RNA–Protein interactions for RNA: ENST00000523613.5

HMBOX1-210, Transcript of homeobox containing 1, humanhuman

TSL 1 (best) BASIC

Gene HMBOX1, Length 1,730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-210ENST00000523613 FIGNQ5HY92 759 aa16.35■□□□□ 0.21
HMBOX1-210ENST00000523613 CBWD3Q5JTY5 395 aa16.35■□□□□ 0.21
HMBOX1-210ENST00000523613 CBWD5Q5RIA9 395 aa16.35■□□□□ 0.21
HMBOX1-210ENST00000523613 C1orf220Q5T0J3 134 aa16.35■□□□□ 0.21
HMBOX1-210ENST00000523613 LRRC8AQ8IWT6 810 aa16.35■□□□□ 0.21
HMBOX1-210ENST00000523613 TRPV6Q9H1D0 765 aa16.35■□□□□ 0.21
HMBOX1-210ENST00000523613 AGPAT5Q9NUQ2 364 aa16.35■□□□□ 0.21
HMBOX1-210ENST00000523613 GCNT4Q9P109 453 aa16.35■□□□□ 0.21
HMBOX1-210ENST00000523613 CPSF3Q9UKF6 684 aaKnown RBP16.35■□□□□ 0.21
HMBOX1-210ENST00000523613 NRDCO43847 1150 aa16.34■□□□□ 0.21
HMBOX1-210ENST00000523613 B4GALT4O60513 344 aa16.34■□□□□ 0.21
HMBOX1-210ENST00000523613 MFAP3LO75121 409 aa16.34■□□□□ 0.21
HMBOX1-210ENST00000523613 SGPL1O95470 568 aa16.34■□□□□ 0.21
HMBOX1-210ENST00000523613 CHRNA1P02708 482 aa16.34■□□□□ 0.21
HMBOX1-210ENST00000523613 HOXA11P31270 313 aaPredicted RBP16.34■□□□□ 0.21
HMBOX1-210ENST00000523613 MXI1P50539 228 aa16.34■□□□□ 0.21
HMBOX1-210ENST00000523613 ADKP55263 362 aaKnown RBP16.34■□□□□ 0.21
HMBOX1-210ENST00000523613 OSTNP61366 133 aa16.34■□□□□ 0.21
HMBOX1-210ENST00000523613 MGAT3Q09327 533 aa16.34■□□□□ 0.21
HMBOX1-210ENST00000523613 SURF1Q15526 300 aa16.34■□□□□ 0.21
HMBOX1-210ENST00000523613 SLC27A1Q6PCB7 646 aa16.34■□□□□ 0.21
HMBOX1-210ENST00000523613 ZNF397Q8NF99 534 aaPredicted RBP16.34■□□□□ 0.21
HMBOX1-210ENST00000523613 U2AF1L4Q8WU68 220 aaKnown RBP16.34■□□□□ 0.21
HMBOX1-210ENST00000523613 CACTINQ8WUQ7 758 aaKnown RBP16.34■□□□□ 0.21
HMBOX1-210ENST00000523613 DHX38Q92620 1227 aaKnown RBP16.34■□□□□ 0.21
HMBOX1-210ENST00000523613 ZNF830Q96NB3 372 aaPredicted RBP16.34■□□□□ 0.21
HMBOX1-210ENST00000523613 CRISPLD2Q9H0B8 497 aa16.34■□□□□ 0.21
HMBOX1-210ENST00000523613 RPF1Q9H9Y2 349 aaKnown RBP16.34■□□□□ 0.21
HMBOX1-210ENST00000523613 TMEM8AQ9HCN3 771 aa16.34■□□□□ 0.21
HMBOX1-210ENST00000523613 PDE11AQ9HCR9 933 aa16.34■□□□□ 0.21
HMBOX1-210ENST00000523613 CAPN11Q9UMQ6 739 aa16.34■□□□□ 0.21
HMBOX1-210ENST00000523613 PIN4Q9Y237 131 aaKnown RBP16.34■□□□□ 0.21
HMBOX1-210ENST00000523613 LUC7L2Q9Y383 392 aaKnown RBP16.34■□□□□ 0.21
HMBOX1-210ENST00000523613 NOC2LQ9Y3T9 749 aaKnown RBP16.34■□□□□ 0.21
HMBOX1-210ENST00000523613 A0A1W2PQJ5 194 aa16.33■□□□□ 0.21
HMBOX1-210ENST00000523613 TTC26A0AVF1 554 aa16.33■□□□□ 0.21
HMBOX1-210ENST00000523613 PMM2O15305 246 aa16.33■□□□□ 0.21
HMBOX1-210ENST00000523613 RPS6KA5O75582 802 aa16.33■□□□□ 0.21
HMBOX1-210ENST00000523613 CLTAP09496 248 aa16.33■□□□□ 0.21
HMBOX1-210ENST00000523613 TNNI1P19237 187 aa16.33■□□□□ 0.21
HMBOX1-210ENST00000523613 PON1P27169 355 aa16.33■□□□□ 0.21
HMBOX1-210ENST00000523613 FXR1P51114 621 aaKnown RBP eCLIP16.33■□□□□ 0.21
HMBOX1-210ENST00000523613 GOLGA8FQ08AF8 430 aa16.33■□□□□ 0.21
HMBOX1-210ENST00000523613 GOLGA8DPQ0D2H9 430 aa16.33■□□□□ 0.21
HMBOX1-210ENST00000523613 TRIM71Q2Q1W2 868 aaKnown RBP16.33■□□□□ 0.21
HMBOX1-210ENST00000523613 KRT39Q6A163 491 aa16.33■□□□□ 0.21
HMBOX1-210ENST00000523613 TC2NQ8N9U0 490 aa16.33■□□□□ 0.21
HMBOX1-210ENST00000523613 CCDC51Q96ER9 411 aa16.33■□□□□ 0.21
HMBOX1-210ENST00000523613 POP1Q99575 1024 aaKnown RBP16.33■□□□□ 0.21
HMBOX1-210ENST00000523613 CGRRF1Q99675 332 aa16.33■□□□□ 0.21
HMBOX1-210ENST00000523613 PLCB1Q9NQ66 1216 aa16.33■□□□□ 0.21
HMBOX1-210ENST00000523613 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.33■□□□□ 0.21
HMBOX1-210ENST00000523613 NPTXRO95502 500 aa16.33■□□□□ 0.2
HMBOX1-210ENST00000523613 STAG3L1P0CL83 205 aa16.33■□□□□ 0.2
HMBOX1-210ENST00000523613 SLC9A1P19634 815 aa16.33■□□□□ 0.2
HMBOX1-210ENST00000523613 KRT9P35527 623 aa16.33■□□□□ 0.2
HMBOX1-210ENST00000523613 CDK7P50613 346 aa16.33■□□□□ 0.2
HMBOX1-210ENST00000523613 CLDN10P78369 228 aa16.33■□□□□ 0.2
HMBOX1-210ENST00000523613 POU5F1Q01860 360 aaKnown RBP16.33■□□□□ 0.2
HMBOX1-210ENST00000523613 FAM26DQ5JW98 314 aa16.33■□□□□ 0.2
HMBOX1-210ENST00000523613 FAM228AQ86W67 206 aa16.33■□□□□ 0.2
HMBOX1-210ENST00000523613 CEP120Q8N960 986 aa16.33■□□□□ 0.2
HMBOX1-210ENST00000523613 FAM212AQ96EL1 285 aa16.33■□□□□ 0.2
HMBOX1-210ENST00000523613 PANX2Q96RD6 677 aa16.33■□□□□ 0.2
HMBOX1-210ENST00000523613 EDEM3Q9BZQ6 932 aa16.33■□□□□ 0.2
HMBOX1-210ENST00000523613 TRIM6Q9C030 488 aaPredicted RBP16.33■□□□□ 0.2
HMBOX1-210ENST00000523613 TTYH3Q9C0H2 523 aa16.33■□□□□ 0.2
HMBOX1-210ENST00000523613 TMEM117Q9H0C3 514 aa16.33■□□□□ 0.2
HMBOX1-210ENST00000523613 INTS2Q9H0H0 1204 aaKnown RBP16.33■□□□□ 0.2
HMBOX1-210ENST00000523613 TOPORSQ9NS56 1045 aaPredicted RBP16.33■□□□□ 0.2
HMBOX1-210ENST00000523613 PCNTO95613 3336 aa16.33■□□□□ 0.2
HMBOX1-210ENST00000523613 GPR182O15218 404 aa16.32■□□□□ 0.2
HMBOX1-210ENST00000523613 IL18RAPO95256 599 aa16.32■□□□□ 0.2
HMBOX1-210ENST00000523613 ZBED6P86452 979 aa16.32■□□□□ 0.2
HMBOX1-210ENST00000523613 LRMPQ12912 555 aa16.32■□□□□ 0.2
HMBOX1-210ENST00000523613 ENOX2Q16206 610 aaKnown RBP16.32■□□□□ 0.2
HMBOX1-210ENST00000523613 TSR1Q2NL82 804 aaKnown RBP16.32■□□□□ 0.2
HMBOX1-210ENST00000523613 TRIM65Q6PJ69 517 aa16.32■□□□□ 0.2
HMBOX1-210ENST00000523613 CACNA2D4Q7Z3S7 1137 aa16.32■□□□□ 0.2
HMBOX1-210ENST00000523613 CCDC112Q8NEF3 446 aa16.32■□□□□ 0.2
HMBOX1-210ENST00000523613 CCDC94Q9BW85 323 aaPredicted RBP16.32■□□□□ 0.2
HMBOX1-210ENST00000523613 KCNF1Q9H3M0 494 aa16.32■□□□□ 0.2
HMBOX1-210ENST00000523613 CEP72Q9P209 647 aa16.32■□□□□ 0.2
HMBOX1-210ENST00000523613 EPHB6O15197 1021 aa16.31■□□□□ 0.2
HMBOX1-210ENST00000523613 CXCL8P10145 99 aa16.31■□□□□ 0.2
HMBOX1-210ENST00000523613 ACTN1P12814 892 aa16.31■□□□□ 0.2
HMBOX1-210ENST00000523613 GRM5P41594 1212 aa16.31■□□□□ 0.2
HMBOX1-210ENST00000523613 AP3M2P53677 418 aa16.31■□□□□ 0.2
HMBOX1-210ENST00000523613 WNT7BP56706 349 aa16.31■□□□□ 0.2
HMBOX1-210ENST00000523613 ZNF618Q5T7W0 954 aa16.31■□□□□ 0.2
HMBOX1-210ENST00000523613 WDR49Q8IV35 697 aa16.31■□□□□ 0.2
HMBOX1-210ENST00000523613 EHBP1Q8NDI1 1231 aa16.31■□□□□ 0.2
HMBOX1-210ENST00000523613 ACAP3Q96P50 834 aa16.31■□□□□ 0.2
HMBOX1-210ENST00000523613 ST3GAL5Q9UNP4 418 aa16.31■□□□□ 0.2
HMBOX1-210ENST00000523613 HTTP42858 3142 aa16.31■□□□□ 0.2
HMBOX1-210ENST00000523613 MROH7Q68CQ1 1323 aa16.31■□□□□ 0.2
HMBOX1-210ENST00000523613 RNF225M0QZC1 329 aaPredicted RBP16.31■□□□□ 0.2
HMBOX1-210ENST00000523613 TLR3O15455 904 aaKnown RBP16.31■□□□□ 0.2
HMBOX1-210ENST00000523613 NOL4O94818 638 aa16.31■□□□□ 0.2
HMBOX1-210ENST00000523613 CKBP12277 381 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms