RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 ARHGAP29Q52LW3 1261 aa7.48□□□□□ -1.21
CSMD1-211ENST00000523062 C4orf17Q53FE4 359 aa7.48□□□□□ -1.21
CSMD1-211ENST00000523062 GNASQ5JWF2 1037 aa7.48□□□□□ -1.21
CSMD1-211ENST00000523062 TCERG1LQ5VWI1 586 aa7.48□□□□□ -1.21
CSMD1-211ENST00000523062 TRIM65Q6PJ69 517 aa7.48□□□□□ -1.21
CSMD1-211ENST00000523062 WDR59Q6PJI9 974 aa7.48□□□□□ -1.21
CSMD1-211ENST00000523062 METTL7BQ6UX53 244 aa7.48□□□□□ -1.21
CSMD1-211ENST00000523062 GBP6Q6ZN66 633 aa7.48□□□□□ -1.21
CSMD1-211ENST00000523062 RRAGAQ7L523 313 aa7.48□□□□□ -1.21
CSMD1-211ENST00000523062 HAUS6Q7Z4H7 955 aa7.48□□□□□ -1.21
CSMD1-211ENST00000523062 KSR1Q8IVT5 923 aa7.48□□□□□ -1.21
CSMD1-211ENST00000523062 ACRBPQ8NEB7 543 aa7.48□□□□□ -1.21
CSMD1-211ENST00000523062 GPRC5AQ8NFJ5 357 aa7.48□□□□□ -1.21
CSMD1-211ENST00000523062 MORC4Q8TE76 937 aa7.48□□□□□ -1.21
CSMD1-211ENST00000523062 TMEM174Q8WUU8 243 aa7.48□□□□□ -1.21
CSMD1-211ENST00000523062 SYN2Q92777 582 aaPredicted RBP7.48□□□□□ -1.21
CSMD1-211ENST00000523062 SLC35C1Q96A29 364 aa7.48□□□□□ -1.21
CSMD1-211ENST00000523062 FAM167AQ96KS9 214 aa7.48□□□□□ -1.21
CSMD1-211ENST00000523062 IFT74Q96LB3 600 aa7.48□□□□□ -1.21
CSMD1-211ENST00000523062 FGD4Q96M96 766 aa7.48□□□□□ -1.21
CSMD1-211ENST00000523062 EIF3CQ99613 913 aaKnown RBP7.48□□□□□ -1.21
CSMD1-211ENST00000523062 CHP1Q99653 195 aa7.48□□□□□ -1.21
CSMD1-211ENST00000523062 GANQ9H2C0 597 aa7.48□□□□□ -1.21
CSMD1-211ENST00000523062 CRISPLD1Q9H336 500 aa7.48□□□□□ -1.21
CSMD1-211ENST00000523062 PLCB1Q9NQ66 1216 aa7.48□□□□□ -1.21
CSMD1-211ENST00000523062 GPRC5CQ9NQ84 441 aa7.48□□□□□ -1.21
CSMD1-211ENST00000523062 CYP26B1Q9NR63 512 aa7.48□□□□□ -1.21
CSMD1-211ENST00000523062 MYO1AQ9UBC5 1043 aa7.48□□□□□ -1.21
CSMD1-211ENST00000523062 DNAI1Q9UI46 699 aa7.48□□□□□ -1.21
CSMD1-211ENST00000523062 KCNG1Q9UIX4 513 aa7.48□□□□□ -1.21
CSMD1-211ENST00000523062 PLAGL2Q9UPG8 496 aa7.48□□□□□ -1.21
CSMD1-211ENST00000523062 DAAM1Q9Y4D1 1078 aa7.48□□□□□ -1.21
CSMD1-211ENST00000523062 MAFBQ9Y5Q3 323 aaPredicted RBP7.48□□□□□ -1.21
CSMD1-211ENST00000523062 EPN1Q9Y6I3 576 aaPredicted RBP7.48□□□□□ -1.21
CSMD1-211ENST00000523062 MYH11P35749 1972 aa7.48□□□□□ -1.21
CSMD1-211ENST00000523062 IGKV6D-21A0A0A0MT36 114 aa7.47□□□□□ -1.21
CSMD1-211ENST00000523062 SSU72P8A0A1W2PR75 194 aa7.47□□□□□ -1.21
CSMD1-211ENST00000523062 LRRC53A6NM62 1247 aa7.47□□□□□ -1.21
CSMD1-211ENST00000523062 CCDC169A6NNP5 214 aa7.47□□□□□ -1.21
CSMD1-211ENST00000523062 ZBBXA8MT70 800 aa7.47□□□□□ -1.21
CSMD1-211ENST00000523062 BTBD19C9JJ37 291 aa7.47□□□□□ -1.21
CSMD1-211ENST00000523062 MAPK13O15264 365 aa7.47□□□□□ -1.21
CSMD1-211ENST00000523062 SORBS3O60504 671 aa7.47□□□□□ -1.21
CSMD1-211ENST00000523062 EXOC3O60645 756 aa7.47□□□□□ -1.21
CSMD1-211ENST00000523062 N4BP1O75113 896 aaKnown RBP7.47□□□□□ -1.21
CSMD1-211ENST00000523062 NOL4O94818 638 aa7.47□□□□□ -1.21
CSMD1-211ENST00000523062 CELF2O95319 508 aaKnown RBP7.47□□□□□ -1.21
CSMD1-211ENST00000523062 GGPS1O95749 300 aa7.47□□□□□ -1.21
CSMD1-211ENST00000523062 PGK2P07205 417 aa7.47□□□□□ -1.21
CSMD1-211ENST00000523062 H2AFB1P0C5Y9 115 aa7.47□□□□□ -1.21
CSMD1-211ENST00000523062 H2AFB2P0C5Z0 115 aa7.47□□□□□ -1.21
CSMD1-211ENST00000523062 ZBTB48P10074 688 aaPredicted RBP7.47□□□□□ -1.21
CSMD1-211ENST00000523062 CYP2C8P10632 490 aa7.47□□□□□ -1.21
CSMD1-211ENST00000523062 KRT13P13646 458 aa7.47□□□□□ -1.21
CSMD1-211ENST00000523062 CASQ1P31415 396 aa7.47□□□□□ -1.21
CSMD1-211ENST00000523062 RFC5P40937 340 aa7.47□□□□□ -1.21
CSMD1-211ENST00000523062 NPTX2P47972 431 aa7.47□□□□□ -1.21
CSMD1-211ENST00000523062 POLGP54098 1239 aaPredicted RBP7.47□□□□□ -1.21
CSMD1-211ENST00000523062 FSTL1Q12841 308 aa7.47□□□□□ -1.21
CSMD1-211ENST00000523062 EMC2Q15006 297 aa7.47□□□□□ -1.21
CSMD1-211ENST00000523062 SPA17Q15506 151 aa7.47□□□□□ -1.21
CSMD1-211ENST00000523062 MTERF2Q49AM1 385 aa7.47□□□□□ -1.21
CSMD1-211ENST00000523062 SFMBT2Q5VUG0 894 aa7.47□□□□□ -1.21
CSMD1-211ENST00000523062 ZNF662Q6ZS27 426 aa7.47□□□□□ -1.21
CSMD1-211ENST00000523062 INTS8Q75QN2 995 aaKnown RBP7.47□□□□□ -1.21
CSMD1-211ENST00000523062 TRMT1LQ7Z2T5 733 aaKnown RBP7.47□□□□□ -1.21
CSMD1-211ENST00000523062 MAP4K3Q8IVH8 894 aa7.47□□□□□ -1.21
CSMD1-211ENST00000523062 ABRAQ8N0Z2 381 aa7.47□□□□□ -1.21
CSMD1-211ENST00000523062 TXLNBQ8N3L3 684 aa7.47□□□□□ -1.21
CSMD1-211ENST00000523062 XXYLT1Q8NBI6 393 aa7.47□□□□□ -1.21
CSMD1-211ENST00000523062 TMEM161BQ8NDZ6 487 aa7.47□□□□□ -1.21
CSMD1-211ENST00000523062 AFAP1L1Q8TED9 768 aa7.47□□□□□ -1.21
CSMD1-211ENST00000523062 ZNF526Q8TF50 670 aaPredicted RBP7.47□□□□□ -1.21
CSMD1-211ENST00000523062 BRI3BPQ8WY22 251 aa7.47□□□□□ -1.21
CSMD1-211ENST00000523062 SEPT1Q8WYJ6 367 aa7.47□□□□□ -1.21
CSMD1-211ENST00000523062 BORCS6Q96GS4 357 aa7.47□□□□□ -1.21
CSMD1-211ENST00000523062 CCDC42Q96M95 316 aa7.47□□□□□ -1.21
CSMD1-211ENST00000523062 PARK7Q99497 189 aaKnown RBP7.47□□□□□ -1.21
CSMD1-211ENST00000523062 SH2D3AQ9BRG2 576 aa7.47□□□□□ -1.21
CSMD1-211ENST00000523062 CRACR2AQ9BSW2 395 aa7.47□□□□□ -1.21
CSMD1-211ENST00000523062 NIFKQ9BYG3 293 aaKnown RBP7.47□□□□□ -1.21
CSMD1-211ENST00000523062 POLR3FQ9H1D9 316 aaPredicted RBP7.47□□□□□ -1.21
CSMD1-211ENST00000523062 DEF6Q9H4E7 631 aa7.47□□□□□ -1.21
CSMD1-211ENST00000523062 HAUS4Q9H6D7 363 aa7.47□□□□□ -1.21
CSMD1-211ENST00000523062 L2HGDHQ9H9P8 463 aa7.47□□□□□ -1.21
CSMD1-211ENST00000523062 NHEJ1Q9H9Q4 299 aaPredicted RBP7.47□□□□□ -1.21
CSMD1-211ENST00000523062 MLXIPQ9HAP2 919 aa7.47□□□□□ -1.21
CSMD1-211ENST00000523062 LZTFL1Q9NQ48 299 aa7.47□□□□□ -1.21
CSMD1-211ENST00000523062 KMT5AQ9NQR1 393 aa7.47□□□□□ -1.21
CSMD1-211ENST00000523062 XPNPEP1Q9NQW7 623 aa7.47□□□□□ -1.21
CSMD1-211ENST00000523062 PDLIM7Q9NR12 457 aa7.47□□□□□ -1.21
CSMD1-211ENST00000523062 GCNT4Q9P109 453 aa7.47□□□□□ -1.21
CSMD1-211ENST00000523062 MORF4L1Q9UBU8 362 aa7.47□□□□□ -1.21
CSMD1-211ENST00000523062 FBXL5Q9UKA1 691 aa7.47□□□□□ -1.21
CSMD1-211ENST00000523062 HCN2Q9UL51 889 aa7.47□□□□□ -1.21
CSMD1-211ENST00000523062 MYO6Q9UM54 1294 aa7.47□□□□□ -1.21
CSMD1-211ENST00000523062 ARID2Q68CP9 1835 aa7.47□□□□□ -1.21
CSMD1-211ENST00000523062 GSTTP1A0A1W2PQM5 241 aa7.46□□□□□ -1.22
CSMD1-211ENST00000523062 DENND3A2RUS2 1198 aa7.46□□□□□ -1.22
CSMD1-211ENST00000523062 NOP56O00567 594 aaKnown RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms