RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 SMARCE1Q969G3 411 aa16.72■□□□□ 0.27
CCS-206ENST00000530961 ZBTB45Q96K62 511 aaPredicted RBP16.72■□□□□ 0.27
CCS-206ENST00000530961 SAMD11Q96NU1 681 aa16.72■□□□□ 0.27
CCS-206ENST00000530961 CCDC94Q9BW85 323 aaPredicted RBP16.72■□□□□ 0.27
CCS-206ENST00000530961 RNF39Q9H2S5 420 aa16.72■□□□□ 0.27
CCS-206ENST00000530961 SNTG2Q9NY99 539 aa16.72■□□□□ 0.27
CCS-206ENST00000530961 ANKFY1Q9P2R3 1169 aa16.72■□□□□ 0.27
CCS-206ENST00000530961 PARP2Q9UGN5 583 aa16.72■□□□□ 0.27
CCS-206ENST00000530961 RWDD3Q9Y3V2 267 aa16.72■□□□□ 0.27
CCS-206ENST00000530961 ZMYM2Q9UBW7 1377 aa16.72■□□□□ 0.27
CCS-206ENST00000530961 A0A0B4J269 797 aa16.71■□□□□ 0.27
CCS-206ENST00000530961 LINC01553A4QN01 128 aa16.71■□□□□ 0.27
CCS-206ENST00000530961 MEIS3P2A8K0S8 358 aa16.71■□□□□ 0.27
CCS-206ENST00000530961 MATR3P43243 847 aaKnown RBP eCLIP16.71■□□□□ 0.27
CCS-206ENST00000530961 YARSP54577 528 aaKnown RBP16.71■□□□□ 0.27
CCS-206ENST00000530961 PAN2Q504Q3 1202 aaKnown RBP16.71■□□□□ 0.27
CCS-206ENST00000530961 LRRC43Q8N309 656 aa16.71■□□□□ 0.27
CCS-206ENST00000530961 CLP1Q92989 425 aaKnown RBP16.71■□□□□ 0.27
CCS-206ENST00000530961 ACAP3Q96P50 834 aa16.71■□□□□ 0.27
CCS-206ENST00000530961 TGS1Q96RS0 853 aaKnown RBP16.71■□□□□ 0.27
CCS-206ENST00000530961 APOL6Q9BWW8 343 aa16.71■□□□□ 0.27
CCS-206ENST00000530961 TOPORSQ9NS56 1045 aaPredicted RBP16.71■□□□□ 0.27
CCS-206ENST00000530961 PCDHA5Q9Y5H7 936 aa16.71■□□□□ 0.27
CCS-206ENST00000530961 CARNS1A5YM72 827 aa16.7■□□□□ 0.26
CCS-206ENST00000530961 ARL5CA6NH57 179 aa16.7■□□□□ 0.26
CCS-206ENST00000530961 ANKRD63C9JTQ0 380 aa16.7■□□□□ 0.26
CCS-206ENST00000530961 KIAA0391O15091 583 aaKnown RBP16.7■□□□□ 0.26
CCS-206ENST00000530961 CLTAP09496 248 aa16.7■□□□□ 0.26
CCS-206ENST00000530961 BMP1P13497 986 aa16.7■□□□□ 0.26
CCS-206ENST00000530961 AKAP5P24588 427 aa16.7■□□□□ 0.26
CCS-206ENST00000530961 ERVK-21P61565 698 aa16.7■□□□□ 0.26
CCS-206ENST00000530961 POU5F1Q01860 360 aaKnown RBP16.7■□□□□ 0.26
CCS-206ENST00000530961 KNOP1Q1ED39 458 aaKnown RBP16.7■□□□□ 0.26
CCS-206ENST00000530961 SLC39A4Q6P5W5 647 aa16.7■□□□□ 0.26
CCS-206ENST00000530961 THNSL1Q8IYQ7 743 aa16.7■□□□□ 0.26
CCS-206ENST00000530961 KIAA0895Q8NCT3 520 aa16.7■□□□□ 0.26
CCS-206ENST00000530961 GLIS3Q8NEA6 775 aa16.7■□□□□ 0.26
CCS-206ENST00000530961 GAD1Q99259 594 aa16.7■□□□□ 0.26
CCS-206ENST00000530961 MSTO1Q9BUK6 570 aa16.7■□□□□ 0.26
CCS-206ENST00000530961 GBP3Q9H0R5 595 aa16.7■□□□□ 0.26
CCS-206ENST00000530961 AAASQ9NRG9 546 aa16.7■□□□□ 0.26
CCS-206ENST00000530961 TYW1Q9NV66 732 aaKnown RBP16.7■□□□□ 0.26
CCS-206ENST00000530961 CGNQ9P2M7 1197 aaKnown RBP16.7■□□□□ 0.26
CCS-206ENST00000530961 INPP5FQ9Y2H2 1132 aa16.7■□□□□ 0.26
CCS-206ENST00000530961 OGTO15294 1046 aa16.69■□□□□ 0.26
CCS-206ENST00000530961 RECQL4O94761 1208 aa16.69■□□□□ 0.26
CCS-206ENST00000530961 RB1P06400 928 aa16.69■□□□□ 0.26
CCS-206ENST00000530961 GARTP22102 1010 aa16.69■□□□□ 0.26
CCS-206ENST00000530961 ADSSP30520 456 aa16.69■□□□□ 0.26
CCS-206ENST00000530961 HOXD13P35453 343 aa16.69■□□□□ 0.26
CCS-206ENST00000530961 MLH1P40692 756 aa16.69■□□□□ 0.26
CCS-206ENST00000530961 HS2ST1Q7LGA3 356 aa16.69■□□□□ 0.26
CCS-206ENST00000530961 GOLGA5Q8TBA6 731 aa16.69■□□□□ 0.26
CCS-206ENST00000530961 POMGNT1Q8WZA1 660 aa16.69■□□□□ 0.26
CCS-206ENST00000530961 PLVAPQ9BX97 442 aa16.69■□□□□ 0.26
CCS-206ENST00000530961 HAPLN2Q9GZV7 340 aa16.69■□□□□ 0.26
CCS-206ENST00000530961 TBC1D13Q9NVG8 400 aa16.69■□□□□ 0.26
CCS-206ENST00000530961 GDAQ9Y2T3 454 aa16.69■□□□□ 0.26
CCS-206ENST00000530961 MRPL42Q9Y6G3 142 aaKnown RBP16.69■□□□□ 0.26
CCS-206ENST00000530961 TET1Q8NFU7 2136 aa16.69■□□□□ 0.26
CCS-206ENST00000530961 ARHGEF15O94989 841 aa16.68■□□□□ 0.26
CCS-206ENST00000530961 LDHAP00338 332 aaKnown RBP16.68■□□□□ 0.26
CCS-206ENST00000530961 HARSP12081 509 aaKnown RBP16.68■□□□□ 0.26
CCS-206ENST00000530961 LAG3P18627 525 aa16.68■□□□□ 0.26
CCS-206ENST00000530961 BMPR1AP36894 532 aa16.68■□□□□ 0.26
CCS-206ENST00000530961 RNASELQ05823 741 aaKnown RBP16.68■□□□□ 0.26
CCS-206ENST00000530961 HSP90AA2PQ14568 343 aaPredicted RBP16.68■□□□□ 0.26
CCS-206ENST00000530961 CCDC85BQ15834 202 aaPredicted RBP16.68■□□□□ 0.26
CCS-206ENST00000530961 LRRC55Q6ZSA7 311 aa16.68■□□□□ 0.26
CCS-206ENST00000530961 TMEM192Q8IY95 271 aa16.68■□□□□ 0.26
CCS-206ENST00000530961 CEP120Q8N960 986 aa16.68■□□□□ 0.26
CCS-206ENST00000530961 RPS6KC1Q96S38 1066 aa16.68■□□□□ 0.26
CCS-206ENST00000530961 PLEKHA5Q9HAU0 1116 aa16.68■□□□□ 0.26
CCS-206ENST00000530961 AGO2Q9UKV8 859 aaKnown RBP16.68■□□□□ 0.26
CCS-206ENST00000530961 SCN5AQ14524 2016 aa16.68■□□□□ 0.26
CCS-206ENST00000530961 MYH15Q9Y2K3 1946 aa16.68■□□□□ 0.26
CCS-206ENST00000530961 TISP43B9A030 160 aa16.67■□□□□ 0.26
CCS-206ENST00000530961 C5orf67F2Z3F1 127 aa16.67■□□□□ 0.26
CCS-206ENST00000530961 TGFB1I1O43294 461 aa16.67■□□□□ 0.26
CCS-206ENST00000530961 FAM189A1O60320 539 aa16.67■□□□□ 0.26
CCS-206ENST00000530961 MBD3O95983 291 aa16.67■□□□□ 0.26
CCS-206ENST00000530961 LINC00271P0C7V0 271 aa16.67■□□□□ 0.26
CCS-206ENST00000530961 OSTNP61366 133 aa16.67■□□□□ 0.26
CCS-206ENST00000530961 GRIK3Q13003 919 aa16.67■□□□□ 0.26
CCS-206ENST00000530961 XKR4Q5GH76 650 aa16.67■□□□□ 0.26
CCS-206ENST00000530961 SPOUT1Q5T280 376 aaKnown RBP16.67■□□□□ 0.26
CCS-206ENST00000530961 ZNF658Q5TYW1 1059 aaPredicted RBP16.67■□□□□ 0.26
CCS-206ENST00000530961 ARMCX5Q6P1M9 558 aa16.67■□□□□ 0.26
CCS-206ENST00000530961 ALKAL1Q6UXT8 129 aa16.67■□□□□ 0.26
CCS-206ENST00000530961 NELFCDQ8IXH7 590 aa16.67■□□□□ 0.26
CCS-206ENST00000530961 GUF1Q8N442 669 aaKnown RBP16.67■□□□□ 0.26
CCS-206ENST00000530961 GSTCDQ8NEC7 633 aa16.67■□□□□ 0.26
CCS-206ENST00000530961 ZFP42Q96MM3 310 aa16.67■□□□□ 0.26
CCS-206ENST00000530961 FAM193BQ96PV7 902 aaPredicted RBP16.67■□□□□ 0.26
CCS-206ENST00000530961 TSPAN18Q96SJ8 248 aa16.67■□□□□ 0.26
CCS-206ENST00000530961 CLSTN2Q9H4D0 955 aa16.67■□□□□ 0.26
CCS-206ENST00000530961 CWH43Q9H720 699 aa16.67■□□□□ 0.26
CCS-206ENST00000530961 KLK14Q9P0G3 267 aa16.67■□□□□ 0.26
CCS-206ENST00000530961 PCDHB12Q9Y5F1 795 aa16.67■□□□□ 0.26
CCS-206ENST00000530961 ARID2Q68CP9 1835 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms