RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 MYLK2Q9H1R3 596 aa6.76□□□□□ -1.33
CTNNA1-202ENST00000517533 TMEM60Q9H2L4 133 aa6.76□□□□□ -1.33
CTNNA1-202ENST00000517533 GREM2Q9H772 168 aa6.76□□□□□ -1.33
CTNNA1-202ENST00000517533 ZFP64Q9NPA5 681 aa6.76□□□□□ -1.33
CTNNA1-202ENST00000517533 SIRT5Q9NXA8 310 aa6.76□□□□□ -1.33
CTNNA1-202ENST00000517533 CROTQ9UKG9 612 aa6.76□□□□□ -1.33
CTNNA1-202ENST00000517533 PCDHB1Q9Y5F3 818 aa6.76□□□□□ -1.33
CTNNA1-202ENST00000517533 PCDHA13Q9Y5I0 950 aa6.76□□□□□ -1.33
CTNNA1-202ENST00000517533 LRRFIP2Q9Y608 721 aaKnown RBP6.76□□□□□ -1.33
CTNNA1-202ENST00000517533 A0A1B0GVC2 190 aa6.75□□□□□ -1.33
CTNNA1-202ENST00000517533 A0A1W2PR48 441 aa6.75□□□□□ -1.33
CTNNA1-202ENST00000517533 H3BML4 177 aa6.75□□□□□ -1.33
CTNNA1-202ENST00000517533 WNT10BO00744 389 aa6.75□□□□□ -1.33
CTNNA1-202ENST00000517533 B3GALT2O43825 422 aa6.75□□□□□ -1.33
CTNNA1-202ENST00000517533 PEX10O60683 326 aa6.75□□□□□ -1.33
CTNNA1-202ENST00000517533 UBXN7O94888 489 aa6.75□□□□□ -1.33
CTNNA1-202ENST00000517533 LY86O95711 162 aa6.75□□□□□ -1.33
CTNNA1-202ENST00000517533 SLC6A9P48067 706 aa6.75□□□□□ -1.33
CTNNA1-202ENST00000517533 STAT5BP51692 787 aa6.75□□□□□ -1.33
CTNNA1-202ENST00000517533 DGKDQ16760 1214 aa6.75□□□□□ -1.33
CTNNA1-202ENST00000517533 WDR72Q3MJ13 1102 aa6.75□□□□□ -1.33
CTNNA1-202ENST00000517533 MUM1L1Q5H9M0 696 aa6.75□□□□□ -1.33
CTNNA1-202ENST00000517533 PRR31Q5SQ13 230 aa6.75□□□□□ -1.33
CTNNA1-202ENST00000517533 FAM180BQ6P0A1 224 aa6.75□□□□□ -1.33
CTNNA1-202ENST00000517533 DARS2Q6PI48 645 aaKnown RBP6.75□□□□□ -1.33
CTNNA1-202ENST00000517533 MPZL3Q6UWV2 235 aa6.75□□□□□ -1.33
CTNNA1-202ENST00000517533 LMBR1LQ6UX01 489 aa6.75□□□□□ -1.33
CTNNA1-202ENST00000517533 Q6ZVL8 140 aa6.75□□□□□ -1.33
CTNNA1-202ENST00000517533 DENND1CQ8IV53 801 aa6.75□□□□□ -1.33
CTNNA1-202ENST00000517533 TMEFF1Q8IYR6 380 aa6.75□□□□□ -1.33
CTNNA1-202ENST00000517533 KIAA0319LQ8IZA0 1049 aa6.75□□□□□ -1.33
CTNNA1-202ENST00000517533 CAMKK1Q8N5S9 505 aa6.75□□□□□ -1.33
CTNNA1-202ENST00000517533 HIST1H2AHQ96KK5 128 aa6.75□□□□□ -1.33
CTNNA1-202ENST00000517533 SERINC2Q96SA4 455 aa6.75□□□□□ -1.33
CTNNA1-202ENST00000517533 DMRTA2Q96SC8 542 aa6.75□□□□□ -1.33
CTNNA1-202ENST00000517533 HIST1H2AJQ99878 128 aa6.75□□□□□ -1.33
CTNNA1-202ENST00000517533 B3GNT5Q9BYG0 378 aa6.75□□□□□ -1.33
CTNNA1-202ENST00000517533 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.75□□□□□ -1.333e-7■□□□□ 10.9
CTNNA1-202ENST00000517533 OSBPL5Q9H0X9 879 aaPredicted RBP6.75□□□□□ -1.33
CTNNA1-202ENST00000517533 AGO4Q9HCK5 861 aaKnown RBP6.75□□□□□ -1.33
CTNNA1-202ENST00000517533 ARFGAP3Q9NP61 516 aa6.75□□□□□ -1.33
CTNNA1-202ENST00000517533 SIK3Q9Y2K2 1263 aa6.75□□□□□ -1.33
CTNNA1-202ENST00000517533 TEX51A0A1B0GUA7 166 aa6.74□□□□□ -1.33
CTNNA1-202ENST00000517533 LRRC14BA6NHZ5 514 aa6.74□□□□□ -1.33
CTNNA1-202ENST00000517533 FAM227AF5H4B4 570 aa6.74□□□□□ -1.33
CTNNA1-202ENST00000517533 NCK2O43639 380 aa6.74□□□□□ -1.33
CTNNA1-202ENST00000517533 CTSSP25774 331 aa6.74□□□□□ -1.33
CTNNA1-202ENST00000517533 PEX2P28328 305 aa6.74□□□□□ -1.33
CTNNA1-202ENST00000517533 SLC16A1P53985 500 aa6.74□□□□□ -1.33
CTNNA1-202ENST00000517533 TNFAIP2Q03169 654 aa6.74□□□□□ -1.33
CTNNA1-202ENST00000517533 BTKQ06187 659 aa6.74□□□□□ -1.33
CTNNA1-202ENST00000517533 DLX2Q07687 328 aaPredicted RBP6.74□□□□□ -1.33
CTNNA1-202ENST00000517533 G3BP1Q13283 466 aaKnown RBP eCLIP6.74□□□□□ -1.338e-8■■■□□ 18.1
CTNNA1-202ENST00000517533 TARBP2Q15633 366 aaKnown RBP6.74□□□□□ -1.33
CTNNA1-202ENST00000517533 ALDH1L2Q3SY69 923 aa6.74□□□□□ -1.33
CTNNA1-202ENST00000517533 RNF220Q5VTB9 566 aa6.74□□□□□ -1.33
CTNNA1-202ENST00000517533 ARMC3Q5W041 872 aa6.74□□□□□ -1.33
CTNNA1-202ENST00000517533 OLFML2BQ68BL8 750 aa6.74□□□□□ -1.33
CTNNA1-202ENST00000517533 CXXC5Q7LFL8 322 aaKnown RBP6.74□□□□□ -1.33
CTNNA1-202ENST00000517533 MSL3Q8N5Y2 521 aaKnown RBP6.74□□□□□ -1.33
CTNNA1-202ENST00000517533 KYQ8NBH2 561 aa6.74□□□□□ -1.33
CTNNA1-202ENST00000517533 NAXEQ8NCW5 288 aa6.74□□□□□ -1.33
CTNNA1-202ENST00000517533 PLBD2Q8NHP8 589 aa6.74□□□□□ -1.33
CTNNA1-202ENST00000517533 ZSCAN18Q8TBC5 510 aaPredicted RBP6.74□□□□□ -1.33
CTNNA1-202ENST00000517533 TBC1D20Q96BZ9 403 aa6.74□□□□□ -1.33
CTNNA1-202ENST00000517533 C1GALT1C1Q96EU7 318 aa6.74□□□□□ -1.33
CTNNA1-202ENST00000517533 CGRRF1Q99675 332 aa6.74□□□□□ -1.33
CTNNA1-202ENST00000517533 EPB41L4AQ9HCS5 686 aaPredicted RBP6.74□□□□□ -1.33
CTNNA1-202ENST00000517533 POLR3BQ9NW08 1133 aaPredicted RBP6.74□□□□□ -1.33
CTNNA1-202ENST00000517533 SPATA6Q9NWH7 488 aaPredicted RBP6.74□□□□□ -1.33
CTNNA1-202ENST00000517533 L1RE1Q9UN81 338 aa6.74□□□□□ -1.33
CTNNA1-202ENST00000517533 EYA2O00167 538 aa6.73□□□□□ -1.33
CTNNA1-202ENST00000517533 KLHL18O94889 574 aa6.73□□□□□ -1.33
CTNNA1-202ENST00000517533 GAAP10253 952 aa6.73□□□□□ -1.33
CTNNA1-202ENST00000517533 TNFSF4P23510 183 aa6.73□□□□□ -1.33
CTNNA1-202ENST00000517533 MAP2K6P52564 334 aa6.73□□□□□ -1.33
CTNNA1-202ENST00000517533 MGAT2Q10469 447 aa6.73□□□□□ -1.33
CTNNA1-202ENST00000517533 PPFIA1Q13136 1202 aa6.73□□□□□ -1.33
CTNNA1-202ENST00000517533 NOMO1Q15155 1222 aa6.73□□□□□ -1.33
CTNNA1-202ENST00000517533 CCDC178Q5BJE1 867 aa6.73□□□□□ -1.33
CTNNA1-202ENST00000517533 MZT2BQ6NZ67 158 aa6.73□□□□□ -1.33
CTNNA1-202ENST00000517533 NPNTQ6UXI9 565 aa6.73□□□□□ -1.33
CTNNA1-202ENST00000517533 LARP4Q71RC2 724 aaKnown RBP eCLIP6.73□□□□□ -1.33
CTNNA1-202ENST00000517533 FAM129CQ86XR2 697 aa6.73□□□□□ -1.33
CTNNA1-202ENST00000517533 TTC30BQ8N4P2 665 aa6.73□□□□□ -1.33
CTNNA1-202ENST00000517533 NUDT10Q8NFP7 164 aa6.73□□□□□ -1.33
CTNNA1-202ENST00000517533 ZBTB8AQ96BR9 441 aa6.73□□□□□ -1.33
CTNNA1-202ENST00000517533 NUDT11Q96G61 164 aa6.73□□□□□ -1.33
CTNNA1-202ENST00000517533 CLIC6Q96NY7 704 aa6.73□□□□□ -1.33
CTNNA1-202ENST00000517533 NT5C1BQ96P26 610 aa6.73□□□□□ -1.33
CTNNA1-202ENST00000517533 LRRC27Q9C0I9 530 aa6.73□□□□□ -1.33
CTNNA1-202ENST00000517533 RSPH9Q9H1X1 276 aaPredicted RBP6.73□□□□□ -1.33
CTNNA1-202ENST00000517533 EPB41L4BQ9H329 900 aa6.73□□□□□ -1.33
CTNNA1-202ENST00000517533 DCP1AQ9NPI6 582 aaPredicted RBP6.73□□□□□ -1.33
CTNNA1-202ENST00000517533 SMC4Q9NTJ3 1288 aa6.73□□□□□ -1.33
CTNNA1-202ENST00000517533 TPCN1Q9ULQ1 816 aa6.73□□□□□ -1.33
CTNNA1-202ENST00000517533 NOL7Q9UMY1 257 aaKnown RBP6.73□□□□□ -1.33
CTNNA1-202ENST00000517533 RPGRIP1LQ68CZ1 1315 aa6.73□□□□□ -1.33
CTNNA1-202ENST00000517533 A0A087WV62 115 aa6.72□□□□□ -1.33
CTNNA1-202ENST00000517533 A0A0G2JNJ9 132 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms