RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 STRBPQ96SI9 672 aaKnown RBP4.35□□□□□ -1.71
CSMD3-210ENST00000534172 SLC12A5Q9H2X9 1139 aa4.35□□□□□ -1.71
CSMD3-210ENST00000534172 PARD6AQ9NPB6 346 aa4.35□□□□□ -1.71
CSMD3-210ENST00000534172 MAN1C1Q9NR34 630 aa4.35□□□□□ -1.71
CSMD3-210ENST00000534172 PBRM1Q86U86 1689 aa4.35□□□□□ -1.71
CSMD3-210ENST00000534172 TTC37Q6PGP7 1564 aa4.35□□□□□ -1.71
CSMD3-210ENST00000534172 ANO9A1A5B4 782 aa4.35□□□□□ -1.71
CSMD3-210ENST00000534172 LAMTOR5O43504 91 aa4.35□□□□□ -1.71
CSMD3-210ENST00000534172 B4GALT4O60513 344 aa4.35□□□□□ -1.71
CSMD3-210ENST00000534172 DTNBO60941 627 aa4.35□□□□□ -1.71
CSMD3-210ENST00000534172 GYPEP15421 78 aa4.35□□□□□ -1.71
CSMD3-210ENST00000534172 HTR3AP46098 478 aa4.35□□□□□ -1.71
CSMD3-210ENST00000534172 CDK17Q00537 523 aa4.35□□□□□ -1.71
CSMD3-210ENST00000534172 ADAM15Q13444 863 aa4.35□□□□□ -1.71
CSMD3-210ENST00000534172 MORC1Q86VD1 984 aa4.35□□□□□ -1.71
CSMD3-210ENST00000534172 MIER2Q8N344 545 aa4.35□□□□□ -1.71
CSMD3-210ENST00000534172 RUNDC1Q96C34 613 aa4.35□□□□□ -1.71
CSMD3-210ENST00000534172 CYFIP2Q96F07 1278 aa4.35□□□□□ -1.71
CSMD3-210ENST00000534172 MANSC1Q9H8J5 431 aa4.35□□□□□ -1.71
CSMD3-210ENST00000534172 EVLQ9UI08 416 aaPredicted RBP4.35□□□□□ -1.71
CSMD3-210ENST00000534172 WDHD1O75717 1129 aaPredicted RBP4.34□□□□□ -1.71
CSMD3-210ENST00000534172 ALDH1A2O94788 518 aa4.34□□□□□ -1.71
CSMD3-210ENST00000534172 ZNF888P0CJ79 500 aaPredicted RBP4.34□□□□□ -1.71
CSMD3-210ENST00000534172 ADCY7P51828 1080 aa4.34□□□□□ -1.71
CSMD3-210ENST00000534172 RRADP55042 308 aa4.34□□□□□ -1.71
CSMD3-210ENST00000534172 GRAMD1BQ3KR37 738 aa4.34□□□□□ -1.71
CSMD3-210ENST00000534172 TSPEARQ8WU66 669 aa4.34□□□□□ -1.71
CSMD3-210ENST00000534172 ZNF480Q8WV37 535 aa4.34□□□□□ -1.71
CSMD3-210ENST00000534172 TTC17Q96AE7 1141 aa4.34□□□□□ -1.71
CSMD3-210ENST00000534172 TEKT5Q96M29 485 aa4.34□□□□□ -1.71
CSMD3-210ENST00000534172 PPCSQ9HAB8 311 aa4.34□□□□□ -1.71
CSMD3-210ENST00000534172 NMRK2Q9NPI5 230 aa4.34□□□□□ -1.71
CSMD3-210ENST00000534172 GNL3LQ9NVN8 582 aaKnown RBP4.34□□□□□ -1.71
CSMD3-210ENST00000534172 CLCA2Q9UQC9 943 aa4.34□□□□□ -1.71
CSMD3-210ENST00000534172 MROH2BQ7Z745 1585 aa4.34□□□□□ -1.71
CSMD3-210ENST00000534172 SLC26A4O43511 780 aa4.34□□□□□ -1.72
CSMD3-210ENST00000534172 B4GALT3O60512 393 aa4.34□□□□□ -1.72
CSMD3-210ENST00000534172 PLATP00750 562 aa4.34□□□□□ -1.72
CSMD3-210ENST00000534172 SERPINB3P29508 390 aa4.34□□□□□ -1.72
CSMD3-210ENST00000534172 HSPA1LP34931 641 aa4.34□□□□□ -1.72
CSMD3-210ENST00000534172 CRHR1P34998 444 aa4.34□□□□□ -1.72
CSMD3-210ENST00000534172 MCAMP43121 646 aa4.34□□□□□ -1.72
CSMD3-210ENST00000534172 BPIFB4P59827 614 aa4.34□□□□□ -1.72
CSMD3-210ENST00000534172 CD69Q07108 199 aa4.34□□□□□ -1.72
CSMD3-210ENST00000534172 UBXN11Q5T124 520 aa4.34□□□□□ -1.72
CSMD3-210ENST00000534172 B3GNT9Q6UX72 402 aa4.34□□□□□ -1.72
CSMD3-210ENST00000534172 THEMISQ8N1K5 641 aaPredicted RBP4.34□□□□□ -1.72
CSMD3-210ENST00000534172 SLC35G2Q8TBE7 412 aa4.34□□□□□ -1.72
CSMD3-210ENST00000534172 JADE3Q92613 823 aa4.34□□□□□ -1.72
CSMD3-210ENST00000534172 NEIL1Q96FI4 390 aaPredicted RBP4.34□□□□□ -1.72
CSMD3-210ENST00000534172 ELAC2Q9BQ52 826 aaKnown RBP4.34□□□□□ -1.72
CSMD3-210ENST00000534172 DDX21Q9NR30 783 aaKnown RBP eCLIP4.34□□□□□ -1.72
CSMD3-210ENST00000534172 RBM8AQ9Y5S9 174 aaKnown RBP4.34□□□□□ -1.72
CSMD3-210ENST00000534172 C2orf78A6NCI8 922 aa4.33□□□□□ -1.72
CSMD3-210ENST00000534172 NPEPPSL1A6NEC2 478 aa4.33□□□□□ -1.72
CSMD3-210ENST00000534172 TEX33O43247 280 aa4.33□□□□□ -1.72
CSMD3-210ENST00000534172 NDUFS2O75306 463 aa4.33□□□□□ -1.72
CSMD3-210ENST00000534172 CNOT4O95628 575 aaKnown RBP4.33□□□□□ -1.72
CSMD3-210ENST00000534172 CELA3BP08861 270 aa4.33□□□□□ -1.72
CSMD3-210ENST00000534172 HNRNPLP14866 589 aaKnown RBP eCLIP4.33□□□□□ -1.72
CSMD3-210ENST00000534172 HSPA6P17066 643 aa4.33□□□□□ -1.72
CSMD3-210ENST00000534172 DEKP35659 375 aaKnown RBP4.33□□□□□ -1.72
CSMD3-210ENST00000534172 HSPA2P54652 639 aa4.33□□□□□ -1.72
CSMD3-210ENST00000534172 HGFACQ04756 655 aa4.33□□□□□ -1.72
CSMD3-210ENST00000534172 DUSP2Q05923 314 aa4.33□□□□□ -1.72
CSMD3-210ENST00000534172 MGAT2Q10469 447 aa4.33□□□□□ -1.72
CSMD3-210ENST00000534172 RRP12Q5JTH9 1297 aaKnown RBP4.33□□□□□ -1.72
CSMD3-210ENST00000534172 FAM83BQ5T0W9 1011 aa4.33□□□□□ -1.72
CSMD3-210ENST00000534172 IFIT1BQ5T764 474 aaKnown RBP4.33□□□□□ -1.72
CSMD3-210ENST00000534172 THEMIS2Q5TEJ8 643 aa4.33□□□□□ -1.72
CSMD3-210ENST00000534172 MIGA2Q7L4E1 593 aa4.33□□□□□ -1.72
CSMD3-210ENST00000534172 GPR155Q7Z3F1 870 aa4.33□□□□□ -1.72
CSMD3-210ENST00000534172 CMTM4Q8IZR5 234 aa4.33□□□□□ -1.72
CSMD3-210ENST00000534172 GLB1L3Q8NCI6 653 aaPredicted RBP4.33□□□□□ -1.72
CSMD3-210ENST00000534172 HDAC10Q969S8 669 aa4.33□□□□□ -1.72
CSMD3-210ENST00000534172 LMF1Q96S06 567 aa4.33□□□□□ -1.72
CSMD3-210ENST00000534172 MPHOSPH9Q99550 1183 aa4.33□□□□□ -1.72
CSMD3-210ENST00000534172 FDXACB1Q9BRP7 624 aaPredicted RBP4.33□□□□□ -1.72
CSMD3-210ENST00000534172 C12orf65Q9H3J6 166 aaKnown RBP4.33□□□□□ -1.72
CSMD3-210ENST00000534172 SCOCQ9UIL1 159 aa4.33□□□□□ -1.72
CSMD3-210ENST00000534172 MAGEL2Q9UJ55 1249 aa4.33□□□□□ -1.72
CSMD3-210ENST00000534172 CFAP20Q9Y6A4 193 aaKnown RBP4.33□□□□□ -1.72
CSMD3-210ENST00000534172 PMM2O15305 246 aa4.33□□□□□ -1.72
CSMD3-210ENST00000534172 AP1G1O43747 822 aa4.33□□□□□ -1.72
CSMD3-210ENST00000534172 PRAMEF4O60810 478 aa4.33□□□□□ -1.72
CSMD3-210ENST00000534172 CR2P20023 1033 aa4.33□□□□□ -1.72
CSMD3-210ENST00000534172 CTSSP25774 331 aa4.33□□□□□ -1.72
CSMD3-210ENST00000534172 ECHS1P30084 290 aa4.33□□□□□ -1.72
CSMD3-210ENST00000534172 NPEPPSP55786 919 aa4.33□□□□□ -1.72
CSMD3-210ENST00000534172 UBE3CQ15386 1083 aa4.33□□□□□ -1.72
CSMD3-210ENST00000534172 INO80DQ53TQ3 878 aaPredicted RBP4.33□□□□□ -1.72
CSMD3-210ENST00000534172 MFSD5Q6N075 450 aa4.33□□□□□ -1.72
CSMD3-210ENST00000534172 ERAP2Q6P179 960 aa4.33□□□□□ -1.72
CSMD3-210ENST00000534172 CLEC4GQ6UXB4 293 aa4.33□□□□□ -1.72
CSMD3-210ENST00000534172 FAM9BQ8IZU0 186 aa4.33□□□□□ -1.72
CSMD3-210ENST00000534172 RIN2Q8WYP3 895 aaPredicted RBP4.33□□□□□ -1.72
CSMD3-210ENST00000534172 TAAR9Q96RI9 348 aa4.33□□□□□ -1.72
CSMD3-210ENST00000534172 KIAA1683Q9H0B3 1180 aa4.33□□□□□ -1.72
CSMD3-210ENST00000534172 BCO1Q9HAY6 547 aa4.33□□□□□ -1.72
CSMD3-210ENST00000534172 C1orf112Q9NSG2 853 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms