RNA–Protein interactions for RNA: ENST00000523555.5

PABPC1-222, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-222ENST00000523555 LLGL2Q6P1M3 1020 aa10.46□□□□□ -0.73
PABPC1-222ENST00000523555 DYMQ7RTS9 669 aa10.46□□□□□ -0.73
PABPC1-222ENST00000523555 DDX53Q86TM3 631 aaKnown RBP10.46□□□□□ -0.73
PABPC1-222ENST00000523555 RNF168Q8IYW5 571 aaPredicted RBP10.46□□□□□ -0.73
PABPC1-222ENST00000523555 KCTD17Q8N5Z5 321 aa10.46□□□□□ -0.73
PABPC1-222ENST00000523555 KRI1Q8N9T8 703 aaKnown RBP10.46□□□□□ -0.73
PABPC1-222ENST00000523555 SPIRE2Q8WWL2 714 aa10.46□□□□□ -0.73
PABPC1-222ENST00000523555 KHSRPQ92945 711 aaKnown RBP eCLIP10.46□□□□□ -0.735e-10■■□□□ 12.7
PABPC1-222ENST00000523555 B3GALT6Q96L58 329 aa10.46□□□□□ -0.73
PABPC1-222ENST00000523555 TMEM175Q9BSA9 504 aa10.46□□□□□ -0.73
PABPC1-222ENST00000523555 TIPINQ9BVW5 301 aa10.46□□□□□ -0.73
PABPC1-222ENST00000523555 C17orf75Q9HAS0 396 aa10.46□□□□□ -0.73
PABPC1-222ENST00000523555 KCND2Q9NZV8 630 aa10.46□□□□□ -0.73
PABPC1-222ENST00000523555 KANSL3Q9P2N6 904 aa10.46□□□□□ -0.73
PABPC1-222ENST00000523555 PUF60Q9UHX1 559 aaKnown RBP10.46□□□□□ -0.73
PABPC1-222ENST00000523555 TNFSF13BQ9Y275 285 aa10.46□□□□□ -0.73
PABPC1-222ENST00000523555 FAN1Q9Y2M0 1017 aa10.46□□□□□ -0.73
PABPC1-222ENST00000523555 DENND4AQ7Z401 1863 aa10.46□□□□□ -0.74
PABPC1-222ENST00000523555 NCOR1O75376 2440 aa10.46□□□□□ -0.74
PABPC1-222ENST00000523555 DOCK6Q96HP0 2047 aa10.45□□□□□ -0.74
PABPC1-222ENST00000523555 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.45□□□□□ -0.74
PABPC1-222ENST00000523555 SPTLC2O15270 562 aa10.45□□□□□ -0.74
PABPC1-222ENST00000523555 MBTPS2O43462 519 aa10.45□□□□□ -0.74
PABPC1-222ENST00000523555 CLASP2O75122 1294 aaKnown RBP10.45□□□□□ -0.74
PABPC1-222ENST00000523555 CXCL14O95715 111 aa10.45□□□□□ -0.74
PABPC1-222ENST00000523555 ALDH2P05091 517 aa10.45□□□□□ -0.74
PABPC1-222ENST00000523555 CTSAP10619 480 aa10.45□□□□□ -0.74
PABPC1-222ENST00000523555 HARSP12081 509 aaKnown RBP10.45□□□□□ -0.74
PABPC1-222ENST00000523555 DNM1Q05193 864 aaKnown RBP10.45□□□□□ -0.74
PABPC1-222ENST00000523555 GRIK3Q13003 919 aa10.45□□□□□ -0.74
PABPC1-222ENST00000523555 SMC1AQ14683 1233 aaKnown RBP10.45□□□□□ -0.74
PABPC1-222ENST00000523555 PTPN14Q15678 1187 aa10.45□□□□□ -0.74
PABPC1-222ENST00000523555 DCAF4L1Q3SXM0 396 aa10.45□□□□□ -0.74
PABPC1-222ENST00000523555 ZNF568Q3ZCX4 644 aa10.45□□□□□ -0.74
PABPC1-222ENST00000523555 AXDND1Q5T1B0 1012 aaPredicted RBP10.45□□□□□ -0.74
PABPC1-222ENST00000523555 KANK3Q6NY19 840 aa10.45□□□□□ -0.74
PABPC1-222ENST00000523555 SLC39A4Q6P5W5 647 aa10.45□□□□□ -0.74
PABPC1-222ENST00000523555 SHC4Q6S5L8 630 aa10.45□□□□□ -0.74
PABPC1-222ENST00000523555 HAUS6Q7Z4H7 955 aa10.45□□□□□ -0.74
PABPC1-222ENST00000523555 MYCT1Q8N699 235 aa10.45□□□□□ -0.74
PABPC1-222ENST00000523555 PDILTQ8N807 584 aa10.45□□□□□ -0.74
PABPC1-222ENST00000523555 MRPL43Q8N983 215 aaKnown RBP10.45□□□□□ -0.74
PABPC1-222ENST00000523555 HASPINQ8TF76 798 aa10.45□□□□□ -0.74
PABPC1-222ENST00000523555 RSPH1Q8WYR4 309 aa10.45□□□□□ -0.74
PABPC1-222ENST00000523555 STAMQ92783 540 aa10.45□□□□□ -0.74
PABPC1-222ENST00000523555 DNAJC19Q96DA6 116 aa10.45□□□□□ -0.74
PABPC1-222ENST00000523555 ZMAT2Q96NC0 199 aaKnown RBP10.45□□□□□ -0.74
PABPC1-222ENST00000523555 RPS6KC1Q96S38 1066 aa10.45□□□□□ -0.74
PABPC1-222ENST00000523555 ADPGKQ9BRR6 497 aa10.45□□□□□ -0.74
PABPC1-222ENST00000523555 APOL5Q9BWW9 433 aa10.45□□□□□ -0.74
PABPC1-222ENST00000523555 MRPL4Q9BYD3 311 aaKnown RBP10.45□□□□□ -0.74
PABPC1-222ENST00000523555 FGFBP2Q9BYJ0 223 aa10.45□□□□□ -0.74
PABPC1-222ENST00000523555 GPR62Q9BZJ7 368 aa10.45□□□□□ -0.74
PABPC1-222ENST00000523555 ZHX3Q9H4I2 956 aa10.45□□□□□ -0.74
PABPC1-222ENST00000523555 GOLGA2P5Q9HBQ8 144 aa10.45□□□□□ -0.74
PABPC1-222ENST00000523555 NGRNQ9NPE2 291 aaKnown RBP10.45□□□□□ -0.74
PABPC1-222ENST00000523555 ANKFY1Q9P2R3 1169 aa10.45□□□□□ -0.74
PABPC1-222ENST00000523555 ODF2LQ9ULJ1 636 aa10.45□□□□□ -0.74
PABPC1-222ENST00000523555 HCFC2Q9Y5Z7 792 aa10.45□□□□□ -0.74
PABPC1-222ENST00000523555 ZMYM2Q9UBW7 1377 aa10.44□□□□□ -0.74
PABPC1-222ENST00000523555 TISP43B9A030 160 aa10.44□□□□□ -0.74
PABPC1-222ENST00000523555 K7ENM7 598 aa10.44□□□□□ -0.74
PABPC1-222ENST00000523555 C2CD2LO14523 706 aa10.44□□□□□ -0.74
PABPC1-222ENST00000523555 LILRB3O75022 631 aa10.44□□□□□ -0.74
PABPC1-222ENST00000523555 PPP6R2O75170 966 aa10.44□□□□□ -0.74
PABPC1-222ENST00000523555 FAM13AO94988 1023 aa10.44□□□□□ -0.74
PABPC1-222ENST00000523555 KIF4AO95239 1232 aa10.44□□□□□ -0.74
PABPC1-222ENST00000523555 YEATS4O95619 227 aa10.44□□□□□ -0.74
PABPC1-222ENST00000523555 BRD1O95696 1058 aa10.44□□□□□ -0.74
PABPC1-222ENST00000523555 EPCAMP16422 314 aa10.44□□□□□ -0.74
PABPC1-222ENST00000523555 GRM5P41594 1212 aa10.44□□□□□ -0.74
PABPC1-222ENST00000523555 SOX4Q06945 474 aaPredicted RBP10.44□□□□□ -0.74
PABPC1-222ENST00000523555 E2F4Q16254 413 aa10.44□□□□□ -0.74
PABPC1-222ENST00000523555 ZC2HC1CQ53FD0 456 aaPredicted RBP10.44□□□□□ -0.74
PABPC1-222ENST00000523555 ZBTB41Q5SVQ8 909 aa10.44□□□□□ -0.74
PABPC1-222ENST00000523555 RRAGBQ5VZM2 374 aa10.44□□□□□ -0.74
PABPC1-222ENST00000523555 PDE12Q6L8Q7 609 aaKnown RBP10.44□□□□□ -0.74
PABPC1-222ENST00000523555 SYCE2Q6PIF2 218 aa10.44□□□□□ -0.74
PABPC1-222ENST00000523555 MPZL3Q6UWV2 235 aa10.44□□□□□ -0.74
PABPC1-222ENST00000523555 CD300LGQ6UXG3 332 aa10.44□□□□□ -0.74
PABPC1-222ENST00000523555 SFR1Q86XK3 245 aa10.44□□□□□ -0.74
PABPC1-222ENST00000523555 FAM178BQ8IXR5 827 aa10.44□□□□□ -0.74
PABPC1-222ENST00000523555 HACE1Q8IYU2 909 aa10.44□□□□□ -0.74
PABPC1-222ENST00000523555 SMRP1Q8NCR6 262 aa10.44□□□□□ -0.74
PABPC1-222ENST00000523555 DDX12PQ92771 950 aa10.44□□□□□ -0.74
PABPC1-222ENST00000523555 PPP1R10Q96QC0 940 aaKnown RBP10.44□□□□□ -0.74
PABPC1-222ENST00000523555 HERC2P3Q9BVR0 1158 aa10.44□□□□□ -0.74
PABPC1-222ENST00000523555 PARVGQ9HBI0 331 aa10.44□□□□□ -0.74
PABPC1-222ENST00000523555 LARSQ9P2J5 1176 aaKnown RBP10.44□□□□□ -0.74
PABPC1-222ENST00000523555 STK17AQ9UEE5 414 aa10.44□□□□□ -0.74
PABPC1-222ENST00000523555 CCDC39Q9UFE4 941 aa10.44□□□□□ -0.74
PABPC1-222ENST00000523555 CD207Q9UJ71 328 aa10.44□□□□□ -0.74
PABPC1-222ENST00000523555 RBM19Q9Y4C8 960 aaKnown RBP10.44□□□□□ -0.74
PABPC1-222ENST00000523555 ANKRD63C9JTQ0 380 aa10.43□□□□□ -0.74
PABPC1-222ENST00000523555 TNFRSF10AO00220 468 aa10.43□□□□□ -0.74
PABPC1-222ENST00000523555 NCK2O43639 380 aa10.43□□□□□ -0.74
PABPC1-222ENST00000523555 TRAK2O60296 914 aa10.43□□□□□ -0.74
PABPC1-222ENST00000523555 FAM189A1O60320 539 aa10.43□□□□□ -0.74
PABPC1-222ENST00000523555 SOD2P04179 222 aa10.43□□□□□ -0.74
PABPC1-222ENST00000523555 KRT18P05783 430 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms