RNA–Protein interactions for RNA: ENST00000531110.5

CD44-231, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-231ENST00000531110 PNISRQ8TF01 805 aaKnown RBP6.45□□□□□ -1.38
CD44-231ENST00000531110 EAF2Q96CJ1 260 aaPredicted RBP6.45□□□□□ -1.38
CD44-231ENST00000531110 PDLIM2Q96JY6 352 aa6.45□□□□□ -1.38
CD44-231ENST00000531110 UIMC1Q96RL1 719 aa6.45□□□□□ -1.38
CD44-231ENST00000531110 IQCGQ9H095 443 aaKnown RBP6.45□□□□□ -1.38
CD44-231ENST00000531110 VEZTQ9HBM0 779 aa6.45□□□□□ -1.38
CD44-231ENST00000531110 ETAA1Q9NY74 926 aa6.45□□□□□ -1.38
CD44-231ENST00000531110 POGKQ9P215 609 aa6.45□□□□□ -1.38
CD44-231ENST00000531110 MAGEL2Q9UJ55 1249 aa6.45□□□□□ -1.38
CD44-231ENST00000531110 SPEF1Q9Y4P9 236 aa6.45□□□□□ -1.38
CD44-231ENST00000531110 CGNL1Q0VF96 1302 aa6.45□□□□□ -1.38
CD44-231ENST00000531110 RPGRIP1LQ68CZ1 1315 aa6.45□□□□□ -1.38
CD44-231ENST00000531110 NBPF7P0C2Y1 421 aaPredicted RBP6.44□□□□□ -1.38
CD44-231ENST00000531110 HNRNPLP14866 589 aaKnown RBP eCLIP6.44□□□□□ -1.38
CD44-231ENST00000531110 TRPC1P48995 793 aa6.44□□□□□ -1.38
CD44-231ENST00000531110 MTNR1BP49286 362 aa6.44□□□□□ -1.38
CD44-231ENST00000531110 SLC5A3P53794 718 aa6.44□□□□□ -1.38
CD44-231ENST00000531110 LGALS4P56470 323 aa6.44□□□□□ -1.38
CD44-231ENST00000531110 SCAND1P57086 179 aa6.44□□□□□ -1.38
CD44-231ENST00000531110 PLP2Q04941 152 aa6.44□□□□□ -1.38
CD44-231ENST00000531110 BIRC2Q13490 618 aa6.44□□□□□ -1.38
CD44-231ENST00000531110 MUM1Q2TAK8 710 aa6.44□□□□□ -1.38
CD44-231ENST00000531110 MAP9Q49MG5 647 aa6.44□□□□□ -1.38
CD44-231ENST00000531110 C19orf54Q5BKX5 351 aa6.44□□□□□ -1.38
CD44-231ENST00000531110 CLEC4GQ6UXB4 293 aa6.44□□□□□ -1.38
CD44-231ENST00000531110 CCDC73Q6ZRK6 1079 aa6.44□□□□□ -1.38
CD44-231ENST00000531110 GAREM2Q75VX8 874 aa6.44□□□□□ -1.38
CD44-231ENST00000531110 TAX1BP1Q86VP1 789 aa6.44□□□□□ -1.38
CD44-231ENST00000531110 SMC5Q8IY18 1101 aa6.44□□□□□ -1.38
CD44-231ENST00000531110 CCDC191Q8NCU4 936 aa6.44□□□□□ -1.38
CD44-231ENST00000531110 SHCBP1Q8NEM2 672 aa6.44□□□□□ -1.38
CD44-231ENST00000531110 LRRC37BQ96QE4 947 aa6.44□□□□□ -1.38
CD44-231ENST00000531110 SH3GL3Q99963 347 aa6.44□□□□□ -1.38
CD44-231ENST00000531110 MAF1Q9H063 256 aa6.44□□□□□ -1.38
CD44-231ENST00000531110 ZNF277Q9NRM2 450 aaPredicted RBP6.44□□□□□ -1.38
CD44-231ENST00000531110 CCM2LQ9NUG4 571 aaPredicted RBP6.44□□□□□ -1.38
CD44-231ENST00000531110 RBM8AQ9Y5S9 174 aaKnown RBP6.44□□□□□ -1.38
CD44-231ENST00000531110 hCG_2014768A0A024R1R8 64 aa6.43□□□□□ -1.38
CD44-231ENST00000531110 TMCO5BA8MYB1 307 aa6.43□□□□□ -1.38
CD44-231ENST00000531110 CTIFO43310 598 aaKnown RBP6.43□□□□□ -1.38
CD44-231ENST00000531110 KIF5CO60282 957 aa6.43□□□□□ -1.38
CD44-231ENST00000531110 CDC14BO60729 498 aa6.43□□□□□ -1.38
CD44-231ENST00000531110 TOX4O94842 621 aa6.43□□□□□ -1.38
CD44-231ENST00000531110 LTA4HP09960 611 aaKnown RBP6.43□□□□□ -1.38
CD44-231ENST00000531110 CYP2C19P33261 490 aa6.43□□□□□ -1.38
CD44-231ENST00000531110 USP8P40818 1118 aa6.43□□□□□ -1.38
CD44-231ENST00000531110 BPIFB4P59827 614 aa6.43□□□□□ -1.38
CD44-231ENST00000531110 CBX1P83916 185 aa6.43□□□□□ -1.38
CD44-231ENST00000531110 ATP2C1P98194 919 aaPredicted RBP6.43□□□□□ -1.38
CD44-231ENST00000531110 CD69Q07108 199 aa6.43□□□□□ -1.38
CD44-231ENST00000531110 MTMR1Q13613 665 aa6.43□□□□□ -1.38
CD44-231ENST00000531110 RIN1Q13671 783 aa6.43□□□□□ -1.38
CD44-231ENST00000531110 TCTN3Q6NUS6 607 aa6.43□□□□□ -1.38
CD44-231ENST00000531110 POLNQ7Z5Q5 900 aa6.43□□□□□ -1.38
CD44-231ENST00000531110 ADGRE4PQ86SQ3 457 aa6.43□□□□□ -1.38
CD44-231ENST00000531110 CBARPQ8N350 705 aaPredicted RBP6.43□□□□□ -1.38
CD44-231ENST00000531110 TXLNBQ8N3L3 684 aa6.43□□□□□ -1.38
CD44-231ENST00000531110 MPHOSPH9Q99550 1183 aa6.43□□□□□ -1.38
CD44-231ENST00000531110 DPYSL5Q9BPU6 564 aa6.43□□□□□ -1.38
CD44-231ENST00000531110 SLX1AQ9BQ83 275 aa6.43□□□□□ -1.38
CD44-231ENST00000531110 TRIM8Q9BZR9 551 aa6.43□□□□□ -1.38
CD44-231ENST00000531110 PRDM12Q9H4Q4 367 aa6.43□□□□□ -1.38
CD44-231ENST00000531110 HOMER2Q9NSB8 354 aa6.43□□□□□ -1.38
CD44-231ENST00000531110 LPLP06858 475 aa6.42□□□□□ -1.38
CD44-231ENST00000531110 MAP2K2P36507 400 aa6.42□□□□□ -1.38
CD44-231ENST00000531110 PRPHP41219 470 aa6.42□□□□□ -1.38
CD44-231ENST00000531110 EIF5P55010 431 aaKnown RBP6.42□□□□□ -1.38
CD44-231ENST00000531110 ATP2B3Q16720 1220 aa6.42□□□□□ -1.38
CD44-231ENST00000531110 SPATS1Q496A3 300 aa6.42□□□□□ -1.38
CD44-231ENST00000531110 BTNL9Q6UXG8 535 aa6.42□□□□□ -1.38
CD44-231ENST00000531110 LIMS2Q7Z4I7 341 aa6.42□□□□□ -1.38
CD44-231ENST00000531110 CMIPQ8IY22 773 aa6.42□□□□□ -1.38
CD44-231ENST00000531110 AMOTL1Q8IY63 956 aa6.42□□□□□ -1.38
CD44-231ENST00000531110 GPR135Q8IZ08 494 aa6.42□□□□□ -1.38
CD44-231ENST00000531110 RPUSD2Q8IZ73 545 aaKnown RBP6.42□□□□□ -1.38
CD44-231ENST00000531110 IQUBQ8NA54 791 aa6.42□□□□□ -1.38
CD44-231ENST00000531110 GIMAP8Q8ND71 665 aaPredicted RBP6.42□□□□□ -1.38
CD44-231ENST00000531110 PIK3C3Q8NEB9 887 aa6.42□□□□□ -1.38
CD44-231ENST00000531110 ANKRD20A12PQ8NF67 263 aa6.42□□□□□ -1.38
CD44-231ENST00000531110 FATE1Q969F0 183 aa6.42□□□□□ -1.38
CD44-231ENST00000531110 PTPN18Q99952 460 aa6.42□□□□□ -1.38
CD44-231ENST00000531110 UTP14AQ9BVJ6 771 aaKnown RBP6.42□□□□□ -1.38
CD44-231ENST00000531110 PLA2G12BQ9BX93 195 aa6.42□□□□□ -1.38
CD44-231ENST00000531110 C1QTNF3Q9BXJ4 246 aa6.42□□□□□ -1.38
CD44-231ENST00000531110 SLC13A1Q9BZW2 595 aa6.42□□□□□ -1.38
CD44-231ENST00000531110 C12orf65Q9H3J6 166 aaKnown RBP6.42□□□□□ -1.38
CD44-231ENST00000531110 CD248Q9HCU0 757 aa6.42□□□□□ -1.38
CD44-231ENST00000531110 DIAPH3Q9NSV4 1193 aa6.42□□□□□ -1.38
CD44-231ENST00000531110 SCOCQ9UIL1 159 aa6.42□□□□□ -1.38
CD44-231ENST00000531110 ZFR2Q9UPR6 939 aaKnown RBP6.42□□□□□ -1.38
CD44-231ENST00000531110 V9GYY5 206 aaPredicted RBP6.42□□□□□ -1.38
CD44-231ENST00000531110 DHX57Q6P158 1386 aaKnown RBP6.42□□□□□ -1.38
CD44-231ENST00000531110 IPO5O00410 1097 aaKnown RBP6.41□□□□□ -1.38
CD44-231ENST00000531110 MARCH6O60337 910 aa6.41□□□□□ -1.38
CD44-231ENST00000531110 KINO60870 393 aaKnown RBP6.41□□□□□ -1.38
CD44-231ENST00000531110 PHF2O75151 1096 aa6.41□□□□□ -1.38
CD44-231ENST00000531110 HMMRO75330 724 aa6.41□□□□□ -1.38
CD44-231ENST00000531110 CDKL5O76039 1030 aa6.41□□□□□ -1.38
CD44-231ENST00000531110 ALDH1A2O94788 518 aa6.41□□□□□ -1.38
CD44-231ENST00000531110 RBP3P10745 1247 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms