RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 COL4A4P53420 1690 aaPredicted RBP7.32□□□□□ -1.24
CCDC6-203ENST00000518638 MPHOSPH10O00566 681 aaKnown RBP7.31□□□□□ -1.24
CCDC6-203ENST00000518638 PGK2P07205 417 aa7.31□□□□□ -1.24
CCDC6-203ENST00000518638 STAT3P40763 770 aa7.31□□□□□ -1.24
CCDC6-203ENST00000518638 ACVR2BQ13705 512 aa7.31□□□□□ -1.24
CCDC6-203ENST00000518638 TMEM132BQ14DG7 1078 aa7.31□□□□□ -1.24
CCDC6-203ENST00000518638 SEPT2Q15019 361 aa7.31□□□□□ -1.24
CCDC6-203ENST00000518638 LEXMQ3ZCV2 418 aa7.31□□□□□ -1.24
CCDC6-203ENST00000518638 TTC39AQ5SRH9 613 aa7.31□□□□□ -1.24
CCDC6-203ENST00000518638 VHLLQ6RSH7 139 aa7.31□□□□□ -1.24
CCDC6-203ENST00000518638 NAV1Q8NEY1 1877 aa7.31□□□□□ -1.24
CCDC6-203ENST00000518638 ARNTL2Q8WYA1 636 aa7.31□□□□□ -1.24
CCDC6-203ENST00000518638 BORCS6Q96GS4 357 aa7.31□□□□□ -1.24
CCDC6-203ENST00000518638 KCNC2Q96PR1 638 aa7.31□□□□□ -1.24
CCDC6-203ENST00000518638 UPF3BQ9BZI7 483 aaKnown RBP7.31□□□□□ -1.24
CCDC6-203ENST00000518638 KLHL25Q9H0H3 589 aa7.31□□□□□ -1.24
CCDC6-203ENST00000518638 UBE2ZQ9H832 354 aaPredicted RBP7.31□□□□□ -1.24
CCDC6-203ENST00000518638 VCPKMTQ9H867 229 aa7.31□□□□□ -1.24
CCDC6-203ENST00000518638 RTEL1Q9NZ71 1219 aa7.31□□□□□ -1.24
CCDC6-203ENST00000518638 SLAMF8Q9P0V8 285 aa7.31□□□□□ -1.24
CCDC6-203ENST00000518638 SWAP70Q9UH65 585 aa7.31□□□□□ -1.24
CCDC6-203ENST00000518638 ZNF451Q9Y4E5 1061 aa7.31□□□□□ -1.24
CCDC6-203ENST00000518638 SRGAP3O43295 1099 aa7.3□□□□□ -1.24
CCDC6-203ENST00000518638 BAIAP3O94812 1187 aa7.3□□□□□ -1.24
CCDC6-203ENST00000518638 GNAI3P08754 354 aa7.3□□□□□ -1.24
CCDC6-203ENST00000518638 ITGA4P13612 1032 aa7.3□□□□□ -1.24
CCDC6-203ENST00000518638 NCLP19338 710 aaKnown RBP7.3□□□□□ -1.24
CCDC6-203ENST00000518638 SHMT1P34896 483 aa7.3□□□□□ -1.24
CCDC6-203ENST00000518638 CCL23P55773 120 aa7.3□□□□□ -1.24
CCDC6-203ENST00000518638 GRB10Q13322 594 aa7.3□□□□□ -1.24
CCDC6-203ENST00000518638 MTX1Q13505 466 aa7.3□□□□□ -1.24
CCDC6-203ENST00000518638 NCAPHQ15003 741 aa7.3□□□□□ -1.24
CCDC6-203ENST00000518638 TCEAL1Q15170 157 aa7.3□□□□□ -1.24
CCDC6-203ENST00000518638 ALDH1L2Q3SY69 923 aa7.3□□□□□ -1.24
CCDC6-203ENST00000518638 KIAA1211LQ6NV74 962 aa7.3□□□□□ -1.24
CCDC6-203ENST00000518638 RNF111Q6ZNA4 994 aa7.3□□□□□ -1.24
CCDC6-203ENST00000518638 NOP9Q86U38 636 aaKnown RBP7.3□□□□□ -1.24
CCDC6-203ENST00000518638 TEX13BQ9BXU2 312 aa7.3□□□□□ -1.24
CCDC6-203ENST00000518638 LNPKQ9C0E8 428 aa7.3□□□□□ -1.24
CCDC6-203ENST00000518638 GPR108Q9NPR9 543 aa7.3□□□□□ -1.24
CCDC6-203ENST00000518638 FBXO40Q9UH90 709 aa7.3□□□□□ -1.24
CCDC6-203ENST00000518638 ADAMTS5Q9UNA0 930 aa7.3□□□□□ -1.24
CCDC6-203ENST00000518638 TMX2Q9Y320 296 aa7.3□□□□□ -1.24
CCDC6-203ENST00000518638 FHOD1Q9Y613 1164 aa7.3□□□□□ -1.24
CCDC6-203ENST00000518638 TNKSO95271 1327 aa7.29□□□□□ -1.24
CCDC6-203ENST00000518638 MYADML2A6NDP7 307 aa7.29□□□□□ -1.24
CCDC6-203ENST00000518638 VWA5AO00534 786 aa7.29□□□□□ -1.24
CCDC6-203ENST00000518638 SNAI1O95863 264 aaPredicted RBP7.29□□□□□ -1.24
CCDC6-203ENST00000518638 MYOGP15173 224 aa7.29□□□□□ -1.24
CCDC6-203ENST00000518638 CTSKP43235 329 aa7.29□□□□□ -1.24
CCDC6-203ENST00000518638 PCBP3P57721 371 aaKnown RBP7.29□□□□□ -1.24
CCDC6-203ENST00000518638 ZNF445P59923 1031 aa7.29□□□□□ -1.24
CCDC6-203ENST00000518638 KRTAP10-2P60368 255 aa7.29□□□□□ -1.24
CCDC6-203ENST00000518638 TEKQ02763 1124 aa7.29□□□□□ -1.24
CCDC6-203ENST00000518638 TAP1Q03518 808 aa7.29□□□□□ -1.24
CCDC6-203ENST00000518638 ICA1Q05084 483 aa7.29□□□□□ -1.24
CCDC6-203ENST00000518638 GABPAQ06546 454 aa7.29□□□□□ -1.24
CCDC6-203ENST00000518638 G3BP1Q13283 466 aaKnown RBP eCLIP7.29□□□□□ -1.24
CCDC6-203ENST00000518638 ITGA7Q13683 1181 aa7.29□□□□□ -1.24
CCDC6-203ENST00000518638 CCDC144BQ3MJ40 725 aa7.29□□□□□ -1.24
CCDC6-203ENST00000518638 HEATR6Q6AI08 1181 aaKnown RBP7.29□□□□□ -1.24
CCDC6-203ENST00000518638 ANKS3Q6ZW76 656 aa7.29□□□□□ -1.24
CCDC6-203ENST00000518638 ADGRA1Q86SQ6 560 aa7.29□□□□□ -1.24
CCDC6-203ENST00000518638 HNRNPLLQ8WVV9 542 aaKnown RBP7.29□□□□□ -1.24
CCDC6-203ENST00000518638 CCDC17Q96LX7 622 aa7.29□□□□□ -1.24
CCDC6-203ENST00000518638 DSCC1Q9BVC3 393 aa7.29□□□□□ -1.24
CCDC6-203ENST00000518638 AP5M1Q9H0R1 490 aa7.29□□□□□ -1.24
CCDC6-203ENST00000518638 WHRNQ9P202 907 aa7.29□□□□□ -1.24
CCDC6-203ENST00000518638 CTNNA3Q9UI47 895 aa7.29□□□□□ -1.24
CCDC6-203ENST00000518638 TCFL5Q9UL49 500 aa7.29□□□□□ -1.24
CCDC6-203ENST00000518638 ZNF281Q9Y2X9 895 aa7.29□□□□□ -1.24
CCDC6-203ENST00000518638 CTDP1Q9Y5B0 961 aaPredicted RBP7.29□□□□□ -1.24
CCDC6-203ENST00000518638 TANC1Q9C0D5 1861 aa7.29□□□□□ -1.24
CCDC6-203ENST00000518638 XIRP2A4UGR9 3374 aa7.29□□□□□ -1.24
CCDC6-203ENST00000518638 DNAJC25-GNG10A0A024R161 153 aa7.28□□□□□ -1.24
CCDC6-203ENST00000518638 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.28□□□□□ -1.24
CCDC6-203ENST00000518638 A0A1W2PRG0 241 aa7.28□□□□□ -1.24
CCDC6-203ENST00000518638 MEIS1O00470 390 aa7.28□□□□□ -1.24
CCDC6-203ENST00000518638 ATP2A1O14983 1001 aa7.28□□□□□ -1.24
CCDC6-203ENST00000518638 KLF4O43474 513 aa7.28□□□□□ -1.24
CCDC6-203ENST00000518638 B4GALT4O60513 344 aa7.28□□□□□ -1.24
CCDC6-203ENST00000518638 IDH1O75874 414 aaKnown RBP7.28□□□□□ -1.24
CCDC6-203ENST00000518638 GSNP06396 782 aa7.28□□□□□ -1.24
CCDC6-203ENST00000518638 EPHX1P07099 455 aa7.28□□□□□ -1.24
CCDC6-203ENST00000518638 ATP2B1P20020 1258 aa7.28□□□□□ -1.24
CCDC6-203ENST00000518638 GUCY1A2P33402 732 aa7.28□□□□□ -1.24
CCDC6-203ENST00000518638 KCNJ6P48051 423 aa7.28□□□□□ -1.24
CCDC6-203ENST00000518638 ZNF143P52747 638 aaPredicted RBP7.28□□□□□ -1.24
CCDC6-203ENST00000518638 TNFAIP2Q03169 654 aa7.28□□□□□ -1.24
CCDC6-203ENST00000518638 FXNQ16595 210 aa7.28□□□□□ -1.24
CCDC6-203ENST00000518638 RALGPS1Q5JS13 557 aa7.28□□□□□ -1.24
CCDC6-203ENST00000518638 TCERG1LQ5VWI1 586 aa7.28□□□□□ -1.24
CCDC6-203ENST00000518638 LARP1BQ659C4 914 aaKnown RBP7.28□□□□□ -1.24
CCDC6-203ENST00000518638 NOL8Q76FK4 1167 aaKnown RBP7.28□□□□□ -1.24
CCDC6-203ENST00000518638 TLK2Q86UE8 772 aa7.28□□□□□ -1.24
CCDC6-203ENST00000518638 HERC6Q8IVU3 1022 aa7.28□□□□□ -1.24
CCDC6-203ENST00000518638 AMOTL1Q8IY63 956 aa7.28□□□□□ -1.24
CCDC6-203ENST00000518638 CXorf38Q8TB03 319 aa7.28□□□□□ -1.24
CCDC6-203ENST00000518638 CRNKL1Q9BZJ0 848 aaKnown RBP7.28□□□□□ -1.24
CCDC6-203ENST00000518638 FOXP3Q9BZS1 431 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms