RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 MORC4Q8TE76 937 aa14.13□□□□□ -0.15
LDLR-203ENST00000535915 PNMA2Q9UL42 364 aa14.13□□□□□ -0.15
LDLR-203ENST00000535915 NOVA2Q9UNW9 492 aaKnown RBP14.13□□□□□ -0.15
LDLR-203ENST00000535915 E7EVH7 732 aa14.13□□□□□ -0.15
LDLR-203ENST00000535915 HNRNPDLO14979 420 aaKnown RBP14.13□□□□□ -0.15
LDLR-203ENST00000535915 KIAA0391O15091 583 aaKnown RBP14.13□□□□□ -0.15
LDLR-203ENST00000535915 NR3C2P08235 984 aa14.13□□□□□ -0.15
LDLR-203ENST00000535915 PYGMP11217 842 aa14.13□□□□□ -0.15
LDLR-203ENST00000535915 CDR2Q01850 454 aa14.13□□□□□ -0.15
LDLR-203ENST00000535915 SP4Q02446 784 aa14.13□□□□□ -0.15
LDLR-203ENST00000535915 SLC39A4Q6P5W5 647 aa14.13□□□□□ -0.15
LDLR-203ENST00000535915 VSIG10LQ86VR7 867 aa14.13□□□□□ -0.15
LDLR-203ENST00000535915 RDM1Q8NG50 284 aa14.13□□□□□ -0.15
LDLR-203ENST00000535915 DHX38Q92620 1227 aaKnown RBP14.13□□□□□ -0.15
LDLR-203ENST00000535915 PPANQ9NQ55 473 aaKnown RBP14.13□□□□□ -0.15
LDLR-203ENST00000535915 UTRNP46939 3433 aa14.12□□□□□ -0.15
LDLR-203ENST00000535915 KRT5P13647 590 aa14.12□□□□□ -0.15
LDLR-203ENST00000535915 CTNNA2P26232 953 aa14.12□□□□□ -0.15
LDLR-203ENST00000535915 CCDC137Q6PK04 289 aaKnown RBP14.12□□□□□ -0.15
LDLR-203ENST00000535915 NLRP14Q86W24 1093 aa14.12□□□□□ -0.15
LDLR-203ENST00000535915 CPNE8Q86YQ8 564 aa14.12□□□□□ -0.15
LDLR-203ENST00000535915 GPATCH11Q8N954 259 aa14.12□□□□□ -0.15
LDLR-203ENST00000535915 TMC2Q8TDI7 906 aa14.12□□□□□ -0.15
LDLR-203ENST00000535915 ZNF473Q8WTR7 871 aaKnown RBP14.12□□□□□ -0.15
LDLR-203ENST00000535915 BICD1Q96G01 975 aa14.12□□□□□ -0.15
LDLR-203ENST00000535915 MFSD14AQ96MC6 490 aa14.12□□□□□ -0.15
LDLR-203ENST00000535915 NCAPGQ9BPX3 1015 aa14.12□□□□□ -0.15
LDLR-203ENST00000535915 TXLNGYQ9BZA5 131 aa14.12□□□□□ -0.15
LDLR-203ENST00000535915 GINM1Q9NU53 330 aa14.12□□□□□ -0.15
LDLR-203ENST00000535915 PHIPQ8WWQ0 1821 aa14.12□□□□□ -0.15
LDLR-203ENST00000535915 A0A087WUV0 522 aaPredicted RBP14.12□□□□□ -0.15
LDLR-203ENST00000535915 ZNF862O60290 1169 aa14.12□□□□□ -0.15
LDLR-203ENST00000535915 GGPS1O95749 300 aa14.12□□□□□ -0.15
LDLR-203ENST00000535915 CYP1A2P05177 515 aa14.12□□□□□ -0.15
LDLR-203ENST00000535915 PTGIRP43119 386 aa14.12□□□□□ -0.15
LDLR-203ENST00000535915 MCCD1P59942 119 aaPredicted RBP14.12□□□□□ -0.15
LDLR-203ENST00000535915 PPP2R2AP63151 447 aa14.12□□□□□ -0.15
LDLR-203ENST00000535915 CYP24A1Q07973 514 aa14.12□□□□□ -0.15
LDLR-203ENST00000535915 SV2AQ7L0J3 742 aa14.12□□□□□ -0.15
LDLR-203ENST00000535915 FBXO25Q8TCJ0 367 aa14.12□□□□□ -0.15
LDLR-203ENST00000535915 SPIRE2Q8WWL2 714 aa14.12□□□□□ -0.15
LDLR-203ENST00000535915 CD101Q93033 1021 aa14.12□□□□□ -0.15
LDLR-203ENST00000535915 ATP6V0A1Q93050 837 aa14.12□□□□□ -0.15
LDLR-203ENST00000535915 TATDN2Q93075 761 aa14.12□□□□□ -0.15
LDLR-203ENST00000535915 GPRASP2Q96D09 838 aa14.12□□□□□ -0.15
LDLR-203ENST00000535915 CCT8L2Q96SF2 557 aa14.12□□□□□ -0.15
LDLR-203ENST00000535915 NTPCRQ9BSD7 190 aaKnown RBP14.12□□□□□ -0.15
LDLR-203ENST00000535915 C17orf75Q9HAS0 396 aa14.12□□□□□ -0.15
LDLR-203ENST00000535915 GTF3C4Q9UKN8 822 aa14.12□□□□□ -0.15
LDLR-203ENST00000535915 ADGRA3Q8IWK6 1321 aa14.12□□□□□ -0.15
LDLR-203ENST00000535915 PODXLO00592 558 aa14.11□□□□□ -0.15
LDLR-203ENST00000535915 FDX1P10109 184 aa14.11□□□□□ -0.15
LDLR-203ENST00000535915 PMS2P54278 862 aa14.11□□□□□ -0.15
LDLR-203ENST00000535915 DRG2P55039 364 aaKnown RBP14.11□□□□□ -0.15
LDLR-203ENST00000535915 EIF3BP55884 814 aaKnown RBP14.11□□□□□ -0.15
LDLR-203ENST00000535915 MAGOHP61326 146 aaKnown RBP14.11□□□□□ -0.15
LDLR-203ENST00000535915 SPDYCQ5MJ68 293 aa14.11□□□□□ -0.15
LDLR-203ENST00000535915 SNRNP48Q6IEG0 339 aaKnown RBP14.11□□□□□ -0.15
LDLR-203ENST00000535915 SWSAP1Q6NVH7 229 aa14.11□□□□□ -0.15
LDLR-203ENST00000535915 XRRA1Q6P2D8 792 aa14.11□□□□□ -0.15
LDLR-203ENST00000535915 TTC27Q6P3X3 843 aa14.11□□□□□ -0.15
LDLR-203ENST00000535915 TADA2BQ86TJ2 420 aa14.11□□□□□ -0.15
LDLR-203ENST00000535915 ZDHHC14Q8IZN3 488 aa14.11□□□□□ -0.15
LDLR-203ENST00000535915 GPD1LQ8N335 351 aa14.11□□□□□ -0.15
LDLR-203ENST00000535915 MYCBPAPQ8TBZ2 947 aa14.11□□□□□ -0.15
LDLR-203ENST00000535915 FBXL18Q96ME1 805 aa14.11□□□□□ -0.15
LDLR-203ENST00000535915 PI4K2AQ9BTU6 479 aa14.11□□□□□ -0.15
LDLR-203ENST00000535915 SEPT9Q9UHD8 586 aaPredicted RBP14.11□□□□□ -0.15
LDLR-203ENST00000535915 PCYOX1Q9UHG3 505 aa14.11□□□□□ -0.15
LDLR-203ENST00000535915 SLC12A6Q9UHW9 1150 aa14.11□□□□□ -0.15
LDLR-203ENST00000535915 MTUS1Q9ULD2 1270 aa14.11□□□□□ -0.15
LDLR-203ENST00000535915 RLFQ13129 1914 aa14.11□□□□□ -0.15
LDLR-203ENST00000535915 DCDC2CA8MYV0 355 aa14.11□□□□□ -0.15
LDLR-203ENST00000535915 ZDHHC24Q6UX98 284 aa14.11□□□□□ -0.15
LDLR-203ENST00000535915 SENP7Q9BQF6 1050 aa14.11□□□□□ -0.15
LDLR-203ENST00000535915 FAM213AQ9BRX8 229 aa14.11□□□□□ -0.15
LDLR-203ENST00000535915 LRRC4CQ9HCJ2 640 aa14.11□□□□□ -0.15
LDLR-203ENST00000535915 UVRAGQ9P2Y5 699 aa14.11□□□□□ -0.15
LDLR-203ENST00000535915 PCDHA3Q9Y5H8 950 aa14.11□□□□□ -0.15
LDLR-203ENST00000535915 TCRBV7S2A1N4TA0A589 114 aa14.11□□□□□ -0.15
LDLR-203ENST00000535915 MAFGO15525 162 aa14.11□□□□□ -0.15
LDLR-203ENST00000535915 SORBS3O60504 671 aa14.11□□□□□ -0.15
LDLR-203ENST00000535915 DKC1O60832 514 aaKnown RBP eCLIP14.11□□□□□ -0.15
LDLR-203ENST00000535915 TMOD1P28289 359 aa14.11□□□□□ -0.15
LDLR-203ENST00000535915 GTF2H1P32780 548 aa14.11□□□□□ -0.15
LDLR-203ENST00000535915 RPL21P46778 160 aaKnown RBP14.11□□□□□ -0.15
LDLR-203ENST00000535915 ACAD10Q6JQN1 1059 aa14.11□□□□□ -0.15
LDLR-203ENST00000535915 SLC13A5Q86YT5 568 aaPredicted RBP14.11□□□□□ -0.15
LDLR-203ENST00000535915 CCDC105Q8IYK2 499 aa14.11□□□□□ -0.15
LDLR-203ENST00000535915 MICALL1Q8N3F8 863 aa14.11□□□□□ -0.15
LDLR-203ENST00000535915 PABPC3Q9H361 631 aaKnown RBP14.11□□□□□ -0.15
LDLR-203ENST00000535915 CNOT8Q9UFF9 292 aaKnown RBP14.11□□□□□ -0.15
LDLR-203ENST00000535915 PTPN22Q9Y2R2 807 aa14.11□□□□□ -0.15
LDLR-203ENST00000535915 DGAT1O75907 488 aa14.1□□□□□ -0.15
LDLR-203ENST00000535915 FAM107AO95990 144 aa14.1□□□□□ -0.15
LDLR-203ENST00000535915 PSAPP07602 524 aa14.1□□□□□ -0.15
LDLR-203ENST00000535915 KCNA2P16389 499 aa14.1□□□□□ -0.15
LDLR-203ENST00000535915 LIG3P49916 1009 aa14.1□□□□□ -0.15
LDLR-203ENST00000535915 BACE1P56817 501 aa14.1□□□□□ -0.15
LDLR-203ENST00000535915 RWDD2BP57060 319 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms