RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 RCN2Q14257 317 aa20.51■□□□□ 0.87
SMPD1-210ENST00000534405 RPS6KA1Q15418 735 aa20.51■□□□□ 0.87
SMPD1-210ENST00000534405 C6orf118Q5T5N4 469 aa20.51■□□□□ 0.87
SMPD1-210ENST00000534405 EPM2AIP1Q7L775 607 aaPredicted RBP20.51■□□□□ 0.87
SMPD1-210ENST00000534405 CCNJLQ8IV13 435 aa20.51■□□□□ 0.87
SMPD1-210ENST00000534405 SYT2Q8N9I0 419 aaPredicted RBP20.51■□□□□ 0.87
SMPD1-210ENST00000534405 ANKLE1Q8NAG6 615 aa20.51■□□□□ 0.87
SMPD1-210ENST00000534405 SUPT20HQ8NEM7 779 aa20.51■□□□□ 0.87
SMPD1-210ENST00000534405 FMO2Q99518 471 aa20.51■□□□□ 0.87
SMPD1-210ENST00000534405 IDI2Q9BXS1 227 aa20.51■□□□□ 0.87
SMPD1-210ENST00000534405 DDX47Q9H0S4 455 aaKnown RBP20.51■□□□□ 0.87
SMPD1-210ENST00000534405 CARD9Q9H257 536 aa20.51■□□□□ 0.87
SMPD1-210ENST00000534405 TRPC5Q9UL62 973 aaPredicted RBP20.51■□□□□ 0.87
SMPD1-210ENST00000534405 TCP11X1B4DZS4 312 aa20.5■□□□□ 0.87
SMPD1-210ENST00000534405 SLC26A4O43511 780 aa20.5■□□□□ 0.87
SMPD1-210ENST00000534405 TMCC1O94876 653 aa20.5■□□□□ 0.87
SMPD1-210ENST00000534405 VHLP40337 213 aa20.5■□□□□ 0.87
SMPD1-210ENST00000534405 SH3BGRP55822 239 aaPredicted RBP20.5■□□□□ 0.87
SMPD1-210ENST00000534405 BPIFB4P59827 614 aa20.5■□□□□ 0.87
SMPD1-210ENST00000534405 TNFAIP8L3Q5GJ75 292 aa20.5■□□□□ 0.87
SMPD1-210ENST00000534405 SLC30A10Q6XR72 485 aa20.5■□□□□ 0.87
SMPD1-210ENST00000534405 PPP4R3CPQ6ZMV5 832 aa20.5■□□□□ 0.87
SMPD1-210ENST00000534405 PODNQ7Z5L7 613 aa20.5■□□□□ 0.87
SMPD1-210ENST00000534405 RMDN2Q96LZ7 410 aa20.5■□□□□ 0.87
SMPD1-210ENST00000534405 PABPC3Q9H361 631 aaKnown RBP20.5■□□□□ 0.87
SMPD1-210ENST00000534405 TRAF3IP3Q9Y228 551 aa20.5■□□□□ 0.87
SMPD1-210ENST00000534405 BZW2Q9Y6E2 419 aaKnown RBP20.5■□□□□ 0.87
SMPD1-210ENST00000534405 PGRMC1O00264 195 aaKnown RBP20.49■□□□□ 0.87
SMPD1-210ENST00000534405 MSH4O15457 936 aa20.49■□□□□ 0.87
SMPD1-210ENST00000534405 POLD1P28340 1107 aa20.49■□□□□ 0.87
SMPD1-210ENST00000534405 SREBF1P36956 1147 aa20.49■□□□□ 0.87
SMPD1-210ENST00000534405 OCRLQ01968 901 aa20.49■□□□□ 0.87
SMPD1-210ENST00000534405 MPP3Q13368 585 aa20.49■□□□□ 0.87
SMPD1-210ENST00000534405 KNOP1Q1ED39 458 aaKnown RBP20.49■□□□□ 0.87
SMPD1-210ENST00000534405 FBXO11Q86XK2 927 aa20.49■□□□□ 0.87
SMPD1-210ENST00000534405 DNAAF5Q86Y56 855 aa20.49■□□□□ 0.87
SMPD1-210ENST00000534405 PROCA1Q8NCQ7 364 aaPredicted RBP20.49■□□□□ 0.87
SMPD1-210ENST00000534405 NEK9Q8TD19 979 aa20.49■□□□□ 0.87
SMPD1-210ENST00000534405 SPATA16Q9BXB7 569 aa20.49■□□□□ 0.87
SMPD1-210ENST00000534405 DPH5Q9H2P9 285 aa20.49■□□□□ 0.87
SMPD1-210ENST00000534405 DNM3Q9UQ16 869 aa20.49■□□□□ 0.87
SMPD1-210ENST00000534405 USP20Q9Y2K6 914 aa20.49■□□□□ 0.87
SMPD1-210ENST00000534405 COMMD3-BMI1R4GMX3 469 aa20.49■□□□□ 0.87
SMPD1-210ENST00000534405 ECE2O60344 883 aa20.49■□□□□ 0.87
SMPD1-210ENST00000534405 ATP9AO75110 1047 aa20.49■□□□□ 0.87
SMPD1-210ENST00000534405 EPS15P42566 896 aa20.49■□□□□ 0.87
SMPD1-210ENST00000534405 RRP1BQ14684 758 aaKnown RBP20.49■□□□□ 0.87
SMPD1-210ENST00000534405 ASIC2Q16515 512 aa20.49■□□□□ 0.87
SMPD1-210ENST00000534405 DACT2Q5SW24 774 aa20.49■□□□□ 0.87
SMPD1-210ENST00000534405 ZNF365Q70YC5 407 aa20.49■□□□□ 0.87
SMPD1-210ENST00000534405 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.49■□□□□ 0.87
SMPD1-210ENST00000534405 RUSC1Q9BVN2 902 aa20.49■□□□□ 0.87
SMPD1-210ENST00000534405 AP1M1Q9BXS5 423 aa20.49■□□□□ 0.87
SMPD1-210ENST00000534405 PPP1R12CQ9BZL4 782 aa20.49■□□□□ 0.87
SMPD1-210ENST00000534405 DCLRE1BQ9H816 532 aa20.49■□□□□ 0.87
SMPD1-210ENST00000534405 STOML1Q9UBI4 398 aa20.49■□□□□ 0.87
SMPD1-210ENST00000534405 AMACRQ9UHK6 382 aa20.49■□□□□ 0.87
SMPD1-210ENST00000534405 VAV3Q9UKW4 847 aa20.49■□□□□ 0.87
SMPD1-210ENST00000534405 TMEM221A6NGB7 291 aa20.48■□□□□ 0.87
SMPD1-210ENST00000534405 TBX3O15119 743 aa20.48■□□□□ 0.87
SMPD1-210ENST00000534405 USP46P62068 366 aa20.48■□□□□ 0.87
SMPD1-210ENST00000534405 KCNA1Q09470 495 aa20.48■□□□□ 0.87
SMPD1-210ENST00000534405 IKQ13123 557 aaPredicted RBP20.48■□□□□ 0.87
SMPD1-210ENST00000534405 TMEM179Q6ZVK1 233 aa20.48■□□□□ 0.87
SMPD1-210ENST00000534405 STKLD1Q8NE28 680 aa20.48■□□□□ 0.87
SMPD1-210ENST00000534405 INPP5DQ92835 1189 aa20.48■□□□□ 0.87
SMPD1-210ENST00000534405 CCDC28BQ9BUN5 200 aa20.48■□□□□ 0.87
SMPD1-210ENST00000534405 TMEM109Q9BVC6 243 aa20.48■□□□□ 0.87
SMPD1-210ENST00000534405 STMN4Q9H169 189 aaPredicted RBP20.48■□□□□ 0.87
SMPD1-210ENST00000534405 UTP11Q9Y3A2 253 aaKnown RBP20.48■□□□□ 0.87
SMPD1-210ENST00000534405 EML1O00423 815 aa20.48■□□□□ 0.87
SMPD1-210ENST00000534405 CEP104O60308 925 aa20.48■□□□□ 0.87
SMPD1-210ENST00000534405 AKAP3O75969 853 aa20.48■□□□□ 0.87
SMPD1-210ENST00000534405 PTK2Q05397 1052 aa20.48■□□□□ 0.87
SMPD1-210ENST00000534405 RNASELQ05823 741 aaKnown RBP20.48■□□□□ 0.87
SMPD1-210ENST00000534405 MGAT5Q09328 741 aa20.48■□□□□ 0.87
SMPD1-210ENST00000534405 ACVR2BQ13705 512 aa20.48■□□□□ 0.87
SMPD1-210ENST00000534405 ABCB5Q2M3G0 1257 aa20.48■□□□□ 0.87
SMPD1-210ENST00000534405 SYDE2Q5VT97 1194 aa20.48■□□□□ 0.87
SMPD1-210ENST00000534405 DENND2CQ68D51 928 aa20.48■□□□□ 0.87
SMPD1-210ENST00000534405 IRF2BP2Q7Z5L9 587 aa20.48■□□□□ 0.87
SMPD1-210ENST00000534405 BHMT2Q9H2M3 363 aa20.48■□□□□ 0.87
SMPD1-210ENST00000534405 IKZF4Q9H2S9 585 aa20.48■□□□□ 0.87
SMPD1-210ENST00000534405 TLDC2A0PJX2 215 aa20.47■□□□□ 0.87
SMPD1-210ENST00000534405 TTI1O43156 1089 aa20.47■□□□□ 0.87
SMPD1-210ENST00000534405 EIF4BP23588 611 aaKnown RBP20.47■□□□□ 0.87
SMPD1-210ENST00000534405 CASP4P49662 377 aa20.47■□□□□ 0.87
SMPD1-210ENST00000534405 PMS2P54278 862 aa20.47■□□□□ 0.87
SMPD1-210ENST00000534405 ZNF571Q7Z3V5 609 aaPredicted RBP20.47■□□□□ 0.87
SMPD1-210ENST00000534405 GMCL1P1Q8NEA9 526 aa20.47■□□□□ 0.87
SMPD1-210ENST00000534405 ERMNQ8TAM6 284 aa20.47■□□□□ 0.87
SMPD1-210ENST00000534405 FBXO41Q8TF61 875 aa20.47■□□□□ 0.87
SMPD1-210ENST00000534405 MASTLQ96GX5 879 aa20.47■□□□□ 0.87
SMPD1-210ENST00000534405 ARMCX3Q9UH62 379 aaPredicted RBP20.47■□□□□ 0.87
SMPD1-210ENST00000534405 AJAP1Q9UKB5 411 aaPredicted RBP20.47■□□□□ 0.87
SMPD1-210ENST00000534405 NOC2LQ9Y3T9 749 aaKnown RBP20.47■□□□□ 0.87
SMPD1-210ENST00000534405 ASTN1O14525 1302 aa20.47■□□□□ 0.87
SMPD1-210ENST00000534405 A0A1W2PRG0 241 aa20.47■□□□□ 0.87
SMPD1-210ENST00000534405 ZBTB48P10074 688 aaPredicted RBP20.47■□□□□ 0.87
SMPD1-210ENST00000534405 UCHL3P15374 230 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms