4C8 960 aaKnown RBP16.82■□□□□ 0.28
UBE3B-211ENST00000539843 ZFP37Q9Y6Q3 630 aaPredicted RBP16.82■□□□□ 0.28
UBE3B-211ENST00000539843 H3BQV1 296 aa16.81■□□□□ 0.28
UBE3B-211ENST00000539843 ZMYND10O75800 440 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms