RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 TMEM134Q9H6X4 195 aa18.48■□□□□ 0.55
PCDHB17P-201ENST00000539533 CA12O43570 354 aa18.47■□□□□ 0.55
PCDHB17P-201ENST00000539533 CYP27A1Q02318 531 aa18.47■□□□□ 0.55
PCDHB17P-201ENST00000539533 MXD4Q14582 209 aaPredicted RBP18.47■□□□□ 0.55
PCDHB17P-201ENST00000539533 COG1Q8WTW3 980 aa18.47■□□□□ 0.55
PCDHB17P-201ENST00000539533 LACRTQ9GZZ8 138 aa18.47■□□□□ 0.55
PCDHB17P-201ENST00000539533 NUCKS1Q9H1E3 243 aaKnown RBP18.47■□□□□ 0.55
PCDHB17P-201ENST00000539533 RCCD1A6NED2 376 aa18.47■□□□□ 0.55
PCDHB17P-201ENST00000539533 KLRC1P26715 233 aa18.47■□□□□ 0.55
PCDHB17P-201ENST00000539533 RGS2P41220 211 aa18.47■□□□□ 0.55
PCDHB17P-201ENST00000539533 MAGEA9P43362 315 aa18.47■□□□□ 0.55
PCDHB17P-201ENST00000539533 TTC31Q49AM3 519 aaPredicted RBP18.47■□□□□ 0.55
PCDHB17P-201ENST00000539533 ZNF484Q5JVG2 852 aa18.47■□□□□ 0.55
PCDHB17P-201ENST00000539533 OLFML2BQ68BL8 750 aa18.47■□□□□ 0.55
PCDHB17P-201ENST00000539533 IQCEQ6IPM2 695 aa18.47■□□□□ 0.55
PCDHB17P-201ENST00000539533 PARD3BQ8TEW8 1205 aa18.47■□□□□ 0.55
PCDHB17P-201ENST00000539533 SYN2Q92777 582 aaPredicted RBP18.47■□□□□ 0.55
PCDHB17P-201ENST00000539533 MFSD14AQ96MC6 490 aa18.47■□□□□ 0.55
PCDHB17P-201ENST00000539533 JPH2Q9BR39 696 aaPredicted RBP18.47■□□□□ 0.55
PCDHB17P-201ENST00000539533 EVPLQ92817 2033 aa18.47■□□□□ 0.55
PCDHB17P-201ENST00000539533 ZNF263O14978 683 aa18.46■□□□□ 0.55
PCDHB17P-201ENST00000539533 PIGRP01833 764 aa18.46■□□□□ 0.55
PCDHB17P-201ENST00000539533 SCP2P22307 547 aa18.46■□□□□ 0.55
PCDHB17P-201ENST00000539533 ENOX2Q16206 610 aaKnown RBP18.46■□□□□ 0.55
PCDHB17P-201ENST00000539533 LMO3Q8TAP4 145 aa18.46■□□□□ 0.55
PCDHB17P-201ENST00000539533 HHIPL1Q96JK4 782 aa18.46■□□□□ 0.55
PCDHB17P-201ENST00000539533 SPAG5Q96R06 1193 aa18.46■□□□□ 0.55
PCDHB17P-201ENST00000539533 ARHGAP39Q9C0H5 1083 aa18.46■□□□□ 0.55
PCDHB17P-201ENST00000539533 INTS2Q9H0H0 1204 aaKnown RBP18.46■□□□□ 0.55
PCDHB17P-201ENST00000539533 AIPL1Q9NZN9 384 aa18.46■□□□□ 0.55
PCDHB17P-201ENST00000539533 GNEQ9Y223 722 aaKnown RBP18.46■□□□□ 0.55
PCDHB17P-201ENST00000539533 STYXL1Q9Y6J8 313 aa18.46■□□□□ 0.55
PCDHB17P-201ENST00000539533 SIP14410 1827 aa18.46■□□□□ 0.55
PCDHB17P-201ENST00000539533 EIF3CLB5ME19 914 aaKnown RBP18.46■□□□□ 0.55
PCDHB17P-201ENST00000539533 IPO7O95373 1038 aaKnown RBP18.46■□□□□ 0.55
PCDHB17P-201ENST00000539533 HOXD8P13378 290 aaPredicted RBP18.46■□□□□ 0.55
PCDHB17P-201ENST00000539533 DGKDQ16760 1214 aa18.46■□□□□ 0.55
PCDHB17P-201ENST00000539533 CDCA2Q69YH5 1023 aaPredicted RBP18.46■□□□□ 0.55
PCDHB17P-201ENST00000539533 PACS2Q86VP3 889 aa18.46■□□□□ 0.55
PCDHB17P-201ENST00000539533 CAGE1Q8TC20 777 aa18.46■□□□□ 0.55
PCDHB17P-201ENST00000539533 NLRP4Q96MN2 994 aa18.46■□□□□ 0.55
PCDHB17P-201ENST00000539533 EIF3CQ99613 913 aaKnown RBP18.46■□□□□ 0.55
PCDHB17P-201ENST00000539533 TMEM117Q9H0C3 514 aa18.46■□□□□ 0.55
PCDHB17P-201ENST00000539533 YY1AP1Q9H869 796 aa18.46■□□□□ 0.55
PCDHB17P-201ENST00000539533 ANKFY1Q9P2R3 1169 aa18.46■□□□□ 0.55
PCDHB17P-201ENST00000539533 FBXL5Q9UKA1 691 aa18.46■□□□□ 0.55
PCDHB17P-201ENST00000539533 ANO9A1A5B4 782 aa18.45■□□□□ 0.54
PCDHB17P-201ENST00000539533 MSCO60682 206 aa18.45■□□□□ 0.54
PCDHB17P-201ENST00000539533 ZMYND10O75800 440 aa18.45■□□□□ 0.54
PCDHB17P-201ENST00000539533 ACOT2P49753 483 aa18.45■□□□□ 0.54
PCDHB17P-201ENST00000539533 KIF11P52732 1056 aa18.45■□□□□ 0.54
PCDHB17P-201ENST00000539533 MCCD1P59942 119 aaPredicted RBP18.45■□□□□ 0.54
PCDHB17P-201ENST00000539533 CYP24A1Q07973 514 aa18.45■□□□□ 0.54
PCDHB17P-201ENST00000539533 TDRD12Q587J7 1177 aaKnown RBP18.45■□□□□ 0.54
PCDHB17P-201ENST00000539533 CCDC113Q9H0I3 377 aa18.45■□□□□ 0.54
PCDHB17P-201ENST00000539533 DEF6Q9H4E7 631 aa18.45■□□□□ 0.54
PCDHB17P-201ENST00000539533 TOPORSQ9NS56 1045 aaPredicted RBP18.45■□□□□ 0.54
PCDHB17P-201ENST00000539533 AGO2Q9UKV8 859 aaKnown RBP18.45■□□□□ 0.54
PCDHB17P-201ENST00000539533 PDE2AO00408 941 aaPredicted RBP18.45■□□□□ 0.54
PCDHB17P-201ENST00000539533 EXTL3O43909 919 aa18.45■□□□□ 0.54
PCDHB17P-201ENST00000539533 AOC2O75106 756 aa18.45■□□□□ 0.54
PCDHB17P-201ENST00000539533 EFNA5P52803 228 aa18.45■□□□□ 0.54
PCDHB17P-201ENST00000539533 NLRP11P59045 1033 aaKnown RBP18.45■□□□□ 0.54
PCDHB17P-201ENST00000539533 SLC9C1Q4G0N8 1177 aa18.45■□□□□ 0.54
PCDHB17P-201ENST00000539533 PPP1R13LQ8WUF5 828 aa18.45■□□□□ 0.54
PCDHB17P-201ENST00000539533 APBA2Q99767 749 aa18.45■□□□□ 0.54
PCDHB17P-201ENST00000539533 A6NJR5 290 aa18.44■□□□□ 0.54
PCDHB17P-201ENST00000539533 ZNF233A6NK53 670 aa18.44■□□□□ 0.54
PCDHB17P-201ENST00000539533 ZNF185O15231 689 aa18.44■□□□□ 0.54
PCDHB17P-201ENST00000539533 AKR1B10O60218 316 aa18.44■□□□□ 0.54
PCDHB17P-201ENST00000539533 SERPING1P05155 500 aa18.44■□□□□ 0.54
PCDHB17P-201ENST00000539533 DLATP10515 647 aaKnown RBP18.44■□□□□ 0.54
PCDHB17P-201ENST00000539533 MATR3P43243 847 aaKnown RBP eCLIP18.44■□□□□ 0.54
PCDHB17P-201ENST00000539533 JAM2P57087 298 aa18.44■□□□□ 0.54
PCDHB17P-201ENST00000539533 MAP2K1Q02750 393 aaPredicted RBP18.44■□□□□ 0.54
PCDHB17P-201ENST00000539533 ASTE1Q2TB18 679 aaPredicted RBP18.44■□□□□ 0.54
PCDHB17P-201ENST00000539533 ZBTB41Q5SVQ8 909 aa18.44■□□□□ 0.54
PCDHB17P-201ENST00000539533 PHLDB3Q6NSJ2 640 aa18.44■□□□□ 0.54
PCDHB17P-201ENST00000539533 CRELD2Q6UXH1 353 aaPredicted RBP18.44■□□□□ 0.54
PCDHB17P-201ENST00000539533 IRF2BP2Q7Z5L9 587 aa18.44■□□□□ 0.54
PCDHB17P-201ENST00000539533 ZBTB8OSQ8IWT0 167 aa18.44■□□□□ 0.54
PCDHB17P-201ENST00000539533 SOCS4Q8WXH5 440 aa18.44■□□□□ 0.54
PCDHB17P-201ENST00000539533 FAM84AQ96KN4 292 aa18.44■□□□□ 0.54
PCDHB17P-201ENST00000539533 GDAP1L1Q96MZ0 367 aa18.44■□□□□ 0.54
PCDHB17P-201ENST00000539533 DNAJC12Q9UKB3 198 aa18.44■□□□□ 0.54
PCDHB17P-201ENST00000539533 DUSP10Q9Y6W6 482 aa18.44■□□□□ 0.54
PCDHB17P-201ENST00000539533 TOMM70O94826 608 aa18.44■□□□□ 0.54
PCDHB17P-201ENST00000539533 MYBL2P10244 700 aa18.44■□□□□ 0.54
PCDHB17P-201ENST00000539533 MXI1P50539 228 aa18.44■□□□□ 0.54
PCDHB17P-201ENST00000539533 ASIC2Q16515 512 aa18.44■□□□□ 0.54
PCDHB17P-201ENST00000539533 EPC2Q52LR7 807 aa18.44■□□□□ 0.54
PCDHB17P-201ENST00000539533 SEZ6Q53EL9 994 aa18.44■□□□□ 0.54
PCDHB17P-201ENST00000539533 CCNI2Q6ZMN8 369 aaPredicted RBP18.44■□□□□ 0.54
PCDHB17P-201ENST00000539533 TLK2Q86UE8 772 aa18.44■□□□□ 0.54
PCDHB17P-201ENST00000539533 GSPT2Q8IYD1 628 aaKnown RBP18.44■□□□□ 0.54
PCDHB17P-201ENST00000539533 TMC2Q8TDI7 906 aa18.44■□□□□ 0.54
PCDHB17P-201ENST00000539533 PPP1R16BQ96T49 567 aa18.44■□□□□ 0.54
PCDHB17P-201ENST00000539533 MSTO1Q9BUK6 570 aa18.44■□□□□ 0.54
PCDHB17P-201ENST00000539533 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.44■□□□□ 0.54
PCDHB17P-201ENST00000539533 APEX2Q9UBZ4 518 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms