RNA–Protein interactions for RNA: ENST00000514493.5

SSBP2-218, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SSBP2, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-218ENST00000514493 ZBTB41Q5SVQ8 909 aa21.42■■□□□ 1.02
SSBP2-218ENST00000514493 USP37Q86T82 979 aa21.42■■□□□ 1.02
SSBP2-218ENST00000514493 TMEM40Q8WWA1 233 aa21.42■■□□□ 1.02
SSBP2-218ENST00000514493 CELF4Q9BZC1 486 aaKnown RBP21.42■■□□□ 1.02
SSBP2-218ENST00000514493 LUC7L2Q9Y383 392 aaKnown RBP21.42■■□□□ 1.02
SSBP2-218ENST00000514493 RNF225M0QZC1 329 aaPredicted RBP21.41■■□□□ 1.02
SSBP2-218ENST00000514493 FGFR4P22455 802 aa21.41■■□□□ 1.02
SSBP2-218ENST00000514493 FECHP22830 423 aa21.41■■□□□ 1.02
SSBP2-218ENST00000514493 ACOT2P49753 483 aa21.41■■□□□ 1.02
SSBP2-218ENST00000514493 DLG4P78352 724 aa21.41■■□□□ 1.02
SSBP2-218ENST00000514493 PTK7Q13308 1070 aa21.41■■□□□ 1.02
SSBP2-218ENST00000514493 C1orf220Q5T0J3 134 aa21.41■■□□□ 1.02
SSBP2-218ENST00000514493 CATSPER4Q7RTX7 472 aa21.41■■□□□ 1.02
SSBP2-218ENST00000514493 PARD3BQ8TEW8 1205 aa21.41■■□□□ 1.02
SSBP2-218ENST00000514493 CPB2Q96IY4 423 aa21.41■■□□□ 1.02
SSBP2-218ENST00000514493 TRMT13Q9NUP7 481 aaKnown RBP21.41■■□□□ 1.02
SSBP2-218ENST00000514493 CDY2AQ9Y6F7 541 aa21.41■■□□□ 1.02
SSBP2-218ENST00000514493 MCF2P10911 925 aa21.41■■□□□ 1.02
SSBP2-218ENST00000514493 MGAT3Q09327 533 aa21.41■■□□□ 1.02
SSBP2-218ENST00000514493 PSMD6Q15008 389 aa21.41■■□□□ 1.02
SSBP2-218ENST00000514493 BRSK2Q8IWQ3 736 aa21.41■■□□□ 1.02
SSBP2-218ENST00000514493 MMRN2Q9H8L6 949 aa21.41■■□□□ 1.02
SSBP2-218ENST00000514493 RBAKQ9NYW8 714 aaPredicted RBP21.41■■□□□ 1.02
SSBP2-218ENST00000514493 NOD1Q9Y239 953 aa21.41■■□□□ 1.02
SSBP2-218ENST00000514493 TRIP11Q15643 1979 aa21.41■■□□□ 1.02
SSBP2-218ENST00000514493 A0A1B0GUA9 196 aa21.4■■□□□ 1.02
SSBP2-218ENST00000514493 LRRIQ3A6PVS8 624 aaPredicted RBP21.4■■□□□ 1.02
SSBP2-218ENST00000514493 N4BP1O75113 896 aaKnown RBP21.4■■□□□ 1.02
SSBP2-218ENST00000514493 MYL7Q01449 175 aa21.4■■□□□ 1.02
SSBP2-218ENST00000514493 KCNMA1Q12791 1236 aa21.4■■□□□ 1.02
SSBP2-218ENST00000514493 CBWD6Q4V339 395 aa21.4■■□□□ 1.02
SSBP2-218ENST00000514493 CBWD3Q5JTY5 395 aa21.4■■□□□ 1.02
SSBP2-218ENST00000514493 CBWD5Q5RIA9 395 aa21.4■■□□□ 1.02
SSBP2-218ENST00000514493 CDR2LQ86X02 465 aaPredicted RBP21.4■■□□□ 1.02
SSBP2-218ENST00000514493 DHX38Q92620 1227 aaKnown RBP21.4■■□□□ 1.02
SSBP2-218ENST00000514493 DNAJC7Q99615 494 aa21.4■■□□□ 1.02
SSBP2-218ENST00000514493 SEZ6LQ9BYH1 1024 aa21.4■■□□□ 1.02
SSBP2-218ENST00000514493 SENP6Q9GZR1 1112 aaPredicted RBP21.4■■□□□ 1.02
SSBP2-218ENST00000514493 FAM207AQ9NSI2 230 aaPredicted RBP21.4■■□□□ 1.02
SSBP2-218ENST00000514493 AGPAT5Q9NUQ2 364 aa21.4■■□□□ 1.02
SSBP2-218ENST00000514493 ARVCFO00192 962 aa21.39■■□□□ 1.01
SSBP2-218ENST00000514493 AXLP30530 894 aa21.39■■□□□ 1.01
SSBP2-218ENST00000514493 ZBED6P86452 979 aa21.39■■□□□ 1.01
SSBP2-218ENST00000514493 PPP3CAQ08209 521 aa21.39■■□□□ 1.01
SSBP2-218ENST00000514493 GBP6Q6ZN66 633 aa21.39■■□□□ 1.01
SSBP2-218ENST00000514493 ZNF397Q8NF99 534 aaPredicted RBP21.39■■□□□ 1.01
SSBP2-218ENST00000514493 NEK11Q8NG66 645 aa21.39■■□□□ 1.01
SSBP2-218ENST00000514493 OR8K1Q8NGG5 319 aa21.39■■□□□ 1.01
SSBP2-218ENST00000514493 CCDC127Q96BQ5 260 aa21.39■■□□□ 1.01
SSBP2-218ENST00000514493 CRACR2AQ9BSW2 395 aa21.39■■□□□ 1.01
SSBP2-218ENST00000514493 KCND1Q9NSA2 647 aa21.39■■□□□ 1.01
SSBP2-218ENST00000514493 GCNT4Q9P109 453 aa21.39■■□□□ 1.01
SSBP2-218ENST00000514493 CPSF3Q9UKF6 684 aaKnown RBP21.39■■□□□ 1.01
SSBP2-218ENST00000514493 PDCD11Q14690 1871 aaKnown RBP21.39■■□□□ 1.01
SSBP2-218ENST00000514493 P4HA2O15460 535 aa21.38■■□□□ 1.01
SSBP2-218ENST00000514493 CTSHP09668 335 aa21.38■■□□□ 1.01
SSBP2-218ENST00000514493 TNFSF9P41273 254 aa21.38■■□□□ 1.01
SSBP2-218ENST00000514493 NCBP1Q09161 790 aaKnown RBP21.38■■□□□ 1.01
SSBP2-218ENST00000514493 EXOC3L4Q17RC7 722 aa21.38■■□□□ 1.01
SSBP2-218ENST00000514493 TRIM71Q2Q1W2 868 aaKnown RBP21.38■■□□□ 1.01
SSBP2-218ENST00000514493 ADPGKQ9BRR6 497 aa21.38■■□□□ 1.01
SSBP2-218ENST00000514493 LSM14BQ9BX40 385 aaKnown RBP21.38■■□□□ 1.01
SSBP2-218ENST00000514493 CRISPLD2Q9H0B8 497 aa21.38■■□□□ 1.01
SSBP2-218ENST00000514493 KIAA0100Q14667 2235 aaKnown RBP21.38■■□□□ 1.01
SSBP2-218ENST00000514493 PMM2O15305 246 aa21.38■■□□□ 1.01
SSBP2-218ENST00000514493 B4GALT4O60513 344 aa21.38■■□□□ 1.01
SSBP2-218ENST00000514493 CAND2O75155 1236 aa21.38■■□□□ 1.01
SSBP2-218ENST00000514493 HOXA11P31270 313 aaPredicted RBP21.38■■□□□ 1.01
SSBP2-218ENST00000514493 GTF2H1P32780 548 aa21.38■■□□□ 1.01
SSBP2-218ENST00000514493 THPOP40225 353 aa21.38■■□□□ 1.01
SSBP2-218ENST00000514493 MXI1P50539 228 aa21.38■■□□□ 1.01
SSBP2-218ENST00000514493 CLDN10P78369 228 aa21.38■■□□□ 1.01
SSBP2-218ENST00000514493 DCAF4L1Q3SXM0 396 aa21.38■■□□□ 1.01
SSBP2-218ENST00000514493 SEZ6Q53EL9 994 aa21.38■■□□□ 1.01
SSBP2-218ENST00000514493 NOTUMQ6P988 496 aa21.38■■□□□ 1.01
SSBP2-218ENST00000514493 EDEM3Q9BZQ6 932 aa21.38■■□□□ 1.01
SSBP2-218ENST00000514493 EPHB6O15197 1021 aa21.37■■□□□ 1.01
SSBP2-218ENST00000514493 CHRNA1P02708 482 aa21.37■■□□□ 1.01
SSBP2-218ENST00000514493 DLATP10515 647 aaKnown RBP21.37■■□□□ 1.01
SSBP2-218ENST00000514493 GCLMP48507 274 aa21.37■■□□□ 1.01
SSBP2-218ENST00000514493 WNT7BP56706 349 aa21.37■■□□□ 1.01
SSBP2-218ENST00000514493 KYAT1Q16773 422 aa21.37■■□□□ 1.01
SSBP2-218ENST00000514493 E4F1Q66K89 784 aaPredicted RBP21.37■■□□□ 1.01
SSBP2-218ENST00000514493 APBB1IPQ7Z5R6 666 aaPredicted RBP21.37■■□□□ 1.01
SSBP2-218ENST00000514493 FAM228AQ86W67 206 aa21.37■■□□□ 1.01
SSBP2-218ENST00000514493 THNSL1Q8IYQ7 743 aa21.37■■□□□ 1.01
SSBP2-218ENST00000514493 CEP120Q8N960 986 aa21.37■■□□□ 1.01
SSBP2-218ENST00000514493 TMEM8AQ9HCN3 771 aa21.37■■□□□ 1.01
SSBP2-218ENST00000514493 PLCB1Q9NQ66 1216 aa21.37■■□□□ 1.01
SSBP2-218ENST00000514493 TSR1Q2NL82 804 aaKnown RBP21.36■■□□□ 1.01
SSBP2-218ENST00000514493 SLC27A1Q6PCB7 646 aa21.36■■□□□ 1.01
SSBP2-218ENST00000514493 TMTC1Q8IUR5 882 aa21.36■■□□□ 1.01
SSBP2-218ENST00000514493 CCAR2Q8N163 923 aaKnown RBP21.36■■□□□ 1.01
SSBP2-218ENST00000514493 U2AF1L4Q8WU68 220 aaKnown RBP21.36■■□□□ 1.01
SSBP2-218ENST00000514493 FNBP1Q96RU3 617 aa21.36■■□□□ 1.01
SSBP2-218ENST00000514493 CGRRF1Q99675 332 aa21.36■■□□□ 1.01
SSBP2-218ENST00000514493 TMEM117Q9H0C3 514 aa21.36■■□□□ 1.01
SSBP2-218ENST00000514493 TRPV6Q9H1D0 765 aa21.36■■□□□ 1.01
SSBP2-218ENST00000514493 PDE11AQ9HCR9 933 aa21.36■■□□□ 1.01
SSBP2-218ENST00000514493 TOPORSQ9NS56 1045 aaPredicted RBP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms