RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 CLDN10P78369 228 aa13.4□□□□□ -0.26
DDB1-209ENST00000537877 KCNMA1Q12791 1236 aa13.4□□□□□ -0.26
DDB1-209ENST00000537877 RALGAPA2Q2PPJ7 1873 aa13.4□□□□□ -0.26
DDB1-209ENST00000537877 FAM26DQ5JW98 314 aa13.4□□□□□ -0.26
DDB1-209ENST00000537877 SLC27A1Q6PCB7 646 aa13.4□□□□□ -0.26
DDB1-209ENST00000537877 CCDC155Q8N6L0 562 aa13.4□□□□□ -0.26
DDB1-209ENST00000537877 U2AF1L4Q8WU68 220 aaKnown RBP13.4□□□□□ -0.26
DDB1-209ENST00000537877 DHX38Q92620 1227 aaKnown RBP13.4□□□□□ -0.26
DDB1-209ENST00000537877 CCDC127Q96BQ5 260 aa13.4□□□□□ -0.26
DDB1-209ENST00000537877 CGRRF1Q99675 332 aa13.4□□□□□ -0.26
DDB1-209ENST00000537877 LSM14BQ9BX40 385 aaKnown RBP13.4□□□□□ -0.26
DDB1-209ENST00000537877 MMRN2Q9H8L6 949 aa13.4□□□□□ -0.26
DDB1-209ENST00000537877 TMEM8AQ9HCN3 771 aa13.4□□□□□ -0.26
DDB1-209ENST00000537877 PLCB1Q9NQ66 1216 aa13.4□□□□□ -0.26
DDB1-209ENST00000537877 TRMT13Q9NUP7 481 aaKnown RBP13.4□□□□□ -0.26
DDB1-209ENST00000537877 GCNT4Q9P109 453 aa13.4□□□□□ -0.26
DDB1-209ENST00000537877 CAPN11Q9UMQ6 739 aa13.4□□□□□ -0.26
DDB1-209ENST00000537877 SQORQ9Y6N5 450 aa13.4□□□□□ -0.26
DDB1-209ENST00000537877 MROH7Q68CQ1 1323 aa13.39□□□□□ -0.27
DDB1-209ENST00000537877 B4GALT4O60513 344 aa13.39□□□□□ -0.27
DDB1-209ENST00000537877 IL18RAPO95256 599 aa13.39□□□□□ -0.27
DDB1-209ENST00000537877 SGPL1O95470 568 aa13.39□□□□□ -0.27
DDB1-209ENST00000537877 CTSHP09668 335 aa13.39□□□□□ -0.27
DDB1-209ENST00000537877 HOXA11P31270 313 aaPredicted RBP13.39□□□□□ -0.27
DDB1-209ENST00000537877 CASP14P31944 242 aa13.39□□□□□ -0.27
DDB1-209ENST00000537877 GRM5P41594 1212 aa13.39□□□□□ -0.27
DDB1-209ENST00000537877 KLK7P49862 253 aa13.39□□□□□ -0.27
DDB1-209ENST00000537877 FXR1P51114 621 aaKnown RBP eCLIP13.39□□□□□ -0.272e-6■■■□□ 16.9
DDB1-209ENST00000537877 AP3M2P53677 418 aa13.39□□□□□ -0.27
DDB1-209ENST00000537877 PPP3CAQ08209 521 aa13.39□□□□□ -0.27
DDB1-209ENST00000537877 RBL2Q08999 1139 aa13.39□□□□□ -0.27
DDB1-209ENST00000537877 CBWD6Q4V339 395 aa13.39□□□□□ -0.27
DDB1-209ENST00000537877 CBWD3Q5JTY5 395 aa13.39□□□□□ -0.27
DDB1-209ENST00000537877 CBWD5Q5RIA9 395 aa13.39□□□□□ -0.27
DDB1-209ENST00000537877 ZBTB41Q5SVQ8 909 aa13.39□□□□□ -0.27
DDB1-209ENST00000537877 KRT39Q6A163 491 aa13.39□□□□□ -0.27
DDB1-209ENST00000537877 FAM228AQ86W67 206 aa13.39□□□□□ -0.27
DDB1-209ENST00000537877 CDR2LQ86X02 465 aaPredicted RBP13.39□□□□□ -0.27
DDB1-209ENST00000537877 LRRC8AQ8IWT6 810 aa13.39□□□□□ -0.27
DDB1-209ENST00000537877 THNSL1Q8IYQ7 743 aa13.39□□□□□ -0.27
DDB1-209ENST00000537877 TC2NQ8N9U0 490 aa13.39□□□□□ -0.27
DDB1-209ENST00000537877 CCDC112Q8NEF3 446 aa13.39□□□□□ -0.27
DDB1-209ENST00000537877 PANX2Q96RD6 677 aa13.39□□□□□ -0.27
DDB1-209ENST00000537877 FAM207AQ9NSI2 230 aaPredicted RBP13.39□□□□□ -0.27
DDB1-209ENST00000537877 PIN4Q9Y237 131 aaKnown RBP13.39□□□□□ -0.27
DDB1-209ENST00000537877 LUC7L2Q9Y383 392 aaKnown RBP13.39□□□□□ -0.27
DDB1-209ENST00000537877 TTC26A0AVF1 554 aa13.38□□□□□ -0.27
DDB1-209ENST00000537877 RPS6KA5O75582 802 aa13.38□□□□□ -0.27
DDB1-209ENST00000537877 CHRNA1P02708 482 aa13.38□□□□□ -0.27
DDB1-209ENST00000537877 STAG3L1P0CL83 205 aa13.38□□□□□ -0.27
DDB1-209ENST00000537877 DLATP10515 647 aaKnown RBP13.38□□□□□ -0.27
DDB1-209ENST00000537877 RFX1P22670 979 aa13.38□□□□□ -0.27
DDB1-209ENST00000537877 TNFSF9P41273 254 aa13.38□□□□□ -0.27
DDB1-209ENST00000537877 GCLMP48507 274 aa13.38□□□□□ -0.27
DDB1-209ENST00000537877 ZBED6P86452 979 aa13.38□□□□□ -0.27
DDB1-209ENST00000537877 ARID5BQ14865 1188 aa13.38□□□□□ -0.27
DDB1-209ENST00000537877 EPC2Q52LR7 807 aa13.38□□□□□ -0.27
DDB1-209ENST00000537877 WDR49Q8IV35 697 aa13.38□□□□□ -0.27
DDB1-209ENST00000537877 FAM126BQ8IXS8 530 aa13.38□□□□□ -0.27
DDB1-209ENST00000537877 CEP120Q8N960 986 aa13.38□□□□□ -0.27
DDB1-209ENST00000537877 ANKLE1Q8NAG6 615 aa13.38□□□□□ -0.27
DDB1-209ENST00000537877 USP38Q8NB14 1042 aa13.38□□□□□ -0.27
DDB1-209ENST00000537877 ZNF397Q8NF99 534 aaPredicted RBP13.38□□□□□ -0.27
DDB1-209ENST00000537877 CAGE1Q8TC20 777 aa13.38□□□□□ -0.27
DDB1-209ENST00000537877 CACTINQ8WUQ7 758 aaKnown RBP13.38□□□□□ -0.27
DDB1-209ENST00000537877 CRACR2AQ9BSW2 395 aa13.38□□□□□ -0.27
DDB1-209ENST00000537877 CCDC94Q9BW85 323 aaPredicted RBP13.38□□□□□ -0.27
DDB1-209ENST00000537877 TMEM117Q9H0C3 514 aa13.38□□□□□ -0.27
DDB1-209ENST00000537877 GANQ9H2C0 597 aa13.38□□□□□ -0.27
DDB1-209ENST00000537877 RPF1Q9H9Y2 349 aaKnown RBP13.38□□□□□ -0.27
DDB1-209ENST00000537877 PDE11AQ9HCR9 933 aa13.38□□□□□ -0.27
DDB1-209ENST00000537877 CEP72Q9P209 647 aa13.38□□□□□ -0.27
DDB1-209ENST00000537877 FBXL5Q9UKA1 691 aa13.38□□□□□ -0.27
DDB1-209ENST00000537877 COQ4Q9Y3A0 265 aa13.38□□□□□ -0.27
DDB1-209ENST00000537877 NOC2LQ9Y3T9 749 aaKnown RBP13.38□□□□□ -0.27
DDB1-209ENST00000537877 ANK1P16157 1881 aa13.37□□□□□ -0.27
DDB1-209ENST00000537877 HTTP42858 3142 aa13.37□□□□□ -0.27
DDB1-209ENST00000537877 GPR182O15218 404 aa13.37□□□□□ -0.27
DDB1-209ENST00000537877 TLR3O15455 904 aaKnown RBP13.37□□□□□ -0.27
DDB1-209ENST00000537877 NPTXRO95502 500 aa13.37□□□□□ -0.27
DDB1-209ENST00000537877 TFRCP02786 760 aaKnown RBP13.37□□□□□ -0.27
DDB1-209ENST00000537877 TNNI1P19237 187 aa13.37□□□□□ -0.27
DDB1-209ENST00000537877 PON1P27169 355 aa13.37□□□□□ -0.27
DDB1-209ENST00000537877 KRT9P35527 623 aa13.37□□□□□ -0.27
DDB1-209ENST00000537877 ENOX2Q16206 610 aaKnown RBP13.37□□□□□ -0.27
DDB1-209ENST00000537877 SEZ6Q53EL9 994 aa13.37□□□□□ -0.27
DDB1-209ENST00000537877 FBXO47Q5MNV8 452 aa13.37□□□□□ -0.27
DDB1-209ENST00000537877 TRIM65Q6PJ69 517 aa13.37□□□□□ -0.27
DDB1-209ENST00000537877 C15orf39Q6ZRI6 1047 aa13.37□□□□□ -0.27
DDB1-209ENST00000537877 CD302Q8IX05 232 aa13.37□□□□□ -0.27
DDB1-209ENST00000537877 CPLX3Q8WVH0 158 aa13.37□□□□□ -0.27
DDB1-209ENST00000537877 TRIM6Q9C030 488 aaPredicted RBP13.37□□□□□ -0.27
DDB1-209ENST00000537877 INTS2Q9H0H0 1204 aaKnown RBP13.37□□□□□ -0.27
DDB1-209ENST00000537877 TRPV6Q9H1D0 765 aa13.37□□□□□ -0.27
DDB1-209ENST00000537877 NUCKS1Q9H1E3 243 aaKnown RBP13.37□□□□□ -0.27
DDB1-209ENST00000537877 KCNF1Q9H3M0 494 aa13.37□□□□□ -0.27
DDB1-209ENST00000537877 ASB7Q9H672 318 aa13.37□□□□□ -0.27
DDB1-209ENST00000537877 CHST12Q9NRB3 414 aa13.37□□□□□ -0.27
DDB1-209ENST00000537877 TOPORSQ9NS56 1045 aaPredicted RBP13.37□□□□□ -0.27
DDB1-209ENST00000537877 ABHD10Q9NUJ1 306 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms