RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 CLTCQ00610 1675 aaKnown RBP4.73□□□□□ -1.65
CAST-242ENST00000515063 SIGLEC1Q9BZZ2 1709 aa4.72□□□□□ -1.65
CAST-242ENST00000515063 ANKRD26Q9UPS8 1709 aa4.72□□□□□ -1.65
CAST-242ENST00000515063 UBE2QL1A1L167 161 aa4.72□□□□□ -1.65
CAST-242ENST00000515063 TGM5O43548 720 aa4.72□□□□□ -1.65
CAST-242ENST00000515063 PCDH8O95206 1070 aa4.72□□□□□ -1.65
CAST-242ENST00000515063 NCLP19338 710 aaKnown RBP4.72□□□□□ -1.65
CAST-242ENST00000515063 ANP32AP39687 249 aaKnown RBP4.72□□□□□ -1.65
CAST-242ENST00000515063 STAT3P40763 770 aa4.72□□□□□ -1.65
CAST-242ENST00000515063 ADCYAP1R1P41586 468 aa4.72□□□□□ -1.65
CAST-242ENST00000515063 PTH1RQ03431 593 aa4.72□□□□□ -1.65
CAST-242ENST00000515063 FKBP15Q5T1M5 1219 aa4.72□□□□□ -1.65
CAST-242ENST00000515063 LMBR1LQ6UX01 489 aa4.72□□□□□ -1.65
CAST-242ENST00000515063 GLB1L2Q8IW92 636 aa4.72□□□□□ -1.65
CAST-242ENST00000515063 GSPT2Q8IYD1 628 aaKnown RBP4.72□□□□□ -1.65
CAST-242ENST00000515063 CMTM4Q8IZR5 234 aa4.72□□□□□ -1.65
CAST-242ENST00000515063 EXOC6Q8TAG9 804 aa4.72□□□□□ -1.65
CAST-242ENST00000515063 PAWRQ96IZ0 340 aaKnown RBP4.72□□□□□ -1.65
CAST-242ENST00000515063 GPHA2Q96T91 129 aa4.72□□□□□ -1.65
CAST-242ENST00000515063 TTC1Q99614 292 aa4.72□□□□□ -1.65
CAST-242ENST00000515063 EMC7Q9NPA0 242 aa4.72□□□□□ -1.65
CAST-242ENST00000515063 SPTLC3Q9NUV7 552 aa4.72□□□□□ -1.65
CAST-242ENST00000515063 PARPBPQ9NWS1 579 aa4.72□□□□□ -1.65
CAST-242ENST00000515063 NCDNQ9UBB6 729 aa4.72□□□□□ -1.65
CAST-242ENST00000515063 NOC2LQ9Y3T9 749 aaKnown RBP4.72□□□□□ -1.65
CAST-242ENST00000515063 NUMBLQ9Y6R0 609 aa4.72□□□□□ -1.65
CAST-242ENST00000515063 NKTRP30414 1462 aaKnown RBP4.72□□□□□ -1.65
CAST-242ENST00000515063 SHPRHQ149N8 1683 aa4.72□□□□□ -1.65
CAST-242ENST00000515063 PREX1Q8TCU6 1659 aa4.72□□□□□ -1.65
CAST-242ENST00000515063 CFAP65Q6ZU64 1925 aaKnown RBP4.72□□□□□ -1.65
CAST-242ENST00000515063 AGLP35573 1532 aa4.72□□□□□ -1.65
CAST-242ENST00000515063 MED14O60244 1454 aa4.71□□□□□ -1.66
CAST-242ENST00000515063 ANKRD36BQ8N2N9 1353 aa4.71□□□□□ -1.66
CAST-242ENST00000515063 PLEKHH1Q9ULM0 1364 aa4.71□□□□□ -1.66
CAST-242ENST00000515063 A0A087X0B3 334 aa4.71□□□□□ -1.66
CAST-242ENST00000515063 KRTAP23-1A1A580 65 aa4.71□□□□□ -1.66
CAST-242ENST00000515063 ZEB2O60315 1214 aa4.71□□□□□ -1.66
CAST-242ENST00000515063 KDM1AO60341 852 aa4.71□□□□□ -1.66
CAST-242ENST00000515063 MFAP3LO75121 409 aa4.71□□□□□ -1.66
CAST-242ENST00000515063 ULK1O75385 1050 aa4.71□□□□□ -1.66
CAST-242ENST00000515063 PFKMP08237 780 aa4.71□□□□□ -1.66
CAST-242ENST00000515063 HNRNPLP14866 589 aaKnown RBP eCLIP4.71□□□□□ -1.66
CAST-242ENST00000515063 SOX5P35711 763 aa4.71□□□□□ -1.66
CAST-242ENST00000515063 GYS2P54840 703 aa4.71□□□□□ -1.66
CAST-242ENST00000515063 CNGB1Q14028 1251 aaPredicted RBP4.71□□□□□ -1.66
CAST-242ENST00000515063 SPIDRQ14159 915 aa4.71□□□□□ -1.66
CAST-242ENST00000515063 ELAVL1Q15717 326 aaKnown RBP4.71□□□□□ -1.66
CAST-242ENST00000515063 ATP13A4Q4VNC1 1196 aa4.71□□□□□ -1.66
CAST-242ENST00000515063 UNQ6494/PRO21346Q6UXR6 183 aa4.71□□□□□ -1.66
CAST-242ENST00000515063 DDX46Q7L014 1031 aaKnown RBP4.71□□□□□ -1.66
CAST-242ENST00000515063 RASSF3Q86WH2 238 aa4.71□□□□□ -1.66
CAST-242ENST00000515063 CXorf67Q86X51 503 aaPredicted RBP4.71□□□□□ -1.66
CAST-242ENST00000515063 SLC16A11Q8NCK7 471 aa4.71□□□□□ -1.66
CAST-242ENST00000515063 PPP1R14CQ8TAE6 165 aa4.71□□□□□ -1.66
CAST-242ENST00000515063 GAB3Q8WWW8 586 aa4.71□□□□□ -1.66
CAST-242ENST00000515063 SLC5A5Q92911 643 aa4.71□□□□□ -1.66
CAST-242ENST00000515063 EXTL1Q92935 676 aa4.71□□□□□ -1.66
CAST-242ENST00000515063 ZNF503Q96F45 646 aa4.71□□□□□ -1.66
CAST-242ENST00000515063 ZNF496Q96IT1 587 aaPredicted RBP4.71□□□□□ -1.66
CAST-242ENST00000515063 PLEKHG4BQ96PX9 1271 aa4.71□□□□□ -1.66
CAST-242ENST00000515063 KRTAP4-5Q9BYR2 181 aa4.71□□□□□ -1.66
CAST-242ENST00000515063 IFT22Q9H7X7 185 aa4.71□□□□□ -1.66
CAST-242ENST00000515063 APOBEC2Q9Y235 224 aaKnown RBP4.71□□□□□ -1.66
CAST-242ENST00000515063 SH3BP1Q9Y3L3 701 aa4.71□□□□□ -1.66
CAST-242ENST00000515063 TMEM131LA2VDJ0 1609 aa4.71□□□□□ -1.66
CAST-242ENST00000515063 CGNL1Q0VF96 1302 aa4.71□□□□□ -1.66
CAST-242ENST00000515063 EVC2Q86UK5 1308 aa4.71□□□□□ -1.66
CAST-242ENST00000515063 ZMYM3Q14202 1370 aa4.7□□□□□ -1.66
CAST-242ENST00000515063 GOLGA6L6A8MZA4 724 aa4.7□□□□□ -1.66
CAST-242ENST00000515063 ELL2O00472 640 aaPredicted RBP4.7□□□□□ -1.66
CAST-242ENST00000515063 AKAP8O43823 692 aaKnown RBP4.7□□□□□ -1.66
CAST-242ENST00000515063 GAAP10253 952 aa4.7□□□□□ -1.66
CAST-242ENST00000515063 CPEP16870 476 aa4.7□□□□□ -1.66
CAST-242ENST00000515063 GNAT2P19087 354 aa4.7□□□□□ -1.66
CAST-242ENST00000515063 MCM7P33993 719 aa4.7□□□□□ -1.66
CAST-242ENST00000515063 MAN2A2P49641 1150 aa4.7□□□□□ -1.66
CAST-242ENST00000515063 SESN3P58005 492 aa4.7□□□□□ -1.66
CAST-242ENST00000515063 ADAM8P78325 824 aa4.7□□□□□ -1.66
CAST-242ENST00000515063 MEF2AQ02078 507 aaPredicted RBP4.7□□□□□ -1.66
CAST-242ENST00000515063 ABHD18Q0P651 414 aa4.7□□□□□ -1.66
CAST-242ENST00000515063 ZBTB41Q5SVQ8 909 aa4.7□□□□□ -1.66
CAST-242ENST00000515063 BROXQ5VW32 411 aa4.7□□□□□ -1.66
CAST-242ENST00000515063 CENPQQ7L2Z9 268 aaPredicted RBP4.7□□□□□ -1.66
CAST-242ENST00000515063 TMPRSS6Q8IU80 811 aa4.7□□□□□ -1.66
CAST-242ENST00000515063 ZNF703Q9H7S9 590 aaPredicted RBP4.7□□□□□ -1.66
CAST-242ENST00000515063 CAAP1Q9H8G2 361 aa4.7□□□□□ -1.66
CAST-242ENST00000515063 USP18Q9UMW8 372 aa4.7□□□□□ -1.66
CAST-242ENST00000515063 NOP58Q9Y2X3 529 aaKnown RBP4.7□□□□□ -1.66
CAST-242ENST00000515063 NSD3Q9BZ95 1437 aa4.7□□□□□ -1.66
CAST-242ENST00000515063 ADGRB2O60241 1585 aa4.7□□□□□ -1.66
CAST-242ENST00000515063 IQSEC2Q5JU85 1478 aa4.69□□□□□ -1.66
CAST-242ENST00000515063 DLC1Q96QB1 1528 aa4.69□□□□□ -1.66
CAST-242ENST00000515063 TULP4Q9NRJ4 1543 aa4.69□□□□□ -1.66
CAST-242ENST00000515063 A0A0A6YYK5 440 aaPredicted RBP4.69□□□□□ -1.66
CAST-242ENST00000515063 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.69□□□□□ -1.66
CAST-242ENST00000515063 BRINP1O60477 761 aa4.69□□□□□ -1.66
CAST-242ENST00000515063 ALDH1A2O94788 518 aa4.69□□□□□ -1.66
CAST-242ENST00000515063 SEC24DO94855 1032 aaPredicted RBP4.69□□□□□ -1.66
CAST-242ENST00000515063 ZNF202O95125 648 aa4.69□□□□□ -1.66
CAST-242ENST00000515063 PEX11BO96011 259 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms