RNA–Protein interactions for RNA: ENST00000515391.5

CDK7-213, Transcript of cyclin dependent kinase 7, humanhuman

TSL 2

Gene CDK7, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-213ENST00000515391 HSCBQ8IWL3 235 aa14.36□□□□□ -0.11
CDK7-213ENST00000515391 C12orf76Q8N812 135 aaPredicted RBP14.36□□□□□ -0.11
CDK7-213ENST00000515391 TMEM87AQ8NBN3 555 aa14.36□□□□□ -0.11
CDK7-213ENST00000515391 FEZF2Q8TBJ5 459 aa14.36□□□□□ -0.11
CDK7-213ENST00000515391 RAD54LQ92698 747 aa14.36□□□□□ -0.11
CDK7-213ENST00000515391 REEP2Q9BRK0 252 aa14.36□□□□□ -0.11
CDK7-213ENST00000515391 CDT1Q9H211 546 aa14.36□□□□□ -0.11
CDK7-213ENST00000515391 S1PR5Q9H228 398 aa14.36□□□□□ -0.11
CDK7-213ENST00000515391 TNFSF13BQ9Y275 285 aa14.36□□□□□ -0.11
CDK7-213ENST00000515391 CARNS1A5YM72 827 aa14.35□□□□□ -0.11
CDK7-213ENST00000515391 C19orf67A6NJJ6 358 aa14.35□□□□□ -0.11
CDK7-213ENST00000515391 SLC26A4O43511 780 aa14.35□□□□□ -0.11
CDK7-213ENST00000515391 LILRB3O75022 631 aa14.35□□□□□ -0.11
CDK7-213ENST00000515391 CNPP09543 421 aaKnown RBP14.35□□□□□ -0.11
CDK7-213ENST00000515391 MYBP10242 640 aa14.35□□□□□ -0.11
CDK7-213ENST00000515391 HARSP12081 509 aaKnown RBP14.35□□□□□ -0.11
CDK7-213ENST00000515391 DCAF4L1Q3SXM0 396 aa14.35□□□□□ -0.11
CDK7-213ENST00000515391 ZNF568Q3ZCX4 644 aa14.35□□□□□ -0.11
CDK7-213ENST00000515391 ADHFE1Q8IWW8 467 aa14.35□□□□□ -0.11
CDK7-213ENST00000515391 KCTD17Q8N5Z5 321 aa14.35□□□□□ -0.11
CDK7-213ENST00000515391 TMEM161BQ8NDZ6 487 aa14.35□□□□□ -0.11
CDK7-213ENST00000515391 HASPINQ8TF76 798 aa14.35□□□□□ -0.11
CDK7-213ENST00000515391 SLC22A17Q8WUG5 538 aa14.35□□□□□ -0.11
CDK7-213ENST00000515391 CASP10Q92851 521 aa14.35□□□□□ -0.11
CDK7-213ENST00000515391 KLHL5Q96PQ7 755 aa14.35□□□□□ -0.11
CDK7-213ENST00000515391 NTPCRQ9BSD7 190 aaKnown RBP14.35□□□□□ -0.11
CDK7-213ENST00000515391 TCHPQ9BT92 498 aa14.35□□□□□ -0.11
CDK7-213ENST00000515391 HERC2P3Q9BVR0 1158 aa14.35□□□□□ -0.11
CDK7-213ENST00000515391 TIPINQ9BVW5 301 aa14.35□□□□□ -0.11
CDK7-213ENST00000515391 COLEC11Q9BWP8 271 aa14.35□□□□□ -0.11
CDK7-213ENST00000515391 MRPL4Q9BYD3 311 aaKnown RBP14.35□□□□□ -0.11
CDK7-213ENST00000515391 GPR62Q9BZJ7 368 aa14.35□□□□□ -0.11
CDK7-213ENST00000515391 CCSER1Q9C0I3 900 aa14.35□□□□□ -0.11
CDK7-213ENST00000515391 C17orf75Q9HAS0 396 aa14.35□□□□□ -0.11
CDK7-213ENST00000515391 PTPRHQ9HD43 1115 aa14.35□□□□□ -0.11
CDK7-213ENST00000515391 TFIP11Q9UBB9 837 aaKnown RBP14.35□□□□□ -0.11
CDK7-213ENST00000515391 RBM19Q9Y4C8 960 aaKnown RBP14.35□□□□□ -0.11
CDK7-213ENST00000515391 SRPRBQ9Y5M8 271 aaKnown RBP14.35□□□□□ -0.11
CDK7-213ENST00000515391 IRAK3Q9Y616 596 aa14.35□□□□□ -0.11
CDK7-213ENST00000515391 VCANP13611 3396 aa14.35□□□□□ -0.11
CDK7-213ENST00000515391 SPTBN5Q9NRC6 3674 aaKnown RBP14.35□□□□□ -0.11
CDK7-213ENST00000515391 TRIP11Q15643 1979 aa14.34□□□□□ -0.11
CDK7-213ENST00000515391 ABLIM1O14639 778 aa14.34□□□□□ -0.11
CDK7-213ENST00000515391 NR1I2O75469 434 aa14.34□□□□□ -0.11
CDK7-213ENST00000515391 EFEMP2O95967 443 aa14.34□□□□□ -0.11
CDK7-213ENST00000515391 SOD2P04179 222 aa14.34□□□□□ -0.11
CDK7-213ENST00000515391 THP07101 528 aa14.34□□□□□ -0.11
CDK7-213ENST00000515391 WEE2P0C1S8 567 aa14.34□□□□□ -0.11
CDK7-213ENST00000515391 MAPTP10636 758 aaKnown RBP14.34□□□□□ -0.11
CDK7-213ENST00000515391 TUSC3Q13454 348 aa14.34□□□□□ -0.11
CDK7-213ENST00000515391 GIT2Q14161 759 aa14.34□□□□□ -0.11
CDK7-213ENST00000515391 NAB2Q15742 525 aa14.34□□□□□ -0.11
CDK7-213ENST00000515391 FOXD4L6Q3SYB3 417 aaPredicted RBP14.34□□□□□ -0.11
CDK7-213ENST00000515391 SEZ6Q53EL9 994 aa14.34□□□□□ -0.11
CDK7-213ENST00000515391 FUT10Q6P4F1 479 aa14.34□□□□□ -0.11
CDK7-213ENST00000515391 FOXD4L3Q6VB84 417 aaPredicted RBP14.34□□□□□ -0.11
CDK7-213ENST00000515391 RNF168Q8IYW5 571 aaPredicted RBP14.34□□□□□ -0.11
CDK7-213ENST00000515391 SPIRE2Q8WWL2 714 aa14.34□□□□□ -0.11
CDK7-213ENST00000515391 PANK2Q9BZ23 570 aa14.34□□□□□ -0.11
CDK7-213ENST00000515391 ZHX3Q9H4I2 956 aa14.34□□□□□ -0.11
CDK7-213ENST00000515391 ZSCAN16Q9H4T2 348 aaPredicted RBP14.34□□□□□ -0.11
CDK7-213ENST00000515391 PRKAG3Q9UGI9 489 aa14.34□□□□□ -0.11
CDK7-213ENST00000515391 XIRP2A4UGR9 3374 aa14.34□□□□□ -0.11
CDK7-213ENST00000515391 NCOR1O75376 2440 aa14.33□□□□□ -0.12
CDK7-213ENST00000515391 FSD2A1L4K1 749 aa14.33□□□□□ -0.12
CDK7-213ENST00000515391 TADA2AO75478 443 aa14.33□□□□□ -0.12
CDK7-213ENST00000515391 FAM13AO94988 1023 aa14.33□□□□□ -0.12
CDK7-213ENST00000515391 KRT18P05783 430 aaKnown RBP14.33□□□□□ -0.12
CDK7-213ENST00000515391 URODP06132 367 aa14.33□□□□□ -0.12
CDK7-213ENST00000515391 HSP90AA1P07900 732 aaKnown RBP14.33□□□□□ -0.12
CDK7-213ENST00000515391 SRGAP2BP0DMP2 458 aa14.33□□□□□ -0.12
CDK7-213ENST00000515391 KLRC2P26717 231 aa14.33□□□□□ -0.12
CDK7-213ENST00000515391 GRM5P41594 1212 aa14.33□□□□□ -0.12
CDK7-213ENST00000515391 SMTNP53814 917 aa14.33□□□□□ -0.12
CDK7-213ENST00000515391 NCKAP1LP55160 1127 aa14.33□□□□□ -0.12
CDK7-213ENST00000515391 STRN3Q13033 797 aa14.33□□□□□ -0.12
CDK7-213ENST00000515391 HSP90AA2PQ14568 343 aaPredicted RBP14.33□□□□□ -0.12
CDK7-213ENST00000515391 SLC39A14Q15043 492 aa14.33□□□□□ -0.12
CDK7-213ENST00000515391 RARS2Q5T160 578 aaKnown RBP14.33□□□□□ -0.12
CDK7-213ENST00000515391 KIAA0319Q5VV43 1072 aa14.33□□□□□ -0.12
CDK7-213ENST00000515391 HAUS6Q7Z4H7 955 aa14.33□□□□□ -0.12
CDK7-213ENST00000515391 MYCT1Q8N699 235 aa14.33□□□□□ -0.12
CDK7-213ENST00000515391 SUSD6Q92537 303 aa14.33□□□□□ -0.12
CDK7-213ENST00000515391 LARP4BQ92615 738 aaKnown RBP14.33□□□□□ -0.12
CDK7-213ENST00000515391 GOLGA2P5Q9HBQ8 144 aa14.33□□□□□ -0.12
CDK7-213ENST00000515391 MRPL17Q9NRX2 175 aaKnown RBP14.33□□□□□ -0.12
CDK7-213ENST00000515391 KCND2Q9NZV8 630 aa14.33□□□□□ -0.12
CDK7-213ENST00000515391 ANKFY1Q9P2R3 1169 aa14.33□□□□□ -0.12
CDK7-213ENST00000515391 ADAM28Q9UKQ2 775 aa14.33□□□□□ -0.12
CDK7-213ENST00000515391 ZMYM2Q9UBW7 1377 aa14.33□□□□□ -0.12
CDK7-213ENST00000515391 MEFVO15553 781 aaPredicted RBP14.32□□□□□ -0.12
CDK7-213ENST00000515391 KIF4AO95239 1232 aa14.32□□□□□ -0.12
CDK7-213ENST00000515391 PROZP22891 400 aa14.32□□□□□ -0.12
CDK7-213ENST00000515391 SP100P23497 879 aaPredicted RBP14.32□□□□□ -0.12
CDK7-213ENST00000515391 DDIT3P35638 169 aa14.32□□□□□ -0.12
CDK7-213ENST00000515391 GLUD2P49448 558 aa14.32□□□□□ -0.12
CDK7-213ENST00000515391 KIAA1841Q6NSI8 718 aa14.32□□□□□ -0.12
CDK7-213ENST00000515391 PRSS55Q6UWB4 352 aaPredicted RBP14.32□□□□□ -0.12
CDK7-213ENST00000515391 MPZL3Q6UWV2 235 aa14.32□□□□□ -0.12
CDK7-213ENST00000515391 DYMQ7RTS9 669 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms