RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 CPB1P15086 417 aa8.61□□□□□ -1.03
CTNND1-220ENST00000529526 SCP2P22307 547 aa8.61□□□□□ -1.03
CTNND1-220ENST00000529526 RGS7P49802 495 aa8.61□□□□□ -1.03
CTNND1-220ENST00000529526 ARFIP2P53365 341 aa8.61□□□□□ -1.03
CTNND1-220ENST00000529526 EN1Q05925 392 aaPredicted RBP8.61□□□□□ -1.03
CTNND1-220ENST00000529526 ST13P4Q8IZP2 240 aaPredicted RBP8.61□□□□□ -1.03
CTNND1-220ENST00000529526 IGDCC4Q8TDY8 1250 aa8.61□□□□□ -1.03
CTNND1-220ENST00000529526 FAM161BQ96MY7 647 aa8.61□□□□□ -1.03
CTNND1-220ENST00000529526 NOP53Q9NZM5 478 aaKnown RBP8.61□□□□□ -1.03
CTNND1-220ENST00000529526 SCHIP1Q9P0W5 487 aaPredicted RBP8.61□□□□□ -1.03
CTNND1-220ENST00000529526 A0A1W2PQC6 194 aa8.6□□□□□ -1.03
CTNND1-220ENST00000529526 KCNN4O15554 427 aa8.6□□□□□ -1.03
CTNND1-220ENST00000529526 RTN2O75298 545 aa8.6□□□□□ -1.03
CTNND1-220ENST00000529526 ERFP50548 548 aa8.6□□□□□ -1.03
CTNND1-220ENST00000529526 EIF3EP60228 445 aaKnown RBP8.6□□□□□ -1.03
CTNND1-220ENST00000529526 NR1H3Q13133 447 aa8.6□□□□□ -1.03
CTNND1-220ENST00000529526 DUOXA2Q1HG44 320 aa8.6□□□□□ -1.03
CTNND1-220ENST00000529526 FASTKD1Q53R41 847 aaKnown RBP8.6□□□□□ -1.03
CTNND1-220ENST00000529526 LRRC37BQ96QE4 947 aa8.6□□□□□ -1.03
CTNND1-220ENST00000529526 FAM118BQ9BPY3 351 aa8.6□□□□□ -1.03
CTNND1-220ENST00000529526 MED14O60244 1454 aa8.6□□□□□ -1.03
CTNND1-220ENST00000529526 CCDC78A2IDD5 438 aa8.6□□□□□ -1.03
CTNND1-220ENST00000529526 SETSIPP0DME0 302 aa8.6□□□□□ -1.03
CTNND1-220ENST00000529526 ACTN3Q08043 901 aaPredicted RBP8.6□□□□□ -1.03
CTNND1-220ENST00000529526 CEP55Q53EZ4 464 aa8.6□□□□□ -1.03
CTNND1-220ENST00000529526 DDIASQ8IXT1 998 aa8.6□□□□□ -1.03
CTNND1-220ENST00000529526 OR6J1Q8NGC5 347 aa8.6□□□□□ -1.03
CTNND1-220ENST00000529526 ZNF507Q8TCN5 953 aa8.6□□□□□ -1.03
CTNND1-220ENST00000529526 ULK4Q96C45 1275 aa8.6□□□□□ -1.03
CTNND1-220ENST00000529526 BTBD6Q96KE9 485 aa8.6□□□□□ -1.03
CTNND1-220ENST00000529526 ACAP3Q96P50 834 aa8.6□□□□□ -1.03
CTNND1-220ENST00000529526 TRIM9Q9C026 710 aa8.6□□□□□ -1.03
CTNND1-220ENST00000529526 AGPAT5Q9NUQ2 364 aa8.6□□□□□ -1.03
CTNND1-220ENST00000529526 NDFIP2Q9NV92 336 aa8.6□□□□□ -1.03
CTNND1-220ENST00000529526 MTMR4Q9NYA4 1195 aa8.6□□□□□ -1.03
CTNND1-220ENST00000529526 PIN4Q9Y237 131 aaKnown RBP8.6□□□□□ -1.03
CTNND1-220ENST00000529526 FAM187AA6NFU0 413 aa8.6□□□□□ -1.03
CTNND1-220ENST00000529526 F8W8V4 182 aa8.6□□□□□ -1.03
CTNND1-220ENST00000529526 MCF2P10911 925 aa8.6□□□□□ -1.03
CTNND1-220ENST00000529526 GRIK1P39086 918 aa8.6□□□□□ -1.03
CTNND1-220ENST00000529526 VSNL1P62760 191 aa8.6□□□□□ -1.03
CTNND1-220ENST00000529526 PRAMEP78395 509 aa8.6□□□□□ -1.03
CTNND1-220ENST00000529526 BTBD8Q5XKL5 378 aa8.6□□□□□ -1.03
CTNND1-220ENST00000529526 TADA2BQ86TJ2 420 aa8.6□□□□□ -1.03
CTNND1-220ENST00000529526 OR6P1Q8NGX9 317 aa8.6□□□□□ -1.03
CTNND1-220ENST00000529526 POLR3CQ9BUI4 534 aaPredicted RBP8.6□□□□□ -1.03
CTNND1-220ENST00000529526 SPATS2LQ9NUQ6 558 aaKnown RBP8.6□□□□□ -1.03
CTNND1-220ENST00000529526 TRIM33Q9UPN9 1127 aa8.6□□□□□ -1.03
CTNND1-220ENST00000529526 MYO1CO00159 1063 aa8.6□□□□□ -1.03
CTNND1-220ENST00000529526 STK25O00506 426 aa8.6□□□□□ -1.03
CTNND1-220ENST00000529526 TXNP10599 105 aaKnown RBP8.6□□□□□ -1.03
CTNND1-220ENST00000529526 ADRA2BP18089 450 aa8.6□□□□□ -1.03
CTNND1-220ENST00000529526 CRB1P82279 1406 aa8.6□□□□□ -1.03
CTNND1-220ENST00000529526 TMEM62Q0P6H9 643 aa8.6□□□□□ -1.03
CTNND1-220ENST00000529526 KCNB1Q14721 858 aa8.6□□□□□ -1.03
CTNND1-220ENST00000529526 EFTUD2Q15029 972 aaKnown RBP eCLIP8.6□□□□□ -1.033e-8■■■■■ 29.5
CTNND1-220ENST00000529526 PID1Q7Z2X4 250 aa8.6□□□□□ -1.03
CTNND1-220ENST00000529526 SPATA4Q8NEY3 305 aa8.6□□□□□ -1.03
CTNND1-220ENST00000529526 CENPKQ9BS16 269 aa8.6□□□□□ -1.03
CTNND1-220ENST00000529526 CFAP69A5D8W1 941 aa8.6□□□□□ -1.03
CTNND1-220ENST00000529526 STAT5BP51692 787 aa8.6□□□□□ -1.03
CTNND1-220ENST00000529526 MORF4L2Q15014 288 aa8.6□□□□□ -1.03
CTNND1-220ENST00000529526 WDR72Q3MJ13 1102 aa8.6□□□□□ -1.03
CTNND1-220ENST00000529526 ZC2HC1CQ53FD0 456 aaPredicted RBP8.6□□□□□ -1.03
CTNND1-220ENST00000529526 PLA2G4FQ68DD2 849 aa8.6□□□□□ -1.03
CTNND1-220ENST00000529526 ATP11CQ8NB49 1132 aa8.6□□□□□ -1.03
CTNND1-220ENST00000529526 PGBD4Q96DM1 585 aa8.6□□□□□ -1.03
CTNND1-220ENST00000529526 MTA3Q9BTC8 594 aa8.6□□□□□ -1.03
CTNND1-220ENST00000529526 TULP4Q9NRJ4 1543 aa8.6□□□□□ -1.03
CTNND1-220ENST00000529526 POLR1AO95602 1720 aaPredicted RBP8.6□□□□□ -1.03
CTNND1-220ENST00000529526 PDXKO00764 312 aa8.59□□□□□ -1.03
CTNND1-220ENST00000529526 DPYSL4O14531 572 aa8.59□□□□□ -1.03
CTNND1-220ENST00000529526 LMNAP02545 664 aaKnown RBP8.59□□□□□ -1.03
CTNND1-220ENST00000529526 ZNF543Q08ER8 600 aa8.59□□□□□ -1.03
CTNND1-220ENST00000529526 PRAMEF18Q5VWM3 479 aa8.59□□□□□ -1.03
CTNND1-220ENST00000529526 NRBF2Q96F24 287 aa8.59□□□□□ -1.03
CTNND1-220ENST00000529526 CLMNQ96JQ2 1002 aa8.59□□□□□ -1.03
CTNND1-220ENST00000529526 AGAP3Q96P47 875 aa8.59□□□□□ -1.03
CTNND1-220ENST00000529526 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.59□□□□□ -1.03
CTNND1-220ENST00000529526 CDC42BPAQ5VT25 1732 aa8.59□□□□□ -1.03
CTNND1-220ENST00000529526 E2F8A0AVK6 867 aa8.59□□□□□ -1.03
CTNND1-220ENST00000529526 HNRNPCL2B2RXH8 293 aa8.59□□□□□ -1.03
CTNND1-220ENST00000529526 HNRNPCL1O60812 293 aaKnown RBP8.59□□□□□ -1.03
CTNND1-220ENST00000529526 TYK2P29597 1187 aa8.59□□□□□ -1.03
CTNND1-220ENST00000529526 SESN2P58004 480 aaPredicted RBP8.59□□□□□ -1.03
CTNND1-220ENST00000529526 P3H1Q32P28 736 aa8.59□□□□□ -1.03
CTNND1-220ENST00000529526 ITPRIPL1Q6GPH6 555 aa8.59□□□□□ -1.03
CTNND1-220ENST00000529526 TMED8Q6PL24 325 aaPredicted RBP8.59□□□□□ -1.03
CTNND1-220ENST00000529526 TRIM72Q6ZMU5 477 aa8.59□□□□□ -1.03
CTNND1-220ENST00000529526 ENOSF1Q7L5Y1 443 aa8.59□□□□□ -1.03
CTNND1-220ENST00000529526 MICALL2Q8IY33 904 aa8.59□□□□□ -1.03
CTNND1-220ENST00000529526 USP33Q8TEY7 942 aa8.59□□□□□ -1.03
CTNND1-220ENST00000529526 ASIC4Q96FT7 647 aa8.59□□□□□ -1.03
CTNND1-220ENST00000529526 MAGEB5Q9BZ81 275 aa8.59□□□□□ -1.03
CTNND1-220ENST00000529526 AGAP1Q9UPQ3 857 aa8.59□□□□□ -1.03
CTNND1-220ENST00000529526 MYMKA6NI61 221 aa8.59□□□□□ -1.03
CTNND1-220ENST00000529526 COPB2P35606 906 aa8.59□□□□□ -1.03
CTNND1-220ENST00000529526 MAGEA9P43362 315 aa8.59□□□□□ -1.03
CTNND1-220ENST00000529526 ALDH18A1P54886 795 aaKnown RBP8.59□□□□□ -1.03
CTNND1-220ENST00000529526 BAATQ14032 418 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms