RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 ZBP1Q9H171 429 aa10.36□□□□□ -0.75
CLK4-209ENST00000521621 PANK4Q9NVE7 773 aa10.36□□□□□ -0.75
CLK4-209ENST00000521621 LILRB3O75022 631 aa10.36□□□□□ -0.75
CLK4-209ENST00000521621 ALDH2P05091 517 aa10.36□□□□□ -0.75
CLK4-209ENST00000521621 RPL9P32969 192 aaKnown RBP10.36□□□□□ -0.75
CLK4-209ENST00000521621 ENPEPQ07075 957 aa10.36□□□□□ -0.75
CLK4-209ENST00000521621 BMS1Q14692 1282 aaKnown RBP10.36□□□□□ -0.75
CLK4-209ENST00000521621 ZRSR1Q15695 479 aaKnown RBP10.36□□□□□ -0.75
CLK4-209ENST00000521621 COBLL1Q53SF7 1204 aa10.36□□□□□ -0.75
CLK4-209ENST00000521621 PDXDC1Q6P996 788 aa10.36□□□□□ -0.75
CLK4-209ENST00000521621 SPRED2Q7Z698 418 aa10.36□□□□□ -0.75
CLK4-209ENST00000521621 EFHBQ8N7U6 833 aa10.36□□□□□ -0.75
CLK4-209ENST00000521621 LPPQ93052 612 aa10.36□□□□□ -0.75
CLK4-209ENST00000521621 KIFC3Q9BVG8 833 aa10.36□□□□□ -0.75
CLK4-209ENST00000521621 RNF39Q9H2S5 420 aa10.36□□□□□ -0.75
CLK4-209ENST00000521621 K7ENM7 598 aa10.35□□□□□ -0.75
CLK4-209ENST00000521621 PTGESO14684 152 aa10.35□□□□□ -0.75
CLK4-209ENST00000521621 OGTO15294 1046 aa10.35□□□□□ -0.75
CLK4-209ENST00000521621 DDHD2O94830 711 aa10.35□□□□□ -0.75
CLK4-209ENST00000521621 CTSAP10619 480 aa10.35□□□□□ -0.75
CLK4-209ENST00000521621 PFKFB1P16118 471 aa10.35□□□□□ -0.75
CLK4-209ENST00000521621 YARSP54577 528 aaKnown RBP10.35□□□□□ -0.75
CLK4-209ENST00000521621 SMC1AQ14683 1233 aaKnown RBP10.35□□□□□ -0.75
CLK4-209ENST00000521621 ZBTB6Q15916 424 aa10.35□□□□□ -0.75
CLK4-209ENST00000521621 AAK1Q2M2I8 961 aa10.35□□□□□ -0.75
CLK4-209ENST00000521621 ZNF568Q3ZCX4 644 aa10.35□□□□□ -0.75
CLK4-209ENST00000521621 PAN2Q504Q3 1202 aaKnown RBP10.35□□□□□ -0.75
CLK4-209ENST00000521621 RTL10Q7L3V2 364 aa10.35□□□□□ -0.75
CLK4-209ENST00000521621 SFR1Q86XK3 245 aa10.35□□□□□ -0.75
CLK4-209ENST00000521621 POF1BQ8WVV4 589 aa10.35□□□□□ -0.75
CLK4-209ENST00000521621 FAM161BQ96MY7 647 aa10.35□□□□□ -0.75
CLK4-209ENST00000521621 TARS2Q9BW92 718 aaKnown RBP10.35□□□□□ -0.75
CLK4-209ENST00000521621 RXFP1Q9HBX9 757 aa10.35□□□□□ -0.75
CLK4-209ENST00000521621 TBC1D7Q9P0N9 293 aa10.35□□□□□ -0.75
CLK4-209ENST00000521621 ANK1P16157 1881 aa10.35□□□□□ -0.75
CLK4-209ENST00000521621 MEIS3P2A8K0S8 358 aa10.35□□□□□ -0.75
CLK4-209ENST00000521621 POLR2DO15514 142 aaKnown RBP10.35□□□□□ -0.75
CLK4-209ENST00000521621 CLDN3O15551 220 aa10.35□□□□□ -0.75
CLK4-209ENST00000521621 RECQL4O94761 1208 aa10.35□□□□□ -0.75
CLK4-209ENST00000521621 LDHAP00338 332 aaKnown RBP10.35□□□□□ -0.75
CLK4-209ENST00000521621 THP07101 528 aa10.35□□□□□ -0.75
CLK4-209ENST00000521621 DNAJB1P25685 340 aa10.35□□□□□ -0.75
CLK4-209ENST00000521621 SLC11A1P49279 550 aa10.35□□□□□ -0.75
CLK4-209ENST00000521621 ELAVL2Q12926 359 aaKnown RBP10.35□□□□□ -0.75
CLK4-209ENST00000521621 NFIL3Q16649 462 aa10.35□□□□□ -0.75
CLK4-209ENST00000521621 DUSP6Q16828 381 aa10.35□□□□□ -0.75
CLK4-209ENST00000521621 LEXMQ3ZCV2 418 aa10.35□□□□□ -0.75
CLK4-209ENST00000521621 SLC39A4Q6P5W5 647 aa10.35□□□□□ -0.75
CLK4-209ENST00000521621 CEP57L1Q8IYX8 460 aa10.35□□□□□ -0.75
CLK4-209ENST00000521621 CCDC34Q96HJ3 373 aa10.35□□□□□ -0.75
CLK4-209ENST00000521621 ACAP3Q96P50 834 aa10.35□□□□□ -0.75
CLK4-209ENST00000521621 GAD1Q99259 594 aa10.35□□□□□ -0.75
CLK4-209ENST00000521621 CHST7Q9NS84 486 aa10.35□□□□□ -0.75
CLK4-209ENST00000521621 MARCH5Q9NX47 278 aa10.35□□□□□ -0.75
CLK4-209ENST00000521621 MIOSQ9NXC5 875 aa10.35□□□□□ -0.75
CLK4-209ENST00000521621 CHMP5Q9NZZ3 219 aa10.35□□□□□ -0.75
CLK4-209ENST00000521621 FNIP2Q9P278 1114 aa10.35□□□□□ -0.75
CLK4-209ENST00000521621 CPSF3Q9UKF6 684 aaKnown RBP10.35□□□□□ -0.75
CLK4-209ENST00000521621 TCHHQ07283 1943 aa10.35□□□□□ -0.75
CLK4-209ENST00000521621 SFI1A8K8P3 1242 aa10.34□□□□□ -0.75
CLK4-209ENST00000521621 SOD2P04179 222 aa10.34□□□□□ -0.75
CLK4-209ENST00000521621 MLH1P40692 756 aa10.34□□□□□ -0.75
CLK4-209ENST00000521621 COASYQ13057 564 aa10.34□□□□□ -0.75
CLK4-209ENST00000521621 ADAM15Q13444 863 aa10.34□□□□□ -0.75
CLK4-209ENST00000521621 MYBPC2Q14324 1141 aa10.34□□□□□ -0.75
CLK4-209ENST00000521621 KCNB1Q14721 858 aa10.34□□□□□ -0.75
CLK4-209ENST00000521621 THNSL1Q8IYQ7 743 aa10.34□□□□□ -0.75
CLK4-209ENST00000521621 FAM193BQ96PV7 902 aaPredicted RBP10.34□□□□□ -0.75
CLK4-209ENST00000521621 OXCT2Q9BYC2 517 aaPredicted RBP10.34□□□□□ -0.75
CLK4-209ENST00000521621 ASB7Q9H672 318 aa10.34□□□□□ -0.75
CLK4-209ENST00000521621 SNTG2Q9NY99 539 aa10.34□□□□□ -0.75
CLK4-209ENST00000521621 FAN1Q9Y2M0 1017 aa10.34□□□□□ -0.75
CLK4-209ENST00000521621 TTC26A0AVF1 554 aa10.34□□□□□ -0.75
CLK4-209ENST00000521621 RFXAPO00287 272 aa10.34□□□□□ -0.75
CLK4-209ENST00000521621 NRP1O14786 923 aa10.34□□□□□ -0.75
CLK4-209ENST00000521621 POU2F2P09086 479 aa10.34□□□□□ -0.75
CLK4-209ENST00000521621 LRPAP1P30533 357 aa10.34□□□□□ -0.75
CLK4-209ENST00000521621 LIG4P49917 911 aa10.34□□□□□ -0.75
CLK4-209ENST00000521621 DCLRE1AQ6PJP8 1040 aa10.34□□□□□ -0.75
CLK4-209ENST00000521621 CYP26C1Q6V0L0 522 aa10.34□□□□□ -0.75
CLK4-209ENST00000521621 ZNF280BQ86YH2 543 aa10.34□□□□□ -0.75
CLK4-209ENST00000521621 MRPL43Q8N983 215 aaKnown RBP10.34□□□□□ -0.75
CLK4-209ENST00000521621 SPRYD3Q8NCJ5 442 aa10.34□□□□□ -0.75
CLK4-209ENST00000521621 DHX58Q96C10 678 aa10.34□□□□□ -0.75
CLK4-209ENST00000521621 PAGE5Q96GU1 130 aa10.34□□□□□ -0.75
CLK4-209ENST00000521621 RPS6KC1Q96S38 1066 aa10.34□□□□□ -0.75
CLK4-209ENST00000521621 HAPLN2Q9GZV7 340 aa10.34□□□□□ -0.75
CLK4-209ENST00000521621 KIAA1586Q9HCI6 787 aa10.34□□□□□ -0.75
CLK4-209ENST00000521621 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.34□□□□□ -0.75
CLK4-209ENST00000521621 THEGQ9P2T0 379 aa10.34□□□□□ -0.75
CLK4-209ENST00000521621 MAFFQ9ULX9 164 aa10.34□□□□□ -0.75
CLK4-209ENST00000521621 CITO14578 2027 aa10.33□□□□□ -0.76
CLK4-209ENST00000521621 KLRC4O43908 158 aa10.33□□□□□ -0.76
CLK4-209ENST00000521621 IL18RAPO95256 599 aa10.33□□□□□ -0.76
CLK4-209ENST00000521621 ANP32AP39687 249 aaKnown RBP10.33□□□□□ -0.76
CLK4-209ENST00000521621 RNASELQ05823 741 aaKnown RBP10.33□□□□□ -0.76
CLK4-209ENST00000521621 PPFIBP1Q86W92 1011 aa10.33□□□□□ -0.76
CLK4-209ENST00000521621 ENGASEQ8NFI3 743 aa10.33□□□□□ -0.76
CLK4-209ENST00000521621 TMEM169Q96HH4 297 aa10.33□□□□□ -0.76
CLK4-209ENST00000521621 MRPL44Q9H9J2 332 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms