RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 PTPN14Q15678 1187 aa19.64■□□□□ 0.73
TNFRSF1A-209ENST00000536717 DCAF4L1Q3SXM0 396 aa19.64■□□□□ 0.73
TNFRSF1A-209ENST00000536717 ARSHQ5FYA8 562 aa19.64■□□□□ 0.73
TNFRSF1A-209ENST00000536717 LLGL2Q6P1M3 1020 aa19.64■□□□□ 0.73
TNFRSF1A-209ENST00000536717 RNF168Q8IYW5 571 aaPredicted RBP19.64■□□□□ 0.73
TNFRSF1A-209ENST00000536717 NTPCRQ9BSD7 190 aaKnown RBP19.64■□□□□ 0.73
TNFRSF1A-209ENST00000536717 NPHP3-ACAD11A0A0J9YXS1 232 aa19.63■□□□□ 0.73
TNFRSF1A-209ENST00000536717 PTGESO14684 152 aa19.63■□□□□ 0.73
TNFRSF1A-209ENST00000536717 SLC16A4O15374 487 aa19.63■□□□□ 0.73
TNFRSF1A-209ENST00000536717 YEATS4O95619 227 aa19.63■□□□□ 0.73
TNFRSF1A-209ENST00000536717 PLCG1P19174 1290 aa19.63■□□□□ 0.73
TNFRSF1A-209ENST00000536717 CACNB1Q02641 598 aaPredicted RBP19.63■□□□□ 0.73
TNFRSF1A-209ENST00000536717 GIT2Q14161 759 aa19.63■□□□□ 0.73
TNFRSF1A-209ENST00000536717 SLC39A14Q15043 492 aa19.63■□□□□ 0.73
TNFRSF1A-209ENST00000536717 ANKRD54Q6NXT1 300 aa19.63■□□□□ 0.73
TNFRSF1A-209ENST00000536717 SYCE2Q6PIF2 218 aa19.63■□□□□ 0.73
TNFRSF1A-209ENST00000536717 USP49Q70CQ1 688 aa19.63■□□□□ 0.73
TNFRSF1A-209ENST00000536717 ADHFE1Q8IWW8 467 aa19.63■□□□□ 0.73
TNFRSF1A-209ENST00000536717 RPS6KC1Q96S38 1066 aa19.63■□□□□ 0.73
TNFRSF1A-209ENST00000536717 ACO2Q99798 780 aaKnown RBP19.63■□□□□ 0.73
TNFRSF1A-209ENST00000536717 CCSER1Q9C0I3 900 aa19.63■□□□□ 0.73
TNFRSF1A-209ENST00000536717 PTPRHQ9HD43 1115 aa19.63■□□□□ 0.73
TNFRSF1A-209ENST00000536717 FBXO2Q9UK22 296 aaPredicted RBP19.63■□□□□ 0.73
TNFRSF1A-209ENST00000536717 TNFSF13BQ9Y275 285 aa19.63■□□□□ 0.73
TNFRSF1A-209ENST00000536717 C2orf16Q68DN1 1984 aa19.62■□□□□ 0.73
TNFRSF1A-209ENST00000536717 C19orf67A6NJJ6 358 aa19.62■□□□□ 0.73
TNFRSF1A-209ENST00000536717 SOD2P04179 222 aa19.62■□□□□ 0.73
TNFRSF1A-209ENST00000536717 PLS3P13797 630 aa19.62■□□□□ 0.73
TNFRSF1A-209ENST00000536717 SPECC1Q5M775 1068 aa19.62■□□□□ 0.73
TNFRSF1A-209ENST00000536717 LINC00301Q8NCQ3 95 aa19.62■□□□□ 0.73
TNFRSF1A-209ENST00000536717 SPIRE2Q8WWL2 714 aa19.62■□□□□ 0.73
TNFRSF1A-209ENST00000536717 EPSTI1Q96J88 318 aa19.62■□□□□ 0.73
TNFRSF1A-209ENST00000536717 CACNG4Q9UBN1 327 aa19.62■□□□□ 0.73
TNFRSF1A-209ENST00000536717 STK39Q9UEW8 545 aa19.62■□□□□ 0.73
TNFRSF1A-209ENST00000536717 USP15Q9Y4E8 981 aaPredicted RBP19.62■□□□□ 0.73
TNFRSF1A-209ENST00000536717 MORC2Q9Y6X9 1032 aaPredicted RBP19.62■□□□□ 0.73
TNFRSF1A-209ENST00000536717 MYO10Q9HD67 2058 aa19.62■□□□□ 0.73
TNFRSF1A-209ENST00000536717 SPTLC2O15270 562 aa19.61■□□□□ 0.73
TNFRSF1A-209ENST00000536717 LILRB3O75022 631 aa19.61■□□□□ 0.73
TNFRSF1A-209ENST00000536717 SRGAP2BP0DMP2 458 aa19.61■□□□□ 0.73
TNFRSF1A-209ENST00000536717 SSTR3P32745 418 aaPredicted RBP19.61■□□□□ 0.73
TNFRSF1A-209ENST00000536717 TAS1R1Q7RTX1 841 aa19.61■□□□□ 0.73
TNFRSF1A-209ENST00000536717 CEP120Q8N960 986 aa19.61■□□□□ 0.73
TNFRSF1A-209ENST00000536717 TMEM161BQ8NDZ6 487 aa19.61■□□□□ 0.73
TNFRSF1A-209ENST00000536717 SUSD6Q92537 303 aa19.61■□□□□ 0.73
TNFRSF1A-209ENST00000536717 RAD54LQ92698 747 aa19.61■□□□□ 0.73
TNFRSF1A-209ENST00000536717 CASP10Q92851 521 aa19.61■□□□□ 0.73
TNFRSF1A-209ENST00000536717 PAAF1Q9BRP4 392 aa19.61■□□□□ 0.73
TNFRSF1A-209ENST00000536717 TARS2Q9BW92 718 aaKnown RBP19.61■□□□□ 0.73
TNFRSF1A-209ENST00000536717 MRPL4Q9BYD3 311 aaKnown RBP19.61■□□□□ 0.73
TNFRSF1A-209ENST00000536717 S1PR5Q9H228 398 aa19.61■□□□□ 0.73
TNFRSF1A-209ENST00000536717 GDAQ9Y2T3 454 aa19.61■□□□□ 0.73
TNFRSF1A-209ENST00000536717 SRPRBQ9Y5M8 271 aaKnown RBP19.61■□□□□ 0.73
TNFRSF1A-209ENST00000536717 ABLIM1O14639 778 aa19.61■□□□□ 0.73
TNFRSF1A-209ENST00000536717 DHX8Q14562 1220 aaKnown RBP19.61■□□□□ 0.73
TNFRSF1A-209ENST00000536717 MCM6Q14566 821 aa19.61■□□□□ 0.73
TNFRSF1A-209ENST00000536717 NAB2Q15742 525 aa19.61■□□□□ 0.73
TNFRSF1A-209ENST00000536717 GPBP1Q86WP2 473 aa19.61■□□□□ 0.73
TNFRSF1A-209ENST00000536717 KCNG4Q8TDN1 519 aa19.61■□□□□ 0.73
TNFRSF1A-209ENST00000536717 RABGGTAQ92696 567 aa19.61■□□□□ 0.73
TNFRSF1A-209ENST00000536717 CLIC6Q96NY7 704 aa19.61■□□□□ 0.73
TNFRSF1A-209ENST00000536717 REEP2Q9BRK0 252 aa19.61■□□□□ 0.73
TNFRSF1A-209ENST00000536717 HERC2P3Q9BVR0 1158 aa19.61■□□□□ 0.73
TNFRSF1A-209ENST00000536717 SCAND2PQ9GZW5 306 aaPredicted RBP19.61■□□□□ 0.73
TNFRSF1A-209ENST00000536717 CDT1Q9H211 546 aa19.61■□□□□ 0.73
TNFRSF1A-209ENST00000536717 EPHX3Q9H6B9 360 aa19.61■□□□□ 0.73
TNFRSF1A-209ENST00000536717 PPP6R2O75170 966 aa19.6■□□□□ 0.73
TNFRSF1A-209ENST00000536717 NR1I2O75469 434 aa19.6■□□□□ 0.73
TNFRSF1A-209ENST00000536717 PROZP22891 400 aa19.6■□□□□ 0.73
TNFRSF1A-209ENST00000536717 TUSC3Q13454 348 aa19.6■□□□□ 0.73
TNFRSF1A-209ENST00000536717 RASSF8Q8NHQ8 419 aa19.6■□□□□ 0.73
TNFRSF1A-209ENST00000536717 SLC22A17Q8WUG5 538 aa19.6■□□□□ 0.73
TNFRSF1A-209ENST00000536717 COLEC11Q9BWP8 271 aa19.6■□□□□ 0.73
TNFRSF1A-209ENST00000536717 APOL5Q9BWW9 433 aa19.6■□□□□ 0.73
TNFRSF1A-209ENST00000536717 GPR62Q9BZJ7 368 aa19.6■□□□□ 0.73
TNFRSF1A-209ENST00000536717 KCNG1Q9UIX4 513 aa19.6■□□□□ 0.73
TNFRSF1A-209ENST00000536717 ODF2LQ9ULJ1 636 aa19.6■□□□□ 0.73
TNFRSF1A-209ENST00000536717 CASTOR2A6NHX0 329 aa19.59■□□□□ 0.73
TNFRSF1A-209ENST00000536717 THP07101 528 aa19.59■□□□□ 0.73
TNFRSF1A-209ENST00000536717 CNPP09543 421 aaKnown RBP19.59■□□□□ 0.73
TNFRSF1A-209ENST00000536717 MAPTP10636 758 aaKnown RBP19.59■□□□□ 0.73
TNFRSF1A-209ENST00000536717 EPCAMP16422 314 aa19.59■□□□□ 0.73
TNFRSF1A-209ENST00000536717 HOXB8P17481 243 aaPredicted RBP19.59■□□□□ 0.73
TNFRSF1A-209ENST00000536717 SMTNP53814 917 aa19.59■□□□□ 0.73
TNFRSF1A-209ENST00000536717 ZNF568Q3ZCX4 644 aa19.59■□□□□ 0.73
TNFRSF1A-209ENST00000536717 FUT10Q6P4F1 479 aa19.59■□□□□ 0.73
TNFRSF1A-209ENST00000536717 KRI1Q8N9T8 703 aaKnown RBP19.59■□□□□ 0.73
TNFRSF1A-209ENST00000536717 LARP4BQ92615 738 aaKnown RBP19.59■□□□□ 0.73
TNFRSF1A-209ENST00000536717 CHAMP1Q96JM3 812 aa19.59■□□□□ 0.73
TNFRSF1A-209ENST00000536717 SPATA32Q96LK8 384 aa19.59■□□□□ 0.73
TNFRSF1A-209ENST00000536717 KLHL5Q96PQ7 755 aa19.59■□□□□ 0.73
TNFRSF1A-209ENST00000536717 MRPL17Q9NRX2 175 aaKnown RBP19.59■□□□□ 0.73
TNFRSF1A-209ENST00000536717 LARSQ9P2J5 1176 aaKnown RBP19.59■□□□□ 0.73
TNFRSF1A-209ENST00000536717 RCOR1Q9UKL0 485 aa19.59■□□□□ 0.73
TNFRSF1A-209ENST00000536717 ADAM28Q9UKQ2 775 aa19.59■□□□□ 0.73
TNFRSF1A-209ENST00000536717 DENND4AQ7Z401 1863 aa19.59■□□□□ 0.73
TNFRSF1A-209ENST00000536717 DOCK6Q96HP0 2047 aa19.58■□□□□ 0.73
TNFRSF1A-209ENST00000536717 C2CD2LO14523 706 aa19.58■□□□□ 0.73
TNFRSF1A-209ENST00000536717 URODP06132 367 aa19.58■□□□□ 0.73
TNFRSF1A-209ENST00000536717 GRM5P41594 1212 aa19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms