RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 AFF1P51825 1210 aaKnown RBP12.96□□□□□ -0.33
HPS4-218ENST00000519774 KCNA1Q09470 495 aa12.96□□□□□ -0.33
HPS4-218ENST00000519774 SNW1Q13573 536 aaKnown RBP12.96□□□□□ -0.33
HPS4-218ENST00000519774 GSE1Q14687 1217 aa12.96□□□□□ -0.33
HPS4-218ENST00000519774 POSTNQ15063 836 aa12.96□□□□□ -0.33
HPS4-218ENST00000519774 KMT5BQ4FZB7 885 aa12.96□□□□□ -0.33
HPS4-218ENST00000519774 SEZ6Q53EL9 994 aa12.96□□□□□ -0.33
HPS4-218ENST00000519774 KANK3Q6NY19 840 aa12.96□□□□□ -0.33
HPS4-218ENST00000519774 SLC39A4Q6P5W5 647 aa12.96□□□□□ -0.33
HPS4-218ENST00000519774 SYCP3Q8IZU3 236 aa12.96□□□□□ -0.33
HPS4-218ENST00000519774 KCNN1Q92952 543 aa12.96□□□□□ -0.33
HPS4-218ENST00000519774 CLP1Q92989 425 aaKnown RBP12.96□□□□□ -0.33
HPS4-218ENST00000519774 CDX2Q99626 313 aaPredicted RBP12.96□□□□□ -0.33
HPS4-218ENST00000519774 CCDC94Q9BW85 323 aaPredicted RBP12.96□□□□□ -0.33
HPS4-218ENST00000519774 STRA6Q9BX79 667 aa12.96□□□□□ -0.33
HPS4-218ENST00000519774 CWH43Q9H720 699 aa12.96□□□□□ -0.33
HPS4-218ENST00000519774 SLC39A2Q9NP94 309 aa12.96□□□□□ -0.33
HPS4-218ENST00000519774 EXOC7Q9UPT5 735 aa12.96□□□□□ -0.33
HPS4-218ENST00000519774 GIT1Q9Y2X7 761 aa12.96□□□□□ -0.33
HPS4-218ENST00000519774 CHD9Q3L8U1 2897 aa12.95□□□□□ -0.34
HPS4-218ENST00000519774 ANKRD63C9JTQ0 380 aa12.95□□□□□ -0.34
HPS4-218ENST00000519774 CSPG5O95196 566 aa12.95□□□□□ -0.34
HPS4-218ENST00000519774 LAG3P18627 525 aa12.95□□□□□ -0.34
HPS4-218ENST00000519774 GRM5P41594 1212 aa12.95□□□□□ -0.34
HPS4-218ENST00000519774 YARSP54577 528 aaKnown RBP12.95□□□□□ -0.34
HPS4-218ENST00000519774 UBE2HP62256 183 aa12.95□□□□□ -0.34
HPS4-218ENST00000519774 MCL1Q07820 350 aa12.95□□□□□ -0.34
HPS4-218ENST00000519774 EHHADHQ08426 723 aa12.95□□□□□ -0.34
HPS4-218ENST00000519774 DPYDQ12882 1025 aa12.95□□□□□ -0.34
HPS4-218ENST00000519774 GPM6BQ13491 265 aa12.95□□□□□ -0.34
HPS4-218ENST00000519774 PNOCQ13519 176 aa12.95□□□□□ -0.34
HPS4-218ENST00000519774 COLGALT1Q8NBJ5 622 aa12.95□□□□□ -0.34
HPS4-218ENST00000519774 RSPH1Q8WYR4 309 aa12.95□□□□□ -0.34
HPS4-218ENST00000519774 CCDC47Q96A33 483 aaKnown RBP12.95□□□□□ -0.34
HPS4-218ENST00000519774 ZNF558Q96NG5 402 aa12.95□□□□□ -0.34
HPS4-218ENST00000519774 GBP4Q96PP9 640 aa12.95□□□□□ -0.34
HPS4-218ENST00000519774 GAS2L1Q99501 681 aaPredicted RBP12.95□□□□□ -0.34
HPS4-218ENST00000519774 MSTO1Q9BUK6 570 aa12.95□□□□□ -0.34
HPS4-218ENST00000519774 HAPLN2Q9GZV7 340 aa12.95□□□□□ -0.34
HPS4-218ENST00000519774 AAASQ9NRG9 546 aa12.95□□□□□ -0.34
HPS4-218ENST00000519774 PCDHB12Q9Y5F1 795 aa12.95□□□□□ -0.34
HPS4-218ENST00000519774 CITO14578 2027 aa12.95□□□□□ -0.34
HPS4-218ENST00000519774 TRIP11Q15643 1979 aa12.94□□□□□ -0.34
HPS4-218ENST00000519774 EIF3DO15371 548 aaKnown RBP eCLIP12.94□□□□□ -0.34
HPS4-218ENST00000519774 B4GALT3O60512 393 aa12.94□□□□□ -0.34
HPS4-218ENST00000519774 IGFBP4P22692 258 aa12.94□□□□□ -0.34
HPS4-218ENST00000519774 GLRA4Q5JXX5 417 aa12.94□□□□□ -0.34
HPS4-218ENST00000519774 KCNT2Q6UVM3 1135 aa12.94□□□□□ -0.34
HPS4-218ENST00000519774 CLEC17AQ6ZS10 378 aa12.94□□□□□ -0.34
HPS4-218ENST00000519774 ZNF280BQ86YH2 543 aa12.94□□□□□ -0.34
HPS4-218ENST00000519774 NELFCDQ8IXH7 590 aa12.94□□□□□ -0.34
HPS4-218ENST00000519774 NOC3LQ8WTT2 800 aaKnown RBP12.94□□□□□ -0.34
HPS4-218ENST00000519774 POMGNT1Q8WZA1 660 aa12.94□□□□□ -0.34
HPS4-218ENST00000519774 ERCC4Q92889 916 aaPredicted RBP12.94□□□□□ -0.34
HPS4-218ENST00000519774 FAM193BQ96PV7 902 aaPredicted RBP12.94□□□□□ -0.34
HPS4-218ENST00000519774 C11orf84Q9BUA3 381 aaPredicted RBP12.94□□□□□ -0.34
HPS4-218ENST00000519774 CXCL16Q9H2A7 254 aa12.94□□□□□ -0.34
HPS4-218ENST00000519774 NRDE2Q9H7Z3 1164 aa12.94□□□□□ -0.34
HPS4-218ENST00000519774 TOPORSQ9NS56 1045 aaPredicted RBP12.94□□□□□ -0.34
HPS4-218ENST00000519774 MIOSQ9NXC5 875 aa12.94□□□□□ -0.34
HPS4-218ENST00000519774 KANSL3Q9P2N6 904 aa12.94□□□□□ -0.34
HPS4-218ENST00000519774 DNAJB4Q9UDY4 337 aa12.94□□□□□ -0.34
HPS4-218ENST00000519774 ZMYM2Q9UBW7 1377 aa12.94□□□□□ -0.34
HPS4-218ENST00000519774 PLXNA4Q9HCM2 1894 aa12.93□□□□□ -0.34
HPS4-218ENST00000519774 UBE4BO95155 1302 aa12.93□□□□□ -0.34
HPS4-218ENST00000519774 A0A0B4J269 797 aa12.93□□□□□ -0.34
HPS4-218ENST00000519774 NT5C1B-RDH14C9J2C7 533 aa12.93□□□□□ -0.34
HPS4-218ENST00000519774 C5orf67F2Z3F1 127 aa12.93□□□□□ -0.34
HPS4-218ENST00000519774 PTGESO14684 152 aa12.93□□□□□ -0.34
HPS4-218ENST00000519774 OGTO15294 1046 aa12.93□□□□□ -0.34
HPS4-218ENST00000519774 INPPL1O15357 1258 aa12.93□□□□□ -0.34
HPS4-218ENST00000519774 DDHD2O94830 711 aa12.93□□□□□ -0.34
HPS4-218ENST00000519774 RB1P06400 928 aa12.93□□□□□ -0.34
HPS4-218ENST00000519774 FOSL2P15408 326 aa12.93□□□□□ -0.34
HPS4-218ENST00000519774 TNFSF9P41273 254 aa12.93□□□□□ -0.34
HPS4-218ENST00000519774 BCAR1P56945 870 aa12.93□□□□□ -0.34
HPS4-218ENST00000519774 GRIK3Q13003 919 aa12.93□□□□□ -0.34
HPS4-218ENST00000519774 ADGRE1Q14246 886 aa12.93□□□□□ -0.34
HPS4-218ENST00000519774 ZBTB41Q5SVQ8 909 aa12.93□□□□□ -0.34
HPS4-218ENST00000519774 SLFN12LQ6IEE8 588 aa12.93□□□□□ -0.34
HPS4-218ENST00000519774 EPM2AIP1Q7L775 607 aaPredicted RBP12.93□□□□□ -0.34
HPS4-218ENST00000519774 KLHL23Q8NBE8 558 aa12.93□□□□□ -0.34
HPS4-218ENST00000519774 KIAA0895Q8NCT3 520 aa12.93□□□□□ -0.34
HPS4-218ENST00000519774 SNX27Q96L92 541 aa12.93□□□□□ -0.34
HPS4-218ENST00000519774 TIGD1Q96MW7 591 aa12.93□□□□□ -0.34
HPS4-218ENST00000519774 ACAP3Q96P50 834 aa12.93□□□□□ -0.34
HPS4-218ENST00000519774 PLVAPQ9BX97 442 aa12.93□□□□□ -0.34
HPS4-218ENST00000519774 TMEM206Q9H813 350 aa12.93□□□□□ -0.34
HPS4-218ENST00000519774 ALG13Q9NP73 1137 aaKnown RBP12.93□□□□□ -0.34
HPS4-218ENST00000519774 HOOK1Q9UJC3 728 aaKnown RBP12.93□□□□□ -0.34
HPS4-218ENST00000519774 PLAGL2Q9UPG8 496 aa12.93□□□□□ -0.34
HPS4-218ENST00000519774 H3BNC9 293 aa12.92□□□□□ -0.34
HPS4-218ENST00000519774 TULP1O00294 542 aaPredicted RBP12.92□□□□□ -0.34
HPS4-218ENST00000519774 GRM6O15303 877 aa12.92□□□□□ -0.34
HPS4-218ENST00000519774 LPXNO60711 386 aa12.92□□□□□ -0.34
HPS4-218ENST00000519774 ITGB1P05556 798 aa12.92□□□□□ -0.34
HPS4-218ENST00000519774 CLTAP09496 248 aa12.92□□□□□ -0.34
HPS4-218ENST00000519774 CXCL8P10145 99 aa12.92□□□□□ -0.34
HPS4-218ENST00000519774 HOXD13P35453 343 aa12.92□□□□□ -0.34
HPS4-218ENST00000519774 PPM1AP35813 382 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms