RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 MYOGP15173 224 aa12.25□□□□□ -0.45
TRAPPC4-211ENST00000533012 RPL13P26373 211 aaKnown RBP12.25□□□□□ -0.45
TRAPPC4-211ENST00000533012 PBX2P40425 430 aa12.25□□□□□ -0.45
TRAPPC4-211ENST00000533012 ACOT2P49753 483 aa12.25□□□□□ -0.45
TRAPPC4-211ENST00000533012 GATMP50440 423 aa12.25□□□□□ -0.45
TRAPPC4-211ENST00000533012 POU5F1Q01860 360 aaKnown RBP12.25□□□□□ -0.45
TRAPPC4-211ENST00000533012 PAN2Q504Q3 1202 aaKnown RBP12.25□□□□□ -0.45
TRAPPC4-211ENST00000533012 SEZ6Q53EL9 994 aa12.25□□□□□ -0.45
TRAPPC4-211ENST00000533012 CLLU1OSQ5K130 101 aa12.25□□□□□ -0.45
TRAPPC4-211ENST00000533012 CAVIN1Q6NZI2 390 aaKnown RBP12.25□□□□□ -0.45
TRAPPC4-211ENST00000533012 SASS6Q6UVJ0 657 aa12.25□□□□□ -0.45
TRAPPC4-211ENST00000533012 C12orf56Q8IXR9 622 aa12.25□□□□□ -0.45
TRAPPC4-211ENST00000533012 CMTR2Q8IYT2 770 aaKnown RBP12.25□□□□□ -0.45
TRAPPC4-211ENST00000533012 ADSSL1Q8N142 457 aa12.25□□□□□ -0.45
TRAPPC4-211ENST00000533012 FIBCD1Q8N539 461 aa12.25□□□□□ -0.45
TRAPPC4-211ENST00000533012 CEP120Q8N960 986 aa12.25□□□□□ -0.45
TRAPPC4-211ENST00000533012 MLKLQ8NB16 471 aa12.25□□□□□ -0.45
TRAPPC4-211ENST00000533012 DHTKD1Q96HY7 919 aaPredicted RBP12.25□□□□□ -0.45
TRAPPC4-211ENST00000533012 RPS6KC1Q96S38 1066 aa12.25□□□□□ -0.45
TRAPPC4-211ENST00000533012 CBWD1Q9BRT8 395 aa12.25□□□□□ -0.45
TRAPPC4-211ENST00000533012 MRPL9Q9BYD2 267 aaKnown RBP12.25□□□□□ -0.45
TRAPPC4-211ENST00000533012 KCTD10Q9H3F6 313 aa12.25□□□□□ -0.45
TRAPPC4-211ENST00000533012 RPF1Q9H9Y2 349 aaKnown RBP12.25□□□□□ -0.45
TRAPPC4-211ENST00000533012 PLEKHA5Q9HAU0 1116 aa12.25□□□□□ -0.45
TRAPPC4-211ENST00000533012 KIAA1586Q9HCI6 787 aa12.25□□□□□ -0.45
TRAPPC4-211ENST00000533012 RNF19AQ9NV58 838 aa12.25□□□□□ -0.45
TRAPPC4-211ENST00000533012 INPP5FQ9Y2H2 1132 aa12.25□□□□□ -0.45
TRAPPC4-211ENST00000533012 PPP1R3GB7ZBB8 358 aa12.24□□□□□ -0.45
TRAPPC4-211ENST00000533012 CEP290O15078 2479 aa12.24□□□□□ -0.45
TRAPPC4-211ENST00000533012 LETM1O95202 739 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC4-211ENST00000533012 POMCP01189 267 aa12.24□□□□□ -0.45
TRAPPC4-211ENST00000533012 BMP6P22004 513 aa12.24□□□□□ -0.45
TRAPPC4-211ENST00000533012 MLH1P40692 756 aa12.24□□□□□ -0.45
TRAPPC4-211ENST00000533012 NLRP12P59046 1061 aa12.24□□□□□ -0.45
TRAPPC4-211ENST00000533012 RNASELQ05823 741 aaKnown RBP12.24□□□□□ -0.45
TRAPPC4-211ENST00000533012 MYBPC2Q14324 1141 aa12.24□□□□□ -0.45
TRAPPC4-211ENST00000533012 SLC10A6Q3KNW5 377 aa12.24□□□□□ -0.45
TRAPPC4-211ENST00000533012 RBM43Q6ZSC3 357 aaKnown RBP12.24□□□□□ -0.45
TRAPPC4-211ENST00000533012 CD302Q8IX05 232 aa12.24□□□□□ -0.45
TRAPPC4-211ENST00000533012 TMEM192Q8IY95 271 aa12.24□□□□□ -0.45
TRAPPC4-211ENST00000533012 GPD1LQ8N335 351 aa12.24□□□□□ -0.45
TRAPPC4-211ENST00000533012 XXYLT1Q8NBI6 393 aa12.24□□□□□ -0.45
TRAPPC4-211ENST00000533012 SP7Q8TDD2 431 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC4-211ENST00000533012 NOC3LQ8WTT2 800 aaKnown RBP12.24□□□□□ -0.45
TRAPPC4-211ENST00000533012 TMEM174Q8WUU8 243 aa12.24□□□□□ -0.45
TRAPPC4-211ENST00000533012 ZFP42Q96MM3 310 aa12.24□□□□□ -0.45
TRAPPC4-211ENST00000533012 FAM193BQ96PV7 902 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC4-211ENST00000533012 TSG101Q99816 390 aa12.24□□□□□ -0.45
TRAPPC4-211ENST00000533012 FAM213AQ9BRX8 229 aa12.24□□□□□ -0.45
TRAPPC4-211ENST00000533012 SEMA6BQ9H3T3 888 aa12.24□□□□□ -0.45
TRAPPC4-211ENST00000533012 SLC28A3Q9HAS3 691 aa12.24□□□□□ -0.45
TRAPPC4-211ENST00000533012 RC3H2Q9HBD1 1191 aaKnown RBP12.24□□□□□ -0.45
TRAPPC4-211ENST00000533012 HSPBP1Q9NZL4 362 aa12.24□□□□□ -0.45
TRAPPC4-211ENST00000533012 TMEM63CQ9P1W3 806 aa12.24□□□□□ -0.45
TRAPPC4-211ENST00000533012 ZMYM2Q9UBW7 1377 aa12.24□□□□□ -0.45
TRAPPC4-211ENST00000533012 CPSF3Q9UKF6 684 aaKnown RBP12.24□□□□□ -0.45
TRAPPC4-211ENST00000533012 TRAF3IP3Q9Y228 551 aa12.24□□□□□ -0.45
TRAPPC4-211ENST00000533012 YBX2Q9Y2T7 364 aaKnown RBP12.24□□□□□ -0.45
TRAPPC4-211ENST00000533012 LCHNA4D1U4 455 aa12.23□□□□□ -0.45
TRAPPC4-211ENST00000533012 GOLGA8IPA6NC78 632 aa12.23□□□□□ -0.45
TRAPPC4-211ENST00000533012 ZNF233A6NK53 670 aa12.23□□□□□ -0.45
TRAPPC4-211ENST00000533012 GOLGA8JA6NMD2 632 aa12.23□□□□□ -0.45
TRAPPC4-211ENST00000533012 TULP1O00294 542 aaPredicted RBP12.23□□□□□ -0.45
TRAPPC4-211ENST00000533012 INPPL1O15357 1258 aa12.23□□□□□ -0.45
TRAPPC4-211ENST00000533012 FAM189A1O60320 539 aa12.23□□□□□ -0.45
TRAPPC4-211ENST00000533012 EXOC3O60645 756 aa12.23□□□□□ -0.45
TRAPPC4-211ENST00000533012 THP07101 528 aa12.23□□□□□ -0.45
TRAPPC4-211ENST00000533012 CA3P07451 260 aa12.23□□□□□ -0.45
TRAPPC4-211ENST00000533012 DNAJB2P25686 324 aa12.23□□□□□ -0.45
TRAPPC4-211ENST00000533012 TNFSF9P41273 254 aa12.23□□□□□ -0.45
TRAPPC4-211ENST00000533012 SCNN1GP51170 649 aa12.23□□□□□ -0.45
TRAPPC4-211ENST00000533012 CYP2J2P51589 502 aa12.23□□□□□ -0.45
TRAPPC4-211ENST00000533012 AFF1P51825 1210 aaKnown RBP12.23□□□□□ -0.45
TRAPPC4-211ENST00000533012 ADAM9Q13443 819 aa12.23□□□□□ -0.45
TRAPPC4-211ENST00000533012 ENOX2Q16206 610 aaKnown RBP12.23□□□□□ -0.45
TRAPPC4-211ENST00000533012 HABP4Q5JVS0 413 aaKnown RBP12.23□□□□□ -0.45
TRAPPC4-211ENST00000533012 ZBTB41Q5SVQ8 909 aa12.23□□□□□ -0.45
TRAPPC4-211ENST00000533012 SPOUT1Q5T280 376 aaKnown RBP12.23□□□□□ -0.45
TRAPPC4-211ENST00000533012 CENPPQ6IPU0 288 aa12.23□□□□□ -0.45
TRAPPC4-211ENST00000533012 KLHL10Q6JEL2 608 aa12.23□□□□□ -0.45
TRAPPC4-211ENST00000533012 ALKAL1Q6UXT8 129 aa12.23□□□□□ -0.45
TRAPPC4-211ENST00000533012 SLC9A9Q8IVB4 645 aa12.23□□□□□ -0.45
TRAPPC4-211ENST00000533012 LRRC43Q8N309 656 aa12.23□□□□□ -0.45
TRAPPC4-211ENST00000533012 RDH13Q8NBN7 331 aa12.23□□□□□ -0.45
TRAPPC4-211ENST00000533012 P2RX5Q93086 422 aa12.23□□□□□ -0.45
TRAPPC4-211ENST00000533012 TIFAQ96CG3 184 aa12.23□□□□□ -0.45
TRAPPC4-211ENST00000533012 FAM212AQ96EL1 285 aa12.23□□□□□ -0.45
TRAPPC4-211ENST00000533012 SAAL1Q96ER3 474 aa12.23□□□□□ -0.45
TRAPPC4-211ENST00000533012 TSPAN18Q96SJ8 248 aa12.23□□□□□ -0.45
TRAPPC4-211ENST00000533012 NKX2-4Q9H2Z4 354 aa12.23□□□□□ -0.45
TRAPPC4-211ENST00000533012 AAASQ9NRG9 546 aa12.23□□□□□ -0.45
TRAPPC4-211ENST00000533012 TBC1D13Q9NVG8 400 aa12.23□□□□□ -0.45
TRAPPC4-211ENST00000533012 MIOSQ9NXC5 875 aa12.23□□□□□ -0.45
TRAPPC4-211ENST00000533012 DACH1Q9UI36 760 aa12.23□□□□□ -0.45
TRAPPC4-211ENST00000533012 RANBP2P49792 3224 aaKnown RBP12.23□□□□□ -0.45
TRAPPC4-211ENST00000533012 MYH11P35749 1972 aa12.23□□□□□ -0.45
TRAPPC4-211ENST00000533012 SMIM28A0A1B0GU29 152 aa12.22□□□□□ -0.45
TRAPPC4-211ENST00000533012 TTC26A0AVF1 554 aa12.22□□□□□ -0.45
TRAPPC4-211ENST00000533012 BICDL2A1A5D9 508 aa12.22□□□□□ -0.45
TRAPPC4-211ENST00000533012 LINC01553A4QN01 128 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms