RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 KNOP1Q1ED39 458 aaKnown RBP11.65□□□□□ -0.54
TRIM41-209ENST00000515834 ARL6IP4Q66PJ3 421 aaKnown RBP11.65□□□□□ -0.54
TRIM41-209ENST00000515834 CDKL3Q8IVW4 592 aaPredicted RBP11.65□□□□□ -0.54
TRIM41-209ENST00000515834 TRIML2Q8N7C3 387 aa11.65□□□□□ -0.54
TRIM41-209ENST00000515834 ATP11CQ8NB49 1132 aa11.65□□□□□ -0.54
TRIM41-209ENST00000515834 TUBB6Q9BUF5 446 aa11.65□□□□□ -0.54
TRIM41-209ENST00000515834 MAD2L2Q9UI95 211 aa11.65□□□□□ -0.54
TRIM41-209ENST00000515834 NFU1Q9UMS0 254 aa11.65□□□□□ -0.54
TRIM41-209ENST00000515834 KIF21AQ7Z4S6 1674 aa11.65□□□□□ -0.54
TRIM41-209ENST00000515834 NPHP3-ACAD11A0A0J9YXS1 232 aa11.65□□□□□ -0.54
TRIM41-209ENST00000515834 LUC7L3O95232 432 aaKnown RBP11.65□□□□□ -0.54
TRIM41-209ENST00000515834 DDX5P17844 614 aaKnown RBP11.65□□□□□ -0.54
TRIM41-209ENST00000515834 CSE1LP55060 971 aaKnown RBP11.65□□□□□ -0.54
TRIM41-209ENST00000515834 WDR72Q3MJ13 1102 aa11.65□□□□□ -0.54
TRIM41-209ENST00000515834 ABTB1Q969K4 478 aaPredicted RBP11.65□□□□□ -0.54
TRIM41-209ENST00000515834 L3MBTL3Q96JM7 780 aaPredicted RBP11.65□□□□□ -0.54
TRIM41-209ENST00000515834 AKR1B1P15121 316 aa11.65□□□□□ -0.54
TRIM41-209ENST00000515834 NUMBP49757 651 aa11.65□□□□□ -0.54
TRIM41-209ENST00000515834 TMEM132DQ14C87 1099 aa11.65□□□□□ -0.54
TRIM41-209ENST00000515834 NUGGCQ68CJ6 796 aa11.65□□□□□ -0.54
TRIM41-209ENST00000515834 BFARQ9NZS9 450 aa11.65□□□□□ -0.54
TRIM41-209ENST00000515834 ALDH1A2O94788 518 aa11.65□□□□□ -0.55
TRIM41-209ENST00000515834 ACOT2P49753 483 aa11.65□□□□□ -0.55
TRIM41-209ENST00000515834 C6orf118Q5T5N4 469 aa11.65□□□□□ -0.55
TRIM41-209ENST00000515834 SMARCAD1Q9H4L7 1026 aa11.65□□□□□ -0.55
TRIM41-209ENST00000515834 MLXIPLQ9NP71 852 aa11.65□□□□□ -0.55
TRIM41-209ENST00000515834 DCP1AQ9NPI6 582 aaPredicted RBP11.65□□□□□ -0.55
TRIM41-209ENST00000515834 LATS2Q9NRM7 1088 aa11.65□□□□□ -0.55
TRIM41-209ENST00000515834 TRIM33Q9UPN9 1127 aa11.65□□□□□ -0.55
TRIM41-209ENST00000515834 ARHGEF12Q9NZN5 1544 aa11.65□□□□□ -0.55
TRIM41-209ENST00000515834 KRT7P08729 469 aa11.64□□□□□ -0.55
TRIM41-209ENST00000515834 SPARCL1Q14515 664 aa11.64□□□□□ -0.55
TRIM41-209ENST00000515834 SLC25A41Q8N5S1 370 aa11.64□□□□□ -0.55
TRIM41-209ENST00000515834 AAASQ9NRG9 546 aa11.64□□□□□ -0.55
TRIM41-209ENST00000515834 PKP3Q9Y446 797 aa11.64□□□□□ -0.55
TRIM41-209ENST00000515834 ADGRL3Q9HAR2 1447 aa11.64□□□□□ -0.55
TRIM41-209ENST00000515834 TTLL13PA6NNM8 815 aa11.64□□□□□ -0.55
TRIM41-209ENST00000515834 FTLP02792 175 aaPredicted RBP11.64□□□□□ -0.55
TRIM41-209ENST00000515834 DRAP1Q14919 205 aaPredicted RBP11.64□□□□□ -0.55
TRIM41-209ENST00000515834 ATPAF2Q8N5M1 289 aa11.64□□□□□ -0.55
TRIM41-209ENST00000515834 TDRD7Q8NHU6 1098 aaKnown RBP11.64□□□□□ -0.55
TRIM41-209ENST00000515834 KIFC3Q9BVG8 833 aa11.64□□□□□ -0.55
TRIM41-209ENST00000515834 HERC5Q9UII4 1024 aaKnown RBP11.64□□□□□ -0.55
TRIM41-209ENST00000515834 BICRAQ9NZM4 1560 aa11.64□□□□□ -0.55
TRIM41-209ENST00000515834 TRIM49P0CI25 452 aa11.64□□□□□ -0.55
TRIM41-209ENST00000515834 TRIM49CP0CI26 452 aa11.64□□□□□ -0.55
TRIM41-209ENST00000515834 MCF2P10911 925 aa11.64□□□□□ -0.55
TRIM41-209ENST00000515834 CETPP11597 493 aa11.64□□□□□ -0.55
TRIM41-209ENST00000515834 THPOP40225 353 aa11.64□□□□□ -0.55
TRIM41-209ENST00000515834 MDM2Q00987 491 aaPredicted RBP11.64□□□□□ -0.55
TRIM41-209ENST00000515834 HIF1AQ16665 826 aa11.64□□□□□ -0.55
TRIM41-209ENST00000515834 EPM2AIP1Q7L775 607 aaPredicted RBP11.64□□□□□ -0.55
TRIM41-209ENST00000515834 PRG3Q9Y2Y8 225 aaPredicted RBP11.64□□□□□ -0.55
TRIM41-209ENST00000515834 ROBO2Q9HCK4 1378 aa11.64□□□□□ -0.55
TRIM41-209ENST00000515834 EMSYQ7Z589 1322 aa11.64□□□□□ -0.55
TRIM41-209ENST00000515834 PFDN1O60925 122 aa11.64□□□□□ -0.55
TRIM41-209ENST00000515834 LIFRP42702 1097 aa11.64□□□□□ -0.55
TRIM41-209ENST00000515834 FAM47EQ6ZV65 393 aa11.64□□□□□ -0.55
TRIM41-209ENST00000515834 GPRC5AQ8NFJ5 357 aa11.64□□□□□ -0.55
TRIM41-209ENST00000515834 MAPKBP1O60336 1514 aa11.64□□□□□ -0.55
TRIM41-209ENST00000515834 TDP2O95551 362 aa11.64□□□□□ -0.55
TRIM41-209ENST00000515834 PDIA2Q13087 525 aaKnown RBP11.64□□□□□ -0.55
TRIM41-209ENST00000515834 C10orf120Q5SQS8 335 aa11.64□□□□□ -0.55
TRIM41-209ENST00000515834 RGS9BPQ6ZS82 235 aa11.64□□□□□ -0.55
TRIM41-209ENST00000515834 PITPNM3Q9BZ71 974 aa11.64□□□□□ -0.55
TRIM41-209ENST00000515834 STAP2Q9UGK3 403 aa11.64□□□□□ -0.55
TRIM41-209ENST00000515834 SPATA31A3Q5VYP0 1347 aa11.64□□□□□ -0.55
TRIM41-209ENST00000515834 KCNN4O15554 427 aa11.64□□□□□ -0.55
TRIM41-209ENST00000515834 RFX3P48380 749 aa11.64□□□□□ -0.55
TRIM41-209ENST00000515834 GMPSP49915 693 aaPredicted RBP11.64□□□□□ -0.55
TRIM41-209ENST00000515834 SESN2P58004 480 aaPredicted RBP11.64□□□□□ -0.55
TRIM41-209ENST00000515834 ADCY2Q08462 1091 aa11.64□□□□□ -0.55
TRIM41-209ENST00000515834 ZC3H15Q8WU90 426 aaKnown RBP11.64□□□□□ -0.55
TRIM41-209ENST00000515834 YME1L1Q96TA2 773 aa11.64□□□□□ -0.55
TRIM41-209ENST00000515834 PYCARDQ9ULZ3 195 aa11.64□□□□□ -0.55
TRIM41-209ENST00000515834 SLC30A1Q9Y6M5 507 aa11.64□□□□□ -0.55
TRIM41-209ENST00000515834 NDUFS3O75489 264 aa11.63□□□□□ -0.55
TRIM41-209ENST00000515834 LMNAP02545 664 aaKnown RBP11.63□□□□□ -0.55
TRIM41-209ENST00000515834 HSPA1AP0DMV8 641 aaKnown RBP11.63□□□□□ -0.55
TRIM41-209ENST00000515834 HSPA1BP0DMV9 641 aaKnown RBP11.63□□□□□ -0.55
TRIM41-209ENST00000515834 ENAHQ8N8S7 591 aaPredicted RBP11.63□□□□□ -0.55
TRIM41-209ENST00000515834 OXER1Q8TDS5 423 aa11.63□□□□□ -0.55
TRIM41-209ENST00000515834 SPATA16Q9BXB7 569 aa11.63□□□□□ -0.55
TRIM41-209ENST00000515834 CEP72Q9P209 647 aa11.63□□□□□ -0.55
TRIM41-209ENST00000515834 ATP11BQ9Y2G3 1177 aa11.63□□□□□ -0.55
TRIM41-209ENST00000515834 USP6P35125 1406 aa11.63□□□□□ -0.55
TRIM41-209ENST00000515834 SYNGAP1Q96PV0 1343 aa11.63□□□□□ -0.55
TRIM41-209ENST00000515834 ABCA5Q8WWZ7 1642 aa11.63□□□□□ -0.55
TRIM41-209ENST00000515834 PSMD14O00487 310 aa11.63□□□□□ -0.55
TRIM41-209ENST00000515834 CTIFO43310 598 aaKnown RBP11.63□□□□□ -0.55
TRIM41-209ENST00000515834 MAP2K2P36507 400 aa11.63□□□□□ -0.55
TRIM41-209ENST00000515834 HARS2P49590 506 aaKnown RBP11.63□□□□□ -0.55
TRIM41-209ENST00000515834 NLRP11P59045 1033 aaKnown RBP11.63□□□□□ -0.55
TRIM41-209ENST00000515834 PHKG1Q16816 387 aa11.63□□□□□ -0.55
TRIM41-209ENST00000515834 CLMNQ96JQ2 1002 aa11.63□□□□□ -0.55
TRIM41-209ENST00000515834 ABI2Q9NYB9 513 aaPredicted RBP11.63□□□□□ -0.55
TRIM41-209ENST00000515834 SOAT1P35610 550 aa11.63□□□□□ -0.55
TRIM41-209ENST00000515834 EFNA5P52803 228 aa11.63□□□□□ -0.55
TRIM41-209ENST00000515834 UBE3AQ05086 875 aa11.63□□□□□ -0.55
TRIM41-209ENST00000515834 KHDRBS2Q5VWX1 349 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms