RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, human

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLNS1A-209	ENST00000527299	ADCY7	P51828	1080 aa		4.19	□□□□□ -1.74
CLNS1A-209	ENST00000527299	SLC8A3	P57103	927 aa		4.19	□□□□□ -1.74
CLNS1A-209	ENST00000527299	PRPF4B	Q13523	1007 aa	Known RBP	4.19	□□□□□ -1.74
CLNS1A-209	ENST00000527299	NBPF8	Q3BBV2	869 aa		4.19	□□□□□ -1.74
CLNS1A-209	ENST00000527299	FIGN	Q5HY92	759 aa		4.19	□□□□□ -1.74
CLNS1A-209	ENST00000527299	SOGA3	Q5TF21	947 aa		4.19	□□□□□ -1.74
CLNS1A-209	ENST00000527299	CDCA2	Q69YH5	1023 aa	Predicted RBP	4.19	□□□□□ -1.74
CLNS1A-209	ENST00000527299	FBXO38	Q6PIJ6	1188 aa		4.19	□□□□□ -1.74
CLNS1A-209	ENST00000527299	LRRC31	Q6UY01	552 aa		4.19	□□□□□ -1.74
CLNS1A-209	ENST00000527299	CCDC80	Q76M96	950 aa		4.19	□□□□□ -1.74
CLNS1A-209	ENST00000527299	CATIP	Q7Z7H3	387 aa		4.19	□□□□□ -1.74
CLNS1A-209	ENST00000527299	SKAP1	Q86WV1	359 aa		4.19	□□□□□ -1.74
CLNS1A-209	ENST00000527299	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	4.19	□□□□□ -1.74
CLNS1A-209	ENST00000527299	CCDC112	Q8NEF3	446 aa		4.19	□□□□□ -1.74
CLNS1A-209	ENST00000527299	CTCFL	Q8NI51	663 aa	Predicted RBP	4.19	□□□□□ -1.74
CLNS1A-209	ENST00000527299	SLC25A43	Q8WUT9	341 aa	Predicted RBP	4.19	□□□□□ -1.74
CLNS1A-209	ENST00000527299	TBC1D5	Q92609	795 aa		4.19	□□□□□ -1.74
CLNS1A-209	ENST00000527299	SMARCE1	Q969G3	411 aa		4.19	□□□□□ -1.74
CLNS1A-209	ENST00000527299	RBM17	Q96I25	401 aa	Known RBP	4.19	□□□□□ -1.74
CLNS1A-209	ENST00000527299	INO80B	Q9C086	356 aa	Predicted RBP	4.19	□□□□□ -1.74
CLNS1A-209	ENST00000527299	TGIF2	Q9GZN2	237 aa		4.19	□□□□□ -1.74
CLNS1A-209	ENST00000527299	ST7	Q9NRC1	585 aa		4.19	□□□□□ -1.74
CLNS1A-209	ENST00000527299	BARX2	Q9UMQ3	279 aa	Predicted RBP	4.19	□□□□□ -1.74
CLNS1A-209	ENST00000527299	ATP8A1	Q9Y2Q0	1164 aa		4.19	□□□□□ -1.74
CLNS1A-209	ENST00000527299	CTDP1	Q9Y5B0	961 aa	Predicted RBP	4.19	□□□□□ -1.74
CLNS1A-209	ENST00000527299	ANKRD36B	Q8N2N9	1353 aa		4.18	□□□□□ -1.74
CLNS1A-209	ENST00000527299	TONSL	Q96HA7	1378 aa		4.18	□□□□□ -1.74
CLNS1A-209	ENST00000527299	ZAR1L	A6NP61	321 aa		4.18	□□□□□ -1.74
CLNS1A-209	ENST00000527299	CHUK	O15111	745 aa		4.18	□□□□□ -1.74
CLNS1A-209	ENST00000527299	OPA1	O60313	960 aa		4.18	□□□□□ -1.74
CLNS1A-209	ENST00000527299	E2F6	O75461	281 aa		4.18	□□□□□ -1.74
CLNS1A-209	ENST00000527299	RTN3	O95197	1032 aa	Predicted RBP	4.18	□□□□□ -1.74
CLNS1A-209	ENST00000527299	MYL1	P05976	194 aa		4.18	□□□□□ -1.74
CLNS1A-209	ENST00000527299	PABPC1	P11940	636 aa	Known RBP	4.18	□□□□□ -1.74
CLNS1A-209	ENST00000527299	HNRNPH1	P31943	449 aa	Known RBP	4.18	□□□□□ -1.74
CLNS1A-209	ENST00000527299	STIP1	P31948	543 aa	Known RBP	4.18	□□□□□ -1.74
CLNS1A-209	ENST00000527299	ETFB	P38117	255 aa		4.18	□□□□□ -1.74
CLNS1A-209	ENST00000527299	ST5	P78524	1137 aa		4.18	□□□□□ -1.74
CLNS1A-209	ENST00000527299	WLS	Q5T9L3	541 aa		4.18	□□□□□ -1.74
CLNS1A-209	ENST00000527299	ANKRD45	Q5TZF3	282 aa		4.18	□□□□□ -1.74
CLNS1A-209	ENST00000527299	SFMBT2	Q5VUG0	894 aa		4.18	□□□□□ -1.74
CLNS1A-209	ENST00000527299	NSMF	Q6X4W1	530 aa		4.18	□□□□□ -1.74
CLNS1A-209	ENST00000527299	CCDC73	Q6ZRK6	1079 aa		4.18	□□□□□ -1.74
CLNS1A-209	ENST00000527299	OSTM1	Q86WC4	334 aa		4.18	□□□□□ -1.74
CLNS1A-209	ENST00000527299	PTRH1	Q86Y79	214 aa	Known RBP	4.18	□□□□□ -1.74
CLNS1A-209	ENST00000527299	MFN1	Q8IWA4	741 aa		4.18	□□□□□ -1.74
CLNS1A-209	ENST00000527299	WDR63	Q8IWG1	891 aa		4.18	□□□□□ -1.74
CLNS1A-209	ENST00000527299	GSPT2	Q8IYD1	628 aa	Known RBP	4.18	□□□□□ -1.74
CLNS1A-209	ENST00000527299	BCL6B	Q8N143	479 aa	Predicted RBP	4.18	□□□□□ -1.74
CLNS1A-209	ENST00000527299	PRPF38A	Q8NAV1	312 aa	Known RBP	4.18	□□□□□ -1.74
CLNS1A-209	ENST00000527299	C3orf20	Q8ND61	904 aa		4.18	□□□□□ -1.74
CLNS1A-209	ENST00000527299	BICD2	Q8TD16	824 aa		4.18	□□□□□ -1.74
CLNS1A-209	ENST00000527299	N4BP2L2	Q92802	583 aa	Predicted RBP	4.18	□□□□□ -1.74
CLNS1A-209	ENST00000527299	LPP	Q93052	612 aa		4.18	□□□□□ -1.74
CLNS1A-209	ENST00000527299	BATF3	Q9NR55	127 aa		4.18	□□□□□ -1.74
CLNS1A-209	ENST00000527299	ARHGEF4	Q9NR80	690 aa		4.18	□□□□□ -1.74
CLNS1A-209	ENST00000527299	UCKL1	Q9NWZ5	548 aa		4.18	□□□□□ -1.74
CLNS1A-209	ENST00000527299	SPATA7	Q9P0W8	599 aa		4.18	□□□□□ -1.74
CLNS1A-209	ENST00000527299	TRPS1	Q9UHF7	1281 aa		4.18	□□□□□ -1.74
CLNS1A-209	ENST00000527299	USP25	Q9UHP3	1055 aa		4.18	□□□□□ -1.74
CLNS1A-209	ENST00000527299	VWA7	Q9Y334	891 aa		4.18	□□□□□ -1.74
CLNS1A-209	ENST00000527299	CECR2	Q9BXF3	1484 aa		4.18	□□□□□ -1.74
CLNS1A-209	ENST00000527299	MTUS2	Q5JR59	1369 aa		4.17	□□□□□ -1.74
CLNS1A-209	ENST00000527299	KLRG2	A4D1S0	409 aa	Predicted RBP	4.17	□□□□□ -1.74
CLNS1A-209	ENST00000527299	GRID2IP	A4D2P6	1211 aa		4.17	□□□□□ -1.74
CLNS1A-209	ENST00000527299	EME2	A4GXA9	379 aa	Predicted RBP	4.17	□□□□□ -1.74
CLNS1A-209	ENST00000527299	PRAMEF25	A6NGN4	478 aa		4.17	□□□□□ -1.74
CLNS1A-209	ENST00000527299	AHCYL1	O43865	530 aa		4.17	□□□□□ -1.74
CLNS1A-209	ENST00000527299	FAM20B	O75063	409 aa		4.17	□□□□□ -1.74
CLNS1A-209	ENST00000527299	CLASP2	O75122	1294 aa	Known RBP	4.17	□□□□□ -1.74
CLNS1A-209	ENST00000527299	HMMR	O75330	724 aa		4.17	□□□□□ -1.74
CLNS1A-209	ENST00000527299	MAF	O75444	373 aa	Predicted RBP	4.17	□□□□□ -1.74
CLNS1A-209	ENST00000527299	STK10	O94804	968 aa	Known RBP	4.17	□□□□□ -1.74
CLNS1A-209	ENST00000527299	MBD3	O95983	291 aa		4.17	□□□□□ -1.74
CLNS1A-209	ENST00000527299	SSB	P05455	408 aa	Known RBP eCLIP	4.17	□□□□□ -1.74
CLNS1A-209	ENST00000527299	PYGL	P06737	847 aa		4.17	□□□□□ -1.74
CLNS1A-209	ENST00000527299	YY1	P25490	414 aa		4.17	□□□□□ -1.74
CLNS1A-209	ENST00000527299	GCK	P35557	465 aa		4.17	□□□□□ -1.74
CLNS1A-209	ENST00000527299	STAT3	P40763	770 aa		4.17	□□□□□ -1.74
CLNS1A-209	ENST00000527299	PAK1	Q13153	545 aa		4.17	□□□□□ -1.74
CLNS1A-209	ENST00000527299	G3BP1	Q13283	466 aa	Known RBP eCLIP	4.17	□□□□□ -1.74
CLNS1A-209	ENST00000527299	ADAM15	Q13444	863 aa		4.17	□□□□□ -1.74
CLNS1A-209	ENST00000527299	POSTN	Q15063	836 aa		4.17	□□□□□ -1.74
CLNS1A-209	ENST00000527299	KBTBD12	Q3ZCT8	623 aa		4.17	□□□□□ -1.74
CLNS1A-209	ENST00000527299	RABL3	Q5HYI8	236 aa		4.17	□□□□□ -1.74
CLNS1A-209	ENST00000527299	ISM2	Q6H9L7	571 aa		4.17	□□□□□ -1.74
CLNS1A-209	ENST00000527299	CPLX2	Q6PUV4	134 aa	Known RBP	4.17	□□□□□ -1.74
CLNS1A-209	ENST00000527299	HTR3D	Q70Z44	454 aa		4.17	□□□□□ -1.74
CLNS1A-209	ENST00000527299	DPH6	Q7L8W6	267 aa		4.17	□□□□□ -1.74
CLNS1A-209	ENST00000527299	FAM114A1	Q8IWE2	563 aa		4.17	□□□□□ -1.74
CLNS1A-209	ENST00000527299	ZNF276	Q8N554	614 aa		4.17	□□□□□ -1.74
CLNS1A-209	ENST00000527299	MAB21L3	Q8N8X9	362 aa		4.17	□□□□□ -1.74
CLNS1A-209	ENST00000527299	WDR48	Q8TAF3	677 aa		4.17	□□□□□ -1.74
CLNS1A-209	ENST00000527299	FAM81A	Q8TBF8	368 aa		4.17	□□□□□ -1.74
CLNS1A-209	ENST00000527299	MORC4	Q8TE76	937 aa		4.17	□□□□□ -1.74
CLNS1A-209	ENST00000527299	PARD3B	Q8TEW8	1205 aa		4.17	□□□□□ -1.74
CLNS1A-209	ENST00000527299	SAAL1	Q96ER3	474 aa		4.17	□□□□□ -1.74
CLNS1A-209	ENST00000527299	DTNBP1	Q96EV8	351 aa		4.17	□□□□□ -1.74
CLNS1A-209	ENST00000527299	MRFAP1L1	Q96HT8	127 aa		4.17	□□□□□ -1.74
CLNS1A-209	ENST00000527299	MLST8	Q9BVC4	326 aa		4.17	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms