RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 APOBEC3FQ8IUX4 373 aaKnown RBP6.22□□□□□ -1.41
SVIP-202ENST00000525670 MAGEB6Q8N7X4 407 aa6.22□□□□□ -1.41
SVIP-202ENST00000525670 ZNF384Q8TF68 577 aa6.22□□□□□ -1.41
SVIP-202ENST00000525670 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.22□□□□□ -1.41
SVIP-202ENST00000525670 TOE1Q96GM8 510 aaKnown RBP6.22□□□□□ -1.41
SVIP-202ENST00000525670 GPR20Q99678 358 aa6.22□□□□□ -1.41
SVIP-202ENST00000525670 GBA2Q9HCG7 927 aaPredicted RBP6.22□□□□□ -1.41
SVIP-202ENST00000525670 CLDND1Q9NY35 253 aa6.22□□□□□ -1.41
SVIP-202ENST00000525670 AATFQ9NY61 560 aaKnown RBP eCLIP6.22□□□□□ -1.41
SVIP-202ENST00000525670 TMOD2Q9NZR1 351 aa6.22□□□□□ -1.41
SVIP-202ENST00000525670 PCDHB4Q9Y5E5 795 aa6.22□□□□□ -1.41
SVIP-202ENST00000525670 MROH7-TTC4A0A0A0MT08 1334 aa6.22□□□□□ -1.41
SVIP-202ENST00000525670 MAST3O60307 1309 aa6.22□□□□□ -1.41
SVIP-202ENST00000525670 CNTNAP1P78357 1384 aa6.21□□□□□ -1.41
SVIP-202ENST00000525670 TCRBV5S2A0A599 114 aa6.21□□□□□ -1.42
SVIP-202ENST00000525670 UBE2Q2LH0YL09 131 aa6.21□□□□□ -1.42
SVIP-202ENST00000525670 RAB11FIP3O75154 756 aa6.21□□□□□ -1.42
SVIP-202ENST00000525670 DGKIO75912 1065 aa6.21□□□□□ -1.42
SVIP-202ENST00000525670 UQCRFS1P1P0C7P4 283 aa6.21□□□□□ -1.42
SVIP-202ENST00000525670 MAP4K2Q12851 820 aa6.21□□□□□ -1.42
SVIP-202ENST00000525670 RASA3Q14644 834 aa6.21□□□□□ -1.42
SVIP-202ENST00000525670 SLC10A6Q3KNW5 377 aa6.21□□□□□ -1.42
SVIP-202ENST00000525670 NAA16Q6N069 864 aaPredicted RBP6.21□□□□□ -1.42
SVIP-202ENST00000525670 APOBEC3HQ6NTF7 200 aaKnown RBP6.21□□□□□ -1.42
SVIP-202ENST00000525670 CDC42EP5Q6NZY7 148 aa6.21□□□□□ -1.42
SVIP-202ENST00000525670 ZFPM1Q8IX07 1006 aa6.21□□□□□ -1.42
SVIP-202ENST00000525670 ARRDC4Q8NCT1 418 aa6.21□□□□□ -1.42
SVIP-202ENST00000525670 SH3RF3Q8TEJ3 882 aaPredicted RBP6.21□□□□□ -1.42
SVIP-202ENST00000525670 KCTD13Q8WZ19 329 aa6.21□□□□□ -1.42
SVIP-202ENST00000525670 ZBED3Q96IU2 234 aaPredicted RBP6.21□□□□□ -1.42
SVIP-202ENST00000525670 LCORQ96JN0 433 aaPredicted RBP6.21□□□□□ -1.42
SVIP-202ENST00000525670 CLMNQ96JQ2 1002 aa6.21□□□□□ -1.42
SVIP-202ENST00000525670 DEFB129Q9H1M3 183 aa6.21□□□□□ -1.42
SVIP-202ENST00000525670 EPB41L1Q9H4G0 881 aa6.21□□□□□ -1.42
SVIP-202ENST00000525670 GPR108Q9NPR9 543 aa6.21□□□□□ -1.42
SVIP-202ENST00000525670 SMPD4Q9NXE4 827 aa6.21□□□□□ -1.42
SVIP-202ENST00000525670 DTLQ9NZJ0 730 aa6.21□□□□□ -1.42
SVIP-202ENST00000525670 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.21□□□□□ -1.42
SVIP-202ENST00000525670 SAP30BPQ9UHR5 308 aaKnown RBP6.21□□□□□ -1.42
SVIP-202ENST00000525670 INVSQ9Y283 1065 aa6.21□□□□□ -1.42
SVIP-202ENST00000525670 MYRFQ9Y2G1 1151 aa6.21□□□□□ -1.42
SVIP-202ENST00000525670 R3HCC1Q9Y3T6 440 aaKnown RBP6.21□□□□□ -1.42
SVIP-202ENST00000525670 A0A1W2PQU0 124 aa6.2□□□□□ -1.42
SVIP-202ENST00000525670 C9orf118A6NHY6 69 aa6.2□□□□□ -1.42
SVIP-202ENST00000525670 INSRRP14616 1297 aa6.2□□□□□ -1.42
SVIP-202ENST00000525670 GRIA2P42262 883 aa6.2□□□□□ -1.42
SVIP-202ENST00000525670 RGS3P49796 1198 aa6.2□□□□□ -1.42
SVIP-202ENST00000525670 FKBP1AP62942 108 aaKnown RBP6.2□□□□□ -1.42
SVIP-202ENST00000525670 PPP2R2AP63151 447 aa6.2□□□□□ -1.42
SVIP-202ENST00000525670 MIGA2Q7L4E1 593 aa6.2□□□□□ -1.42
SVIP-202ENST00000525670 MCF2L2Q86YR7 1114 aa6.2□□□□□ -1.42
SVIP-202ENST00000525670 MAPKAPK5Q8IW41 473 aa6.2□□□□□ -1.42
SVIP-202ENST00000525670 TEX11Q8IYF3 940 aa6.2□□□□□ -1.42
SVIP-202ENST00000525670 ZGPATQ8N5A5 531 aaKnown RBP6.2□□□□□ -1.42
SVIP-202ENST00000525670 PHOSPHO1Q8TCT1 267 aa6.2□□□□□ -1.42
SVIP-202ENST00000525670 NSUN4Q96CB9 384 aaKnown RBP6.2□□□□□ -1.42
SVIP-202ENST00000525670 TINF2Q9BSI4 451 aa6.2□□□□□ -1.42
SVIP-202ENST00000525670 SMOC1Q9H4F8 434 aa6.2□□□□□ -1.42
SVIP-202ENST00000525670 DCTPP1Q9H773 170 aa6.2□□□□□ -1.42
SVIP-202ENST00000525670 DDX4Q9NQI0 724 aaKnown RBP6.2□□□□□ -1.42
SVIP-202ENST00000525670 GPR27Q9NS67 375 aa6.2□□□□□ -1.42
SVIP-202ENST00000525670 BAZ2AQ9UIF9 1905 aaKnown RBP6.2□□□□□ -1.42
SVIP-202ENST00000525670 SALL1Q9NSC2 1324 aa6.2□□□□□ -1.42
SVIP-202ENST00000525670 SIPA1L1O43166 1804 aa6.2□□□□□ -1.42
SVIP-202ENST00000525670 FOCADQ5VW36 1801 aa6.2□□□□□ -1.42
SVIP-202ENST00000525670 MYH1P12882 1939 aa6.19□□□□□ -1.42
SVIP-202ENST00000525670 MAFKO60675 156 aa6.19□□□□□ -1.42
SVIP-202ENST00000525670 CYP7B1O75881 506 aa6.19□□□□□ -1.42
SVIP-202ENST00000525670 LRG1P02750 347 aa6.19□□□□□ -1.42
SVIP-202ENST00000525670 PDE6AP16499 860 aa6.19□□□□□ -1.42
SVIP-202ENST00000525670 ZNF28P17035 718 aa6.19□□□□□ -1.42
SVIP-202ENST00000525670 MX1P20591 662 aa6.19□□□□□ -1.42
SVIP-202ENST00000525670 NF2P35240 595 aa6.19□□□□□ -1.42
SVIP-202ENST00000525670 ADAM17P78536 824 aa6.19□□□□□ -1.42
SVIP-202ENST00000525670 SPTY2D1Q68D10 685 aaPredicted RBP6.19□□□□□ -1.42
SVIP-202ENST00000525670 TEPPQ6URK8 271 aa6.19□□□□□ -1.42
SVIP-202ENST00000525670 C2orf69Q8N8R5 385 aa6.19□□□□□ -1.42
SVIP-202ENST00000525670 GPATCH3Q96I76 525 aa6.19□□□□□ -1.42
SVIP-202ENST00000525670 CAPNS2Q96L46 248 aa6.19□□□□□ -1.42
SVIP-202ENST00000525670 SAMD11Q96NU1 681 aa6.19□□□□□ -1.42
SVIP-202ENST00000525670 CLIC6Q96NY7 704 aa6.19□□□□□ -1.42
SVIP-202ENST00000525670 NOL10Q9BSC4 688 aaKnown RBP6.19□□□□□ -1.42
SVIP-202ENST00000525670 CDIP1Q9H305 208 aa6.19□□□□□ -1.42
SVIP-202ENST00000525670 ARMT1Q9H993 441 aa6.19□□□□□ -1.42
SVIP-202ENST00000525670 PAG1Q9NWQ8 432 aa6.19□□□□□ -1.42
SVIP-202ENST00000525670 PGAP2Q9UHJ9 254 aa6.19□□□□□ -1.42
SVIP-202ENST00000525670 ATAD5Q96QE3 1844 aa6.19□□□□□ -1.42
SVIP-202ENST00000525670 GAKO14976 1311 aa6.19□□□□□ -1.42
SVIP-202ENST00000525670 ZNF532Q9HCE3 1301 aa6.19□□□□□ -1.42
SVIP-202ENST00000525670 DDX60LQ5H9U9 1706 aaKnown RBP6.19□□□□□ -1.42
SVIP-202ENST00000525670 RFX7Q2KHR2 1363 aa6.18□□□□□ -1.42
SVIP-202ENST00000525670 THSD7BQ9C0I4 1608 aa6.18□□□□□ -1.42
SVIP-202ENST00000525670 DDTLA6NHG4 134 aaPredicted RBP6.18□□□□□ -1.42
SVIP-202ENST00000525670 WDHD1O75717 1129 aaPredicted RBP6.18□□□□□ -1.42
SVIP-202ENST00000525670 MBD4O95243 580 aa6.18□□□□□ -1.42
SVIP-202ENST00000525670 CENPBP07199 599 aaPredicted RBP6.18□□□□□ -1.42
SVIP-202ENST00000525670 HSPA1AP0DMV8 641 aaKnown RBP6.18□□□□□ -1.42
SVIP-202ENST00000525670 HSPA1BP0DMV9 641 aaKnown RBP6.18□□□□□ -1.42
SVIP-202ENST00000525670 TNFAIP1Q13829 316 aa6.18□□□□□ -1.42
SVIP-202ENST00000525670 PUM1Q14671 1186 aaKnown RBP eCLIP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms