RNA–Protein interactions for RNA: ENST00000534556.1

USH1C-210, Transcript of USH1 protein network component harmonin, humanhuman

TSL 3

Gene USH1C, Length 244 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-210ENST00000534556 TLE6Q9H808 572 aa5.58□□□□□ -1.52
USH1C-210ENST00000534556 GOLGA2P5Q9HBQ8 144 aa5.58□□□□□ -1.52
USH1C-210ENST00000534556 C11orf16Q9NQ32 467 aa5.58□□□□□ -1.52
USH1C-210ENST00000534556 PRMT7Q9NVM4 692 aaPredicted RBP5.58□□□□□ -1.52
USH1C-210ENST00000534556 LZTS1Q9Y250 596 aa5.58□□□□□ -1.52
USH1C-210ENST00000534556 GDAQ9Y2T3 454 aa5.58□□□□□ -1.52
USH1C-210ENST00000534556 GIT1Q9Y2X7 761 aa5.58□□□□□ -1.52
USH1C-210ENST00000534556 PRG3Q9Y2Y8 225 aaPredicted RBP5.58□□□□□ -1.52
USH1C-210ENST00000534556 MORC2Q9Y6X9 1032 aaPredicted RBP5.58□□□□□ -1.52
USH1C-210ENST00000534556 PHLPP2Q6ZVD8 1323 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 CASTOR2A6NHX0 329 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 C19orf67A6NJJ6 358 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 I3L4J1 428 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 K7ERI5 159 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 N4BP3O15049 544 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 ADAM12O43184 909 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 PPP1R37O75864 691 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 CXCL14O95715 111 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 F13A1P00488 732 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 CNPP09543 421 aaKnown RBP5.57□□□□□ -1.52
USH1C-210ENST00000534556 WEE2P0C1S8 567 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 MYBP10242 640 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 CTSAP10619 480 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 SKIP12755 728 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 PLS3P13797 630 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 PDCP20941 246 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 HOXD13P35453 343 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 DDIT3P35638 169 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 UBA7P41226 1012 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 TNFSF9P41273 254 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 OSTNP61366 133 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 DNM1Q05193 864 aaKnown RBP5.57□□□□□ -1.52
USH1C-210ENST00000534556 RNASELQ05823 741 aaKnown RBP5.57□□□□□ -1.52
USH1C-210ENST00000534556 PCBP1Q15365 356 aaKnown RBP eCLIP5.57□□□□□ -1.52
USH1C-210ENST00000534556 PTPN14Q15678 1187 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 MAPK6Q16659 721 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 SLC10A6Q3KNW5 377 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 KIAA0319Q5VV43 1072 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 LLGL2Q6P1M3 1020 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 POTEHQ6S545 545 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 RSPO2Q6UXX9 243 aaPredicted RBP5.57□□□□□ -1.52
USH1C-210ENST00000534556 TMEM184AQ6ZMB5 413 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 EP400NLQ6ZTU2 488 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 DYMQ7RTS9 669 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 TMC7Q7Z402 723 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 ZBTB33Q86T24 672 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 DDX53Q86TM3 631 aaKnown RBP5.57□□□□□ -1.52
USH1C-210ENST00000534556 ZBTB8OSQ8IWT0 167 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 SMRP1Q8NCR6 262 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 DEPTORQ8TB45 409 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 HASPINQ8TF76 798 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 SPIRE2Q8WWL2 714 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 SUSD6Q92537 303 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 LARP4BQ92615 738 aaKnown RBP5.57□□□□□ -1.52
USH1C-210ENST00000534556 KCNN1Q92952 543 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 HPS3Q969F9 1004 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 C18orf25Q96B23 403 aaPredicted RBP5.57□□□□□ -1.52
USH1C-210ENST00000534556 PGBD4Q96DM1 585 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 IFT74Q96LB3 600 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 PPP1R10Q96QC0 940 aaKnown RBP5.57□□□□□ -1.52
USH1C-210ENST00000534556 UHRF1Q96T88 793 aaPredicted RBP5.57□□□□□ -1.52
USH1C-210ENST00000534556 MRPL9Q9BYD2 267 aaKnown RBP5.57□□□□□ -1.52
USH1C-210ENST00000534556 RAB34Q9BZG1 259 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 NT5C3AQ9H0P0 336 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 C2orf40Q9H1Z8 148 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 EPHX3Q9H6B9 360 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 KMT5AQ9NQR1 393 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 AAASQ9NRG9 546 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 CHST7Q9NS84 486 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 DAXXQ9UER7 740 aaPredicted RBP5.57□□□□□ -1.52
USH1C-210ENST00000534556 PARP2Q9UGN5 583 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 RAPGEFL1Q9UHV5 662 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 TNFSF13BQ9Y275 285 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 FAN1Q9Y2M0 1017 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 HCFC2Q9Y5Z7 792 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 ZDBF2Q9HCK1 2354 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 COL4A2P08572 1712 aa5.57□□□□□ -1.52
USH1C-210ENST00000534556 PIEZO1Q92508 2521 aa5.56□□□□□ -1.52
USH1C-210ENST00000534556 SMIM28A0A1B0GU29 152 aa5.56□□□□□ -1.52
USH1C-210ENST00000534556 FRMD3A2A2Y4 597 aa5.56□□□□□ -1.52
USH1C-210ENST00000534556 TNFRSF10AO00220 468 aa5.56□□□□□ -1.52
USH1C-210ENST00000534556 NRG2O14511 850 aaPredicted RBP5.56□□□□□ -1.52
USH1C-210ENST00000534556 C2CD2LO14523 706 aa5.56□□□□□ -1.52
USH1C-210ENST00000534556 PPEF2O14830 753 aa5.56□□□□□ -1.52
USH1C-210ENST00000534556 SPTLC2O15270 562 aa5.56□□□□□ -1.52
USH1C-210ENST00000534556 SLC26A4O43511 780 aa5.56□□□□□ -1.52
USH1C-210ENST00000534556 KIF4AO95239 1232 aa5.56□□□□□ -1.52
USH1C-210ENST00000534556 BRD1O95696 1058 aa5.56□□□□□ -1.52
USH1C-210ENST00000534556 ALDH2P05091 517 aa5.56□□□□□ -1.52
USH1C-210ENST00000534556 RPL17P18621 184 aaKnown RBP5.56□□□□□ -1.52
USH1C-210ENST00000534556 ADSSP30520 456 aa5.56□□□□□ -1.52
USH1C-210ENST00000534556 PPM1AP35813 382 aa5.56□□□□□ -1.52
USH1C-210ENST00000534556 GRM5P41594 1212 aa5.56□□□□□ -1.52
USH1C-210ENST00000534556 OR1G1P47890 313 aa5.56□□□□□ -1.52
USH1C-210ENST00000534556 ALDH7A1P49419 539 aaKnown RBP5.56□□□□□ -1.52
USH1C-210ENST00000534556 CLCNKBP51801 687 aa5.56□□□□□ -1.52
USH1C-210ENST00000534556 GUCY2FP51841 1108 aa5.56□□□□□ -1.52
USH1C-210ENST00000534556 EFNA5P52803 228 aa5.56□□□□□ -1.52
USH1C-210ENST00000534556 ZP2Q05996 745 aa5.56□□□□□ -1.52
USH1C-210ENST00000534556 SPAG1Q07617 926 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms