RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 LIG1P18858 919 aa13.49□□□□□ -0.25
SNHG4-208ENST00000514110 CYP11B2P19099 503 aa13.49□□□□□ -0.25
SNHG4-208ENST00000514110 KCNA4P22459 653 aa13.49□□□□□ -0.25
SNHG4-208ENST00000514110 NUBP1P53384 320 aa13.49□□□□□ -0.25
SNHG4-208ENST00000514110 ORC2Q13416 577 aaPredicted RBP13.49□□□□□ -0.25
SNHG4-208ENST00000514110 TUSC3Q13454 348 aa13.49□□□□□ -0.25
SNHG4-208ENST00000514110 PRPF4BQ13523 1007 aaKnown RBP13.49□□□□□ -0.25
SNHG4-208ENST00000514110 TDGQ13569 410 aa13.49□□□□□ -0.25
SNHG4-208ENST00000514110 HSP90AA2PQ14568 343 aaPredicted RBP13.49□□□□□ -0.25
SNHG4-208ENST00000514110 NBR1Q14596 966 aa13.49□□□□□ -0.25
SNHG4-208ENST00000514110 RTP2Q5QGT7 225 aa13.49□□□□□ -0.25
SNHG4-208ENST00000514110 TTC38Q5R3I4 469 aa13.49□□□□□ -0.25
SNHG4-208ENST00000514110 EEF1DP3Q658K8 133 aa13.49□□□□□ -0.25
SNHG4-208ENST00000514110 ASTLQ6HA08 431 aaPredicted RBP13.49□□□□□ -0.25
SNHG4-208ENST00000514110 LILRA6Q6PI73 481 aa13.49□□□□□ -0.25
SNHG4-208ENST00000514110 PRSS55Q6UWB4 352 aaPredicted RBP13.49□□□□□ -0.25
SNHG4-208ENST00000514110 NOSTRINQ8IVI9 506 aa13.49□□□□□ -0.25
SNHG4-208ENST00000514110 GPR65Q8IYL9 337 aa13.49□□□□□ -0.25
SNHG4-208ENST00000514110 ERMNQ8TAM6 284 aa13.49□□□□□ -0.25
SNHG4-208ENST00000514110 HASPINQ8TF76 798 aa13.49□□□□□ -0.25
SNHG4-208ENST00000514110 HDAC7Q8WUI4 952 aa13.49□□□□□ -0.25
SNHG4-208ENST00000514110 SMG7Q92540 1137 aaKnown RBP13.49□□□□□ -0.25
SNHG4-208ENST00000514110 ATOH1Q92858 354 aaPredicted RBP13.49□□□□□ -0.25
SNHG4-208ENST00000514110 MYADMQ96S97 322 aa13.49□□□□□ -0.25
SNHG4-208ENST00000514110 KIFC3Q9BVG8 833 aa13.49□□□□□ -0.25
SNHG4-208ENST00000514110 RHOBTB2Q9BYZ6 727 aa13.49□□□□□ -0.25
SNHG4-208ENST00000514110 C2orf40Q9H1Z8 148 aa13.49□□□□□ -0.25
SNHG4-208ENST00000514110 MFSD1Q9H3U5 465 aa13.49□□□□□ -0.25
SNHG4-208ENST00000514110 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.49□□□□□ -0.25
SNHG4-208ENST00000514110 FNIP2Q9P278 1114 aa13.49□□□□□ -0.25
SNHG4-208ENST00000514110 DPP7Q9UHL4 492 aa13.49□□□□□ -0.25
SNHG4-208ENST00000514110 DUSP12Q9UNI6 340 aa13.49□□□□□ -0.25
SNHG4-208ENST00000514110 ACKR2O00590 384 aa13.48□□□□□ -0.25
SNHG4-208ENST00000514110 NARSO43776 548 aaKnown RBP13.48□□□□□ -0.25
SNHG4-208ENST00000514110 GBP2P32456 591 aaPredicted RBP13.48□□□□□ -0.25
SNHG4-208ENST00000514110 CCT6AP40227 531 aaKnown RBP13.48□□□□□ -0.25
SNHG4-208ENST00000514110 NAMPTP43490 491 aa13.48□□□□□ -0.25
SNHG4-208ENST00000514110 NAB2Q15742 525 aa13.48□□□□□ -0.25
SNHG4-208ENST00000514110 MAPK6Q16659 721 aa13.48□□□□□ -0.25
SNHG4-208ENST00000514110 TMEM132AQ24JP5 1023 aa13.48□□□□□ -0.25
SNHG4-208ENST00000514110 CWF19L1Q69YN2 538 aaKnown RBP13.48□□□□□ -0.25
SNHG4-208ENST00000514110 ELMSAN1Q6PJG2 1045 aa13.48□□□□□ -0.25
SNHG4-208ENST00000514110 CYP26C1Q6V0L0 522 aa13.48□□□□□ -0.25
SNHG4-208ENST00000514110 DEPTORQ8TB45 409 aa13.48□□□□□ -0.25
SNHG4-208ENST00000514110 RSAD2Q8WXG1 361 aa13.48□□□□□ -0.25
SNHG4-208ENST00000514110 KIF2CQ99661 725 aa13.48□□□□□ -0.25
SNHG4-208ENST00000514110 NT5C3AQ9H0P0 336 aa13.48□□□□□ -0.25
SNHG4-208ENST00000514110 PLEKHA4Q9H4M7 779 aa13.48□□□□□ -0.25
SNHG4-208ENST00000514110 MTCL1Q9Y4B5 1905 aaKnown RBP13.47□□□□□ -0.25
SNHG4-208ENST00000514110 SF3B1O75533 1304 aaKnown RBP eCLIP13.47□□□□□ -0.254e-7■■■□□ 15.8
SNHG4-208ENST00000514110 KIF4AO95239 1232 aa13.47□□□□□ -0.25
SNHG4-208ENST00000514110 C1RP00736 705 aa13.47□□□□□ -0.25
SNHG4-208ENST00000514110 THP07101 528 aa13.47□□□□□ -0.25
SNHG4-208ENST00000514110 NPR3P17342 541 aa13.47□□□□□ -0.25
SNHG4-208ENST00000514110 MUTP22033 750 aa13.47□□□□□ -0.25
SNHG4-208ENST00000514110 IGFBP6P24592 240 aaPredicted RBP13.47□□□□□ -0.25
SNHG4-208ENST00000514110 RBM25P49756 843 aaKnown RBP13.47□□□□□ -0.25
SNHG4-208ENST00000514110 FXR2P51116 673 aaKnown RBP eCLIP13.47□□□□□ -0.25
SNHG4-208ENST00000514110 CLCN5P51795 746 aa13.47□□□□□ -0.25
SNHG4-208ENST00000514110 HMGN5P82970 282 aaKnown RBP13.47□□□□□ -0.25
SNHG4-208ENST00000514110 GNL2Q13823 731 aaKnown RBP13.47□□□□□ -0.25
SNHG4-208ENST00000514110 NT5DC1Q5TFE4 455 aa13.47□□□□□ -0.25
SNHG4-208ENST00000514110 FAM171A1Q5VUB5 890 aa13.47□□□□□ -0.25
SNHG4-208ENST00000514110 STAMQ92783 540 aa13.47□□□□□ -0.25
SNHG4-208ENST00000514110 IRF2BPLQ9H1B7 796 aa13.47□□□□□ -0.25
SNHG4-208ENST00000514110 BHMT2Q9H2M3 363 aa13.47□□□□□ -0.25
SNHG4-208ENST00000514110 ZDHHC7Q9NXF8 308 aa13.47□□□□□ -0.25
SNHG4-208ENST00000514110 IGSF9Q9P2J2 1179 aa13.47□□□□□ -0.25
SNHG4-208ENST00000514110 EPS15L1Q9UBC2 864 aa13.47□□□□□ -0.25
SNHG4-208ENST00000514110 GDAQ9Y2T3 454 aa13.47□□□□□ -0.25
SNHG4-208ENST00000514110 MYO15AQ9UKN7 3530 aa13.46□□□□□ -0.25
SNHG4-208ENST00000514110 PI15O43692 258 aa13.46□□□□□ -0.25
SNHG4-208ENST00000514110 ZMYND10O75800 440 aa13.46□□□□□ -0.25
SNHG4-208ENST00000514110 TRAPPC10P48553 1259 aa13.46□□□□□ -0.25
SNHG4-208ENST00000514110 TOB1P50616 345 aaPredicted RBP13.46□□□□□ -0.25
SNHG4-208ENST00000514110 CREMQ03060 361 aa13.46□□□□□ -0.25
SNHG4-208ENST00000514110 PPP2R5AQ15172 486 aa13.46□□□□□ -0.25
SNHG4-208ENST00000514110 HAUS3Q68CZ6 603 aa13.46□□□□□ -0.25
SNHG4-208ENST00000514110 CEP57Q86XR8 500 aa13.46□□□□□ -0.25
SNHG4-208ENST00000514110 SIX5Q8N196 739 aa13.46□□□□□ -0.25
SNHG4-208ENST00000514110 FAM184AQ8NB25 1140 aa13.46□□□□□ -0.25
SNHG4-208ENST00000514110 FLCNQ8NFG4 579 aa13.46□□□□□ -0.25
SNHG4-208ENST00000514110 LNX1Q8TBB1 728 aaPredicted RBP13.46□□□□□ -0.25
SNHG4-208ENST00000514110 ZSCAN31Q96LW9 406 aaPredicted RBP13.46□□□□□ -0.25
SNHG4-208ENST00000514110 CLSTN3Q9BQT9 956 aa13.46□□□□□ -0.25
SNHG4-208ENST00000514110 ADPGKQ9BRR6 497 aa13.46□□□□□ -0.25
SNHG4-208ENST00000514110 TTPALQ9BTX7 342 aa13.46□□□□□ -0.25
SNHG4-208ENST00000514110 PRKD2Q9BZL6 878 aa13.46□□□□□ -0.25
SNHG4-208ENST00000514110 PIDD1Q9HB75 910 aa13.46□□□□□ -0.25
SNHG4-208ENST00000514110 LRWD1Q9UFC0 647 aa13.46□□□□□ -0.25
SNHG4-208ENST00000514110 FBXL21Q9UKT6 434 aa13.46□□□□□ -0.25
SNHG4-208ENST00000514110 KIAA1024Q9UPX6 916 aa13.46□□□□□ -0.25
SNHG4-208ENST00000514110 PP2D1A8MPX8 630 aa13.45□□□□□ -0.26
SNHG4-208ENST00000514110 ADAM12O43184 909 aa13.45□□□□□ -0.26
SNHG4-208ENST00000514110 GFRA3O60609 400 aa13.45□□□□□ -0.26
SNHG4-208ENST00000514110 U2AF2P26368 475 aaKnown RBP eCLIP13.45□□□□□ -0.26
SNHG4-208ENST00000514110 EFNA5P52803 228 aa13.45□□□□□ -0.26
SNHG4-208ENST00000514110 PSMD5Q16401 504 aa13.45□□□□□ -0.26
SNHG4-208ENST00000514110 GET4Q7L5D6 327 aaPredicted RBP13.45□□□□□ -0.26
SNHG4-208ENST00000514110 IGSF22Q8N9C0 903 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms